Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   1.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.7  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   8.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.2  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 231 NRRNGKDAIFHPQQVHPPRLRCIAQSHTA 145
           NRRN +++  + Q VH P+     Q H A
Sbjct: 204 NRRNERESTQYQQSVHQPQQSSRDQQHGA 232


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 105  NYKQSALRMNSFKVQYVIALCIVAAVGVPVEDGKWHPYHYG-DSGKYI 245
            NY + A +++   VQ  IA        +P +DG     HY   + KY+
Sbjct: 936  NYDRGATQVSKQTVQIPIANFDTYEYDMPTKDGDVFKLHYKVQNNKYV 983


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +3

Query: 354 GEATVQDQYRLILTPPKDIPFYKDGYYKNNGIKIIKQ 464
           G    +D +RL L   + +P+  DG+ + N  + +++
Sbjct: 195 GYDAAKDGHRLELVAEQSVPYNYDGWVELNATQAMQR 231


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 99  NRNYKQSALRMNSFKVQYVIALCIVAAVGVPVEDGKW 209
           NR+     L +N+ +V+      +V    VP  +G W
Sbjct: 9   NRSRSAQDLALNTMRVERADVCLMVELHSVPRNNGNW 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,086
Number of Sequences: 2352
Number of extensions: 12434
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)