Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E08f
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 3/37 (8%)
 Frame = +2

Query: 350 CPGTTTSGRASVS---C*PPTCPGTGACIQSQTGHIC 451
           CP  T      ++   C P  C   G C+    G  C
Sbjct: 248 CPSGTLGYICEINVDDCRPGACHNNGTCLDKVGGFEC 284


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = +1

Query: 103 KRLVVSWPRVVRAGVSESGFGFVASSCVNAVYW 201
           KR +V  P      V + GF  +     N  YW
Sbjct: 568 KRNLVDAPLKDTVTVPDGGFTIIRFKATNPGYW 600


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 40  EVLPPVKSIILILFVFLCNNTK 105
           EVL P+ +++ I+ +F   NT+
Sbjct: 62  EVLKPIYALMRIVGIFPIKNTE 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,739
Number of Sequences: 336
Number of extensions: 2269
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)