Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E12f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23936| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 33 0.14
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 31 0.76
SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 29 1.8
SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_22858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_46762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51704| Best HMM Match : F-box (HMM E-Value=3.3e-05) 28 4.1
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 28 5.4
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_57670| Best HMM Match : LON (HMM E-Value=6.8e-07) 28 5.4
SB_58417| Best HMM Match : zf-CCCH (HMM E-Value=0.96) 27 7.1
SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_17349| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_19440| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_10315| Best HMM Match : Pentaxin (HMM E-Value=5e-12) 27 9.4
>SB_23936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 33.9 bits (74), Expect = 0.082
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 63 PRTTVTRNCCCWNRNYKQSALRMNSFKVQYVIALCIVAAVG 185
P+T CCCW+R YK + + Q IA ++ G
Sbjct: 6 PKTRTKGQCCCWSRRYKDIKAKQIQLRYQKEIANTVIRLGG 46
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 3 GPYVAM-EGPYVAMEGPYVAMEGPYVAMGGPYVAMEGPYV 41
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 17 GPYVAM-EGPYVAMGGPYVAMEGPYVAMGGPYVAMGGPYV 55
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 204 GPYVAM-EGPYVAMGGPYVAMEGPYVAMEGPYVAMGGPYV 242
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYVG 356
G Y+ EG Y+ + PY+ ++ PY GPY PY G
Sbjct: 225 GPYVAM-EGPYVAMGGPYVAMEGPYVAMEGPYVAMEGPYGG 264
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 255 EGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 305 EGPYVAMEGPYVAMEGPYVAMGGPYVAMEGPYV 337
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 313 GPYVAM-EGPYVAMGGPYVAMEGPYVAMGGPYVAMGGPYV 351
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 255 EGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 2 EGPYVAMEGPYVAMEGPYVAMEGPYVAMGGPYV 34
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 197 GPYVAM-EGPYVAMEGPYVAMGGPYVAMEGPYVAMEGPYV 235
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 218 GPYVAM-EGPYVAMEGPYVAMGGPYVAMEGPYVAMEGPYV 256
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 10 GPYVAM-EGPYVAMEGPYVAMGGPYVAMEGPYVAMGGPYV 48
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 31 GPYVAM-EGPYVAMGGPYVAMGGPYVAMGGPYVAMEGPYV 69
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 306 GPYVAM-EGPYVAMEGPYVAMGGPYVAMEGPYVAMGGPYV 344
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ G Y+ + PY+ + PY GPY PYV
Sbjct: 38 GPYVAMG-GPYVAMGGPYVAMGGPYVAMEGPYVAMEGPYV 76
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPY 329
G Y+ EG Y+ + PY+ ++ PY GPY
Sbjct: 264 GPYVAM-EGPYVAMGGPYVAMEGPYVAMGGPY 294
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG Y+ + PY+ ++ P GPY PYV
Sbjct: 278 GPYVAM-EGPYVAMGGPYVAMEGPNVAMEGPYVAMEGPYV 316
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ EG + + PY+ ++ PY GPY PYV
Sbjct: 292 GPYVAM-EGPNVAMEGPYVAMEGPYVAMEGPYVAMGGPYV 330
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 234 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDY 341
G Y+ G Y+ + PY+ ++ PY GPY Y
Sbjct: 232 GPYVAMG-GPYVAMEGPYVAMEGPYVAMEGPYGGPY 266
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 258 GKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G Y+ + PY+ + PY GPY PYV
Sbjct: 264 GPYVAMEGPYVAMGGPYVAMEGPYVAMGGPYV 295
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 30.7 bits (66), Expect = 0.76
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 201 GKWHPYHYGDSGKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDY 341
G+ Y G S +Y+P EG Y +P PY + GGFG Y
Sbjct: 436 GQPDSYRAG-SKEYVPQPEG-YSAVPGPYQSYGRGWQGGFGQVQPSY 480
>SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +3
Query: 204 KWHPYHYGDSGKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYR 383
K H Y D Y PY + Y PY H PY+ AT Y+
Sbjct: 41 KNHATPYKDHATPYKDHATPYKDHATPYKDLATSYKDHVTPYKHLATPYIDYAT---PYK 97
Query: 384 LILTPPKDIPF-YKD 425
+ TP KD+ YKD
Sbjct: 98 DLATPYKDLATPYKD 112
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +3
Query: 264 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYR 383
Y H+ PY H+ Y + YAH Y Y YR
Sbjct: 761 YAHVYRPYAHVYRTYARVYRTYAHLYRTYAHGTEHMHVYR 800
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/41 (29%), Positives = 16/41 (39%)
Frame = +3
Query: 228 DSGKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPY 350
DS + Y H+ Y H+ Y + YAH Y Y
Sbjct: 721 DSSRTYSLQYRPYAHVYRTYAHVYRTYARVYRTYAHVYRTY 761
>SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 264 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDIPF-YKDGYYKN 440
Y+ + PY+ + PY G PY PYV + TV Y + P D+ Y D K
Sbjct: 216 YVDVTVPYVDVTVPYVDGTVPYVDVTVPYV-DVTV--PYVDVTVPYVDVTVPYIDVTLKP 272
Query: 441 NGIKI 455
GI +
Sbjct: 273 TGIPL 277
>SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 327 YAHDYEPYVGEATVQDQYRLILTPPKDIPFYKDGYYKNN 443
Y + EP +GEAT++ R + PP + P Y Y N
Sbjct: 333 YLNRQEPGLGEATLRHLLRPRVDPPHEHPAYDYDYIHEN 371
>SB_22858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1404
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +3
Query: 288 IHIDNPYDGGFGPY-----AHDYEPYVGEATVQDQYRLILTPPKDIPFYKDGYYKNNGIK 452
I+ +NP +G Y + +Y P++ + Q + PP+ P + + +
Sbjct: 276 IYDENPSPEAYGEYFLMNPSKEYAPFIHTMREKIQLSKVSVPPEGCPSFTEDSLLRHAQF 335
Query: 453 IIKQKHNYD 479
+++Q NYD
Sbjct: 336 LVEQIENYD 344
>SB_46762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 219 HYGDSGKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
++ + YI T+ YI+I PYI+I+ PY Y PY+
Sbjct: 53 YFDTNWPYINTNR-PYININRPYININRPYINTSRAYFDTNWPYI 96
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 240 YIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
Y+ T+ YI+ PYI+ + PY PY + PY+
Sbjct: 11 YVNTNR-PYINTNRPYINTNRPYINTNRPYININRPYI 47
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 240 YIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
YI T+ YI+I PYI+ Y PY + PY+
Sbjct: 32 YINTNR-PYININRPYINTSRAYFDTNWPYINTNRPYI 68
>SB_51704| Best HMM Match : F-box (HMM E-Value=3.3e-05)
Length = 337
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 360 PRQHRVHSRVHMVQSHHRKGYQCECKGWE 274
PR +V +V MV H R Y C GW+
Sbjct: 236 PRHSKVIYKVGMVMRHRRYHYGCVIWGWD 264
>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 249 TDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYRLIL--TPPKDIPF 416
T+ KY H N + I N G Y +G+ TV + R+ + +PP+DI F
Sbjct: 750 TNRNKYTHFNNGSLKIMNLEKEDTGKYMCTASNTLGKQTVMRRLRVQIPPSPPQDIAF 807
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 264 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDIP 413
Y +P+PY + +PY PY PY V Y+ + P K +P
Sbjct: 672 YKQVPHPYKQVPHPYKQVPAPYKQVPLPY---KQVPPPYKQVPHPYKQVP 718
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 264 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDIP 413
Y +P+PY + PY PY PY V Y+ + P K +P
Sbjct: 735 YKQVPHPYKQVPPPYKQVPPPYKQVPHPY---KQVPAPYKQVPAPYKQVP 781
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 27.9 bits (59), Expect = 5.4
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 183 GVPVEDGKWHPYHYGDSGKYIPTDEGKYIH---IPNPYIHIDNPYDGGFGPYAHDYEPYV 353
G P DG PY D +I T G+ +H +P + NP GPY HD P++
Sbjct: 840 GPPRRDG---PYR--DEPGFIDTPMGRGMHQRDMPPEWHPAGNPRRVDEGPYMHDGPPHI 894
Query: 354 GEATVQDQYRLILTPPKDIPFYKDGYYKNN 443
+++ I P +IP G ++ +
Sbjct: 895 ------NRHPFIEQGPVEIPISHSGPWQGD 918
>SB_57670| Best HMM Match : LON (HMM E-Value=6.8e-07)
Length = 224
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 116 KCIKDEFVQGAVCDCAMHRSRGGCTC*GWKMASLPLR 226
KCI D CD MH + G W +A+LPL+
Sbjct: 147 KCITDAIGPMPNCDPNMHVQQDGPEWVWWSLAALPLQ 183
>SB_58417| Best HMM Match : zf-CCCH (HMM E-Value=0.96)
Length = 210
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 54 LPVPRTTVTRNCCCWNR 104
LP PR+ T NC WNR
Sbjct: 137 LPQPRSRSTTNCISWNR 153
>SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 264 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 353
Y+ + PY+ + PY G PY PYV
Sbjct: 216 YVDVTVPYVDVTVPYVDGTVPYVDVTVPYV 245
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 399 PKDIPFYKDGYYKNNGIKIIKQKHN 473
P D+ F YY NNG K KQ+H+
Sbjct: 139 PGDLVFITATYYVNNGKKWKKQRHD 163
>SB_17349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 16 NEFPHSDLASCSAYQCP 66
NE P SD A AYQCP
Sbjct: 25 NEIPDSDPAPAPAYQCP 41
>SB_19440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 261 KYIHIPNPYIHIDNPYDGGFGPYAHDYEPYVG 356
KY+ + + Y+ + + Y G + Y Y YVG
Sbjct: 13 KYVRVYHEYVRVYHEYVGVYPKYVGVYHEYVG 44
>SB_10315| Best HMM Match : Pentaxin (HMM E-Value=5e-12)
Length = 697
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 183 GVPVEDGKWHPYHYG 227
G PV DGKWH HYG
Sbjct: 370 GPPVVDGKWH--HYG 382
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,811,095
Number of Sequences: 59808
Number of extensions: 391665
Number of successful extensions: 1253
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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