Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E10f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 171 1e-42
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 171 1e-42
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 171 1e-42
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 171 1e-42
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 169 4e-42
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 168 1e-41
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 166 4e-41
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 137 3e-32
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 57 4e-08
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 57 4e-08
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 57 4e-08
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.028
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.028
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 38 0.028
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 38 0.028
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 38 0.028
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 38 0.028
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 1.9
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 1.9
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 1.9
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 1.9
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 1.9
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 31 2.4
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 31 2.4
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 31 2.4
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 3.2
AY092033-1|AAM14669.1| 922|Homo sapiens NALP3 intermediate isof... 29 9.9
AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform prot... 29 9.9
AF418985-1|AAL14640.2| 719|Homo sapiens NALP3 short isoform pro... 29 9.9
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 171 bits (416), Expect = 1e-42
Identities = 81/142 (57%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 169 bits (412), Expect = 4e-42
Identities = 80/142 (56%), Positives = 103/142 (72%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG++ +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYERVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 168 bits (408), Expect = 1e-41
Identities = 80/142 (56%), Positives = 102/142 (71%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ F QAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAEKVKAFLADPSAF 275
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 166 bits (404), Expect = 4e-41
Identities = 79/142 (55%), Positives = 101/142 (71%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
+ FFQAL I T IS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+
Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVF 193
Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
D+G+I+ PE+LD E L ++F GV NVA++ L GYPT+AS PHSI NG+K +L
Sbjct: 194 DNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSV 253
Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
K F+ DPS F
Sbjct: 254 ETDYTFPLAENVKAFLADPSAF 275
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 137 bits (331), Expect = 3e-32
Identities = 65/114 (57%), Positives = 81/114 (71%)
Frame = +3
Query: 87 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVAN 266
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 267 VAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 428
VA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 115
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 56.8 bits (131), Expect = 4e-08
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 255 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 428
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 213
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEII 68
+ FFQAL I T IS+GTIEI+
Sbjct: 134 KTSFFQALGITTKISRGTIEIL 155
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 56.8 bits (131), Expect = 4e-08
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 255 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 428
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 212
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 3 RAEFFQALSIPTXISKGTIEII 68
+ FFQAL I T IS+GTIEI+
Sbjct: 133 KTSFFQALGITTKISRGTIEIL 154
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 56.8 bits (131), Expect = 4e-08
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 255 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 428
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 58
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 24 LSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 203
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 204 PEILDIKPE 230
++ D PE
Sbjct: 216 QQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 24 LSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 203
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 204 PEILDIKPE 230
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 24 LSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 203
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 204 PEILDIKPE 230
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 24 LSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 203
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 204 PEILDIKPE 230
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 37.5 bits (83), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 24 LSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 203
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 204 PEILDIKPE 230
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 24 LSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 203
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 204 PEILDIKPE 230
++ D PE
Sbjct: 216 QQMGDDLPE 224
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 271 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 92
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 249 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 307
Query: 91 GFKMCTSL 68
G +S+
Sbjct: 308 GLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 271 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 92
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 91 GFKMCTSL 68
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 271 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 92
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 91 GFKMCTSL 68
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 271 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 92
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 91 GFKMCTSL 68
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 271 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 92
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 91 GFKMCTSL 68
G +S+
Sbjct: 273 GLSTSSSV 280
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 105 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 281
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 105 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 281
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 105 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 281
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 139
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 187 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 68
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AY092033-1|AAM14669.1| 922|Homo sapiens NALP3 intermediate isoform
protein.
Length = 922
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 250 WNLARRSSGLMSRISGAKIVPESYTCLTTRP 158
W+ A R L+S + K++PE+ +TTRP
Sbjct: 322 WHKAERGDILLSSLIRKKLLPEASLLITTRP 352
>AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform
protein.
Length = 1036
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 250 WNLARRSSGLMSRISGAKIVPESYTCLTTRP 158
W+ A R L+S + K++PE+ +TTRP
Sbjct: 322 WHKAERGDILLSSLIRKKLLPEASLLITTRP 352
>AF418985-1|AAL14640.2| 719|Homo sapiens NALP3 short isoform
protein.
Length = 719
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 250 WNLARRSSGLMSRISGAKIVPESYTCLTTRP 158
W+ A R L+S + K++PE+ +TTRP
Sbjct: 322 WHKAERGDILLSSLIRKKLLPEASLLITTRP 352
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,100,197
Number of Sequences: 237096
Number of extensions: 1302792
Number of successful extensions: 3173
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3172
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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