Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E10f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.36 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.36 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   4.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.7  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 93  GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAP 206
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 93  GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAP 206
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 335 TIGNGMRG*SNSWVTNSQRKSSYISNSSLELGTEIF 228
           T+ NG+ G + S VTN+   S  +S+    + TE F
Sbjct: 251 TVKNGIYGIALSPVTNNLYYSPLLSHGLYYVDTEQF 286


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 95  TGLQDVYIVDDFN 57
           TG+ D+++ DD N
Sbjct: 114 TGISDLFVFDDLN 126


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 266 ISNSSLELGTEIFWFDVQNFRCKNSSRIIYLLNNK 162
           +SN   ++    F FD  NFR  N++    +LN +
Sbjct: 381 LSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTR 415


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 266 ISNSSLELGTEIFWFDVQNFRCKNSSRIIYLLNNK 162
           +SN   ++    F FD  NFR  N++    +LN +
Sbjct: 381 LSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTR 415


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 266 ISNSSLELGTEIFWFDVQNFRCKNSSRIIYLLNNK 162
           +SN   ++    F FD  NFR  N++    +LN +
Sbjct: 381 LSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTR 415


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 57  IEIINDVHILKPGDKVGASEATLLN 131
           I I+N  HIL+   K G S   L+N
Sbjct: 480 IGIVNQFHILQFITKNGTSNNYLIN 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,739
Number of Sequences: 438
Number of extensions: 2271
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)