Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   180   4e-46
Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  180 bits (439), Expect = 4e-46
 Identities = 82/142 (57%), Positives = 106/142 (74%)
 Frame = +3

Query: 3   RAEFFQALSIPTXISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 182
           +  FFQAL IPT I++GTIEI+NDVH++K GDKVGASE+ LLNML ++PFSYGLVV+QVY
Sbjct: 134 KTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVY 193

Query: 183 DSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXX 362
           D GT++ PE+LD+  E+LR +F +GV NVA++SLA+ YPT+AS  HS+ANG +N+L    
Sbjct: 194 DDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAA 253

Query: 363 XXXXXXXXXXXXKEFIKDPSKF 428
                       K FI DPSKF
Sbjct: 254 VTDVSFKEAETIKAFIADPSKF 275


>Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +3

Query: 105 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSL 284
           G S+ +L   L+     +G  V ++ D G++ A  + + +    R    AG A     SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629

Query: 285 A 287
           A
Sbjct: 630 A 630


>Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +3

Query: 105 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSL 284
           G S+ +L   L+     +G  V ++ D G++ A  + + +    R    AG A     SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629

Query: 285 A 287
           A
Sbjct: 630 A 630


>Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical
           protein H15N14.2b protein.
          Length = 758

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +3

Query: 105 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSL 284
           G S+ +L   L+     +G  V ++ D G++ A  + + +    R    AG A     SL
Sbjct: 504 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 563

Query: 285 A 287
           A
Sbjct: 564 A 564


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,032,883
Number of Sequences: 27780
Number of extensions: 199043
Number of successful extensions: 520
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)