Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307F02f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128332-1|BAC87388.1|  154|Homo sapiens protein ( Homo sapiens ...    32   1.1  
AK127023-1|BAC86792.1|  154|Homo sapiens protein ( Homo sapiens ...    32   1.1  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    30   4.3  

>AK128332-1|BAC87388.1|  154|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46474 fis, clone THYMU3024164. ).
          Length = 154

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
 Frame = -1

Query: 311 TIMRVRAFCHRQQAKRQPFCIHVYKL-HACVLFSFLQHL---*MHLHITLCI 168
           T MR+    H       P C HV+ L H C+  +   HL     HLH  +CI
Sbjct: 14  TYMRLHPLAHPHTCALAPICTHVHTLAHMCICRNAPLHLCDTPAHLHTPICI 65


>AK127023-1|BAC86792.1|  154|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45079 fis, clone BRAWH3027675. ).
          Length = 154

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
 Frame = -1

Query: 311 TIMRVRAFCHRQQAKRQPFCIHVYKL-HACVLFSFLQHL---*MHLHITLCI 168
           T MR+    H       P C HV+ L H C+  +   HL     HLH  +CI
Sbjct: 14  TYMRLHPLAHPHTCALAPICTHVHTLAHMCICRNAPLHLCDTPAHLHTPICI 65


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 254 CIHVYK-LHACVLFSFLQHL*MHLHITLCISPVIIHKLPHAILY 126
           CIH+Y  +H C+      ++ +++HI +CI  V ++   H   Y
Sbjct: 187 CIHMYTCIHRCIFIYTYVYICVYIHIYICIH-VCVYSYIHMYTY 229


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,530,312
Number of Sequences: 237096
Number of extensions: 1224276
Number of successful extensions: 5664
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5663
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)