Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E08f
(494 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 67 8e-12
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 67 8e-12
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 62 2e-10
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 62 2e-10
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 60 9e-10
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 29 1.9
AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical ... 29 1.9
AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical... 29 1.9
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 28 4.3
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr... 27 9.9
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 9.9
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 9.9
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 9.9
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 9.9
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 9.9
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 66.9 bits (156), Expect = 8e-12
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = -1
Query: 455 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQ 276
ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK SL G++
Sbjct: 66 ECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLE 124
Query: 275 K--YIQATDLSEASQEAVEEKLRATHR 201
+QA+++S+ +++V+ L + R
Sbjct: 125 SLFQVQASEMSDLDEKSVKSDLMSNQR 151
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 66.9 bits (156), Expect = 8e-12
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = -1
Query: 455 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQ 276
ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK SL G++
Sbjct: 66 ECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLE 124
Query: 275 K--YIQATDLSEASQEAVEEKLRATHR 201
+QA+++S+ +++V+ L + R
Sbjct: 125 SLFQVQASEMSDLDEKSVKSDLMSNQR 151
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -1
Query: 455 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGV 279
+CRY +FDF++T G SK K+ + CPD A +KKKM+Y+SS A+K SL G
Sbjct: 79 DCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGK 137
Query: 278 QKYIQATDLSEASQEAVEEKL 216
Q +D SE S + + KL
Sbjct: 138 ILQFQVSDESEMSHKELLNKL 158
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -1
Query: 455 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGV 279
+CRY +FDF++T G SK K+ + CPD A +KKKM+Y+SS A+K SL G
Sbjct: 79 DCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGK 137
Query: 278 QKYIQATDLSEASQEAVEEKL 216
Q +D SE S + + KL
Sbjct: 138 ILQFQVSDESEMSHKELLNKL 158
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 60.1 bits (139), Expect = 9e-10
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = -1
Query: 455 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGV 279
+CRY +FDF++T G SK K+ + CPD A +KKKM+Y+SS A+K SL G
Sbjct: 79 DCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGK 137
Query: 278 QKYIQATDLSEASQE 234
Q +D SE S +
Sbjct: 138 ILQFQVSDESEMSHK 152
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = -1
Query: 416 QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEA 243
Q SE S K+ L++ CPD A V+++MLY+SS ALK SL G++ +QA+++S+
Sbjct: 142 QVSDESEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 197
Query: 242 SQEAVEEKLRATHR 201
+++V+ L + R
Sbjct: 198 DEKSVKSDLMSNQR 211
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 243 RFREVGRLDVLLNSDKGLFQSVERARVQHLLLD 341
RF E+G++D+ NS G+ + ++ V +LLD
Sbjct: 1828 RFLEIGKVDLSQNSSLGMAKLLDNVSVHGILLD 1860
>AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical
protein Y54F10AM.6 protein.
Length = 254
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 132 RQGRSVGERVRFRRELVCKCC 194
R+GR G+ ++FR E VC+CC
Sbjct: 196 RKGR--GKNIKFRTEKVCRCC 214
>AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical
protein Y50D7A.10 protein.
Length = 138
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -1
Query: 413 CQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE 234
C+ S+ + L+ +CP+ + + +MLY+ S + + V K + D+ E E
Sbjct: 74 CKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNE-CHVSKNTEIRDIDEIDDE 132
Query: 233 AVEEK 219
+E K
Sbjct: 133 LLESK 137
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 425 YTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLY 321
+ H G+ E + +F S PD+ K KKK+LY
Sbjct: 161 FIHSLCGSHEIHPVKIIFRFSKYPDSLKYKKKILY 195
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 347 RCPGTTTSGRASVSC*PPTCPGTGACI 427
RC TT A V C CP ACI
Sbjct: 320 RCSAGTTCQEALVKCAKAPCPSHAACI 346
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 347 RCPGTTTSGRASVSC*PPTCPGTGACI 427
RC TT A V C CP ACI
Sbjct: 385 RCSAGTTCQEALVKCAKAPCPSHAACI 411
>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 26.6 bits (56), Expect = 9.9
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -1
Query: 218 LRATHRQ*TAFTHELATKPN-PLSDTPALTTRGHDTTSRLVLLQRKTNSINMIDFTGGRT 42
+RATH L P+ P SD R H T +R V ++++ I + GG
Sbjct: 1140 IRATHPVQGLVGMLLIAHPDVPRSDVLVRRRRHHHTRTRFVRRIIDESAVDTICYDGGEC 1199
Query: 41 SC 36
SC
Sbjct: 1200 SC 1201
>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 26.6 bits (56), Expect = 9.9
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -1
Query: 218 LRATHRQ*TAFTHELATKPN-PLSDTPALTTRGHDTTSRLVLLQRKTNSINMIDFTGGRT 42
+RATH L P+ P SD R H T +R V ++++ I + GG
Sbjct: 1140 IRATHPVQGLVGMLLIAHPDVPRSDVLVRRRRHHHTRTRFVRRIIDESAVDTICYDGGEC 1199
Query: 41 SC 36
SC
Sbjct: 1200 SC 1201
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 359 CPDTAK-VKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATHRQ 198
C +T ++ K DAL L GV K + + E A++ KL + H++
Sbjct: 954 CQETVTWIEDKTRVLEDSDALTNDLSGVMKLQRRLSMMERDLGAIQAKLDSLHKE 1008
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 359 CPDTAK-VKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATHRQ 198
C +T ++ K DAL L GV K + + E A++ KL + H++
Sbjct: 954 CQETVTWIEDKTRVLEDSDALTNDLSGVMKLQRRLSMMERDLGAIQAKLDSLHKE 1008
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 359 CPDTAK-VKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATHRQ 198
C +T ++ K DAL L GV K + + E A++ KL + H++
Sbjct: 954 CQETVTWIEDKTRVLEDSDALTNDLSGVMKLQRRLSMMERDLGAIQAKLDSLHKE 1008
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 359 CPDTAK-VKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATHRQ 198
C +T ++ K DAL L GV K + + E A++ KL + H++
Sbjct: 954 CQETVTWIEDKTRVLEDSDALTNDLSGVMKLQRRLSMMERDLGAIQAKLDSLHKE 1008
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 359 CPDTAK-VKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATHRQ 198
C +T ++ K DAL L GV K + + E A++ KL + H++
Sbjct: 954 CQETVTWIEDKTRVLEDSDALTNDLSGVMKLQRRLSMMERDLGAIQAKLDSLHKE 1008
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,112,475
Number of Sequences: 27780
Number of extensions: 227849
Number of successful extensions: 830
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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