Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001393-1|AAN71148.1|  420|Drosophila melanogaster GH05251p pro...   133   2e-31
AE014297-3569|AAF56313.1|  816|Drosophila melanogaster CG6643-PA...   133   2e-31
AE014297-3568|AAN14000.2|  849|Drosophila melanogaster CG6643-PB...   133   2e-31
AE014296-941|AAF50791.1|  253|Drosophila melanogaster CG10677-PA...    28   8.8  
AE013599-852|AAF58947.2| 1290|Drosophila melanogaster CG8799-PA ...    28   8.8  

>BT001393-1|AAN71148.1|  420|Drosophila melanogaster GH05251p
           protein.
          Length = 420

 Score =  133 bits (321), Expect = 2e-31
 Identities = 65/97 (67%), Positives = 78/97 (80%)
 Frame = +2

Query: 188 GASKTALPPGSDDGNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQW 367
           G S  A    SDD NS+FS+ YT  KKV+IVG++YLVGYM WSVAWLI PVILSV RDQ 
Sbjct: 25  GNSIVATKSVSDD-NSIFSVFYTLGKKVAIVGSIYLVGYMGWSVAWLIAPVILSVARDQL 83

Query: 368 RKENEYKRNIAKVAALSSEKDVILARLDDLPSWVFFP 478
            K +E KR+IAK +AL+SEKDVILAR+D+LP+WV+FP
Sbjct: 84  AKTSEKKRDIAKASALASEKDVILARIDELPAWVYFP 120



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 477 PDVERAEWLNRILLQ 521
           PDVER EWLN+IL Q
Sbjct: 120 PDVERCEWLNKILKQ 134


>AE014297-3569|AAF56313.1|  816|Drosophila melanogaster CG6643-PA,
           isoform A protein.
          Length = 816

 Score =  133 bits (321), Expect = 2e-31
 Identities = 65/97 (67%), Positives = 78/97 (80%)
 Frame = +2

Query: 188 GASKTALPPGSDDGNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQW 367
           G S  A    SDD NS+FS+ YT  KKV+IVG++YLVGYM WSVAWLI PVILSV RDQ 
Sbjct: 25  GNSIVATKSVSDD-NSIFSVFYTLGKKVAIVGSIYLVGYMGWSVAWLIAPVILSVARDQL 83

Query: 368 RKENEYKRNIAKVAALSSEKDVILARLDDLPSWVFFP 478
            K +E KR+IAK +AL+SEKDVILAR+D+LP+WV+FP
Sbjct: 84  AKTSEKKRDIAKASALASEKDVILARIDELPAWVYFP 120



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 477 PDVERAEWLNRILLQ 521
           PDVER EWLN+IL Q
Sbjct: 120 PDVERCEWLNKILKQ 134


>AE014297-3568|AAN14000.2|  849|Drosophila melanogaster CG6643-PB,
           isoform B protein.
          Length = 849

 Score =  133 bits (321), Expect = 2e-31
 Identities = 65/97 (67%), Positives = 78/97 (80%)
 Frame = +2

Query: 188 GASKTALPPGSDDGNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQW 367
           G S  A    SDD NS+FS+ YT  KKV+IVG++YLVGYM WSVAWLI PVILSV RDQ 
Sbjct: 58  GNSIVATKSVSDD-NSIFSVFYTLGKKVAIVGSIYLVGYMGWSVAWLIAPVILSVARDQL 116

Query: 368 RKENEYKRNIAKVAALSSEKDVILARLDDLPSWVFFP 478
            K +E KR+IAK +AL+SEKDVILAR+D+LP+WV+FP
Sbjct: 117 AKTSEKKRDIAKASALASEKDVILARIDELPAWVYFP 153



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 477 PDVERAEWLNRILLQ 521
           PDVER EWLN+IL Q
Sbjct: 153 PDVERCEWLNKILKQ 167


>AE014296-941|AAF50791.1|  253|Drosophila melanogaster CG10677-PA
           protein.
          Length = 253

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 477 GKNTHEGKSSSLASITSFSE-DSAATFAMLRLYSFSLR 367
           GKNTHE     L +  +FS   SAAT A+   +S S R
Sbjct: 99  GKNTHEHTLVCLQTFATFSSATSAATLALTISFSASSR 136


>AE013599-852|AAF58947.2| 1290|Drosophila melanogaster CG8799-PA
           protein.
          Length = 1290

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -2

Query: 292 VHSSYNRHLFEKCV--HHRKNTVAIIT 218
           V +S  RHLF++CV  H R +TV ++T
Sbjct: 571 VDASVARHLFDQCVRGHLRGSTVVLVT 597


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,794,536
Number of Sequences: 53049
Number of extensions: 486977
Number of successful extensions: 1236
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)