Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 134 4e-32
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 126 1e-29
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 121 4e-28
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 88 5e-18
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 85 3e-17
09_02_0347 + 7604466-7604622,7604809-7605146 29 2.3
01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313 29 2.3
07_03_0105 + 13455906-13457198 29 3.0
01_07_0346 + 42889121-42890406,42896115-42896118 29 3.0
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 4.0
09_06_0175 + 21350528-21351136 28 4.0
05_06_0149 - 25991761-25993181,25993246-25993324 28 4.0
03_02_0616 - 9874882-9874974,9875067-9875189,9875284-9875379,987... 28 4.0
03_06_0048 - 31274899-31277193 28 5.2
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 5.2
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 27 6.9
10_02_0035 - 4429737-4429781,4430769-4430890,4431000-4431297,443... 27 6.9
06_02_0017 - 10649527-10651183,10651264-10652363 27 6.9
07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520 27 9.1
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 27 9.1
02_05_0274 - 27371048-27371203,27371750-27371779,27372018-273721... 27 9.1
02_03_0147 - 15738479-15738650,15739015-15739256 27 9.1
02_01_0305 + 2041370-2043114,2043764-2044121 27 9.1
01_06_1285 - 35995943-35996087,35996909-35997697,35997802-359978... 27 9.1
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 134 bits (324), Expect = 4e-32
Identities = 61/111 (54%), Positives = 80/111 (72%)
Frame = +2
Query: 179 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDE 358
T G++IWRI+NF+P+P+ GKF+ GDSYIIL+TT+ +L DIHYWIG++++QDE
Sbjct: 49 TGGLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDE 108
Query: 359 SGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSG 511
SG AAILTV LD GG AVQ+RE G+E+ FLSYF+ + GG SG
Sbjct: 109 SGTAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASG 159
Score = 48.4 bits (110), Expect = 3e-06
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Frame = +2
Query: 11 HEVKII--FSCLLFVFLGSVWARTAT---KPQEISGPITSLSDK---NARDKAKVHPAF- 163
H +K+I F ++F W +T ++ G + +L + N + K PA
Sbjct: 334 HVIKVIEGFETVMFKSKFKEWPQTPDLKLSSEDGRGKVAALLKRQGLNVKGLMKAAPAKE 393
Query: 164 ---ANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYII--LRTTSDSRNNLSWDIHY 328
A + T +Q+WRI + + I + D KFY GD YI + D L I
Sbjct: 394 EPQAYIDCTGSLQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL---IGS 450
Query: 329 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPS 508
W G++S +++ A L + + AVQ R G E F FQ+ +GG S
Sbjct: 451 WFGKKSIEEDRVTAISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQS-FQVFKGGLSS 509
Query: 509 G 511
G
Sbjct: 510 G 510
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 126 bits (304), Expect = 1e-29
Identities = 56/110 (50%), Positives = 77/110 (70%)
Frame = +2
Query: 182 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 361
+G+++WRI+NF+P+PV GKFY GDSYIIL+TT+ + D+HYW+G++++QDE+
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 362 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSG 511
G AAILTV LD GG AVQ+RE G E+ LSYF+ + GG SG
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASG 146
Score = 44.8 bits (101), Expect = 4e-05
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +2
Query: 179 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT-TSDSRNNLSWDIHYWIGRESTQD 355
T +Q+WR+ ++ D K Y GD YI T T D + I W G++S ++
Sbjct: 406 TGHLQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEE 463
Query: 356 ESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSG 511
+ +A L + A Q R G E F FQ+ L +GG SG
Sbjct: 464 DRTSAISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQS-LQVFKGGLSSG 514
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 121 bits (291), Expect = 4e-28
Identities = 53/110 (48%), Positives = 78/110 (70%)
Frame = +2
Query: 182 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 361
+G++IWRI+ + +PV ++ G+F+ GDSY+IL+TT+ + DIHYW+G++++QDE+
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 362 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSG 511
G AAI TV LD GG AVQ+RE G+E+ FLSYF+ + EGG SG
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASG 185
Score = 50.8 bits (116), Expect = 6e-07
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 11/178 (6%)
Frame = +2
Query: 11 HEVKII--FSCLLFVFLGSVWARTATK--PQEISGPITSLSDK---NARDKAKVHPAFAN 169
H V+++ F ++F S W + A E G + +L + N + AK P
Sbjct: 383 HIVRLMEGFETVIFRSKFSKWPKKADAVVSDESRGKVAALLKRQGFNVKGLAKAAPVKEE 442
Query: 170 ----VGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIG 337
+ T +Q+WR+ E ++ + KFY GD YI + + I W G
Sbjct: 443 PQPQIDCTGNLQVWRVNGTEKTFLSFSEQCKFYSGDCYIF-QYSYPGEEGEECLIGTWFG 501
Query: 338 RESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSG 511
++S QDE A + + + AV R G E A F S FQ L +GG +G
Sbjct: 502 KKSVQDEKTTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGVSTG 558
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 87.8 bits (208), Expect = 5e-18
Identities = 44/82 (53%), Positives = 53/82 (64%)
Frame = +2
Query: 275 ILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESAL 454
I T S +DIH+WIG++S+QDE+G AAI TV LD GG AVQHRE G+ES
Sbjct: 54 ITTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDK 113
Query: 455 FLSYFQTPLTYLEGGNPSGXTT 520
FLSYF+ + LEGG SG T
Sbjct: 114 FLSYFKPCIIPLEGGFASGFKT 135
Score = 56.4 bits (130), Expect = 1e-08
Identities = 35/135 (25%), Positives = 62/135 (45%)
Frame = +2
Query: 107 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 286
I S +A +V P G+ ++++ + + ++++GKFY GD YI+L T
Sbjct: 376 IKGASKSSAPVDEEVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYT 432
Query: 287 TSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSY 466
+ + YWIG++S ++ A + + G + R G E F++
Sbjct: 433 YHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIAL 492
Query: 467 FQTPLTYLEGGNPSG 511
FQ P+ L+GG SG
Sbjct: 493 FQ-PMVILKGGISSG 506
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/116 (37%), Positives = 62/116 (53%)
Frame = +2
Query: 149 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHY 328
V AF VG G+ IW I I + + GKFY G++YIIL T ++HY
Sbjct: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHNVHY 63
Query: 329 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEG 496
W+G E+ +++ A+ + LD G VQ+RET G ES FLSYF+ + ++G
Sbjct: 64 WVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/104 (25%), Positives = 46/104 (44%)
Frame = +2
Query: 188 VQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGA 367
+++W + N + ++ + Y GD YII + + + W G S ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAWSGLNSINEDRVA 460
Query: 368 AAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGG 499
AA L G+ D G AV + G E +F F++ L +GG
Sbjct: 461 AASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKS-LIIFKGG 503
>09_02_0347 + 7604466-7604622,7604809-7605146
Length = 164
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 163 CQCRQNSRCANMENTELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSG 342
CQ R N + +N + +R + H ++QR F+ +T +Q + + DRSG
Sbjct: 43 CQGRSNMFKGDCKNKNM-FESRVDDLHSHLIQRGFMKGYTCWAKHGEQELGSGAVADRSG 101
Query: 343 VD 348
D
Sbjct: 102 AD 103
>01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313
Length = 289
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 321 STTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTER-PWVTK 446
ST + SRR+ + P SS +AWT A R W+TK
Sbjct: 67 STYLASSSRRRRKRPPVTSSDVAWTVEDAAIGDELRRGTWMTK 109
>07_03_0105 + 13455906-13457198
Length = 430
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 432 VSRCWTAAPPNLSSRPTVRIAAA 364
V R W +A P+L+SRP +AAA
Sbjct: 37 VCRAWRSALPSLASRPLAPVAAA 59
>01_07_0346 + 42889121-42890406,42896115-42896118
Length = 429
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 291 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 413
R+ T G +TTGSV SRR+ + + A T SS P
Sbjct: 125 RSATTKTSGAATTGSVSSRRRARRAAAVARHSAATPSSAPP 165
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 270 TSFYGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 425
TS G PR AT +T GS R+T P QS+P T+ +PR++T
Sbjct: 104 TSVQGAPRAPATA----ATVPQGGSPRRTV--PAQSAPGGPATAQSSPRAAT 149
>09_06_0175 + 21350528-21351136
Length = 202
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +1
Query: 334 RSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCF 453
R G ARRVRS R P R P RR PRD F
Sbjct: 80 RGGGGARRVRSPRTPSRPPNSTSARRR--RPRDAAGTSLF 117
>05_06_0149 - 25991761-25993181,25993246-25993324
Length = 499
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -3
Query: 456 NKALS*PMVSRCWTAAPPNLSSRPTVRIAAAPDSSCVDSRPIQ*WISHDRLLRLSEVVRK 277
N A+S ++R AA P++ T R+ APDS V + PI+ SHD L + V+R+
Sbjct: 71 NDAVSADAMARL-AAANPSI----TFRLLPAPDSPDVGAHPIK--RSHDTLKLANPVLRE 123
Query: 276 MMYESP 259
+ P
Sbjct: 124 FLRSLP 129
>03_02_0616 -
9874882-9874974,9875067-9875189,9875284-9875379,
9875457-9875666,9875718-9875812,9876032-9876123,
9876539-9876660
Length = 276
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 166 QCRQNSRCANMENTELRTNTRCSEG-HRKILQRRFIHHFTDDLGQSQQSIMGYPLLD 333
QC S+C+ +T +R + CSE R+IL+ +H+ +L Q + ++D
Sbjct: 79 QCPLFSKCSLTIDTVIRPDNGCSENTKRQILREHNVHNQAHNLTSEQLAAREVEVVD 135
>03_06_0048 - 31274899-31277193
Length = 764
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 439 THGLSVLDRGAPELVVQANGEDCGGS*LVL-RRLPTDPV 326
T G LDR P VV NG++ G L ++LPT PV
Sbjct: 335 TVGAGTLDRDFPAHVVLGNGKNYSGVSLYSGKQLPTTPV 373
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 249 NSTKEIHTSFYGRPRTVATIYHGIST-TGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 425
NST++ YG G T T + GS S +PP S+ ++ AP+S
Sbjct: 548 NSTQDGSAPSYGAQGVAGQASPGQQTSTPAAGSHPGYSSQPPTSAASSYPVQGSAPQSGY 607
Query: 426 ERP 434
P
Sbjct: 608 GAP 610
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 334 RSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCFVP 459
R A R+ P W GR+ G R PA R G VP
Sbjct: 70 RESAAAGEPRAGEGPGGWEGRRSGGGRAPARRRGGGETRAVP 111
>10_02_0035 -
4429737-4429781,4430769-4430890,4431000-4431297,
4431644-4431682
Length = 167
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +1
Query: 331 DRSGVDARR---VRSRRNPHRWPGRQVRGRR 414
DR G A R V RR+ WPGRQ RGR+
Sbjct: 57 DRQGAAAPRGSGVEQRRSG--WPGRQARGRQ 85
>06_02_0017 - 10649527-10651183,10651264-10652363
Length = 918
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 419 QHRETMGHESALFLSYFQTPLTYLEGGNPSG 511
+H+ HE + L+ F +TY+ G NP G
Sbjct: 196 EHKREELHEVLMLLATFAVTITYVAGLNPPG 226
>07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520
Length = 568
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 10 ARGEDHFFVSPFCFPGIRLGTDGDQASGDKRA 105
ARG DH VS F F ++ G + DKRA
Sbjct: 223 ARGTDHGVVSRFLFYYLKCRVAGAATADDKRA 254
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 315 GISTTGSVGSRRKTSQEPPQSSPLAWTTSSGA 410
G + S G+RR S EP SP++ +SS A
Sbjct: 389 GFAEISSAGNRRSGSSEPNLKSPVSQLSSSKA 420
>02_05_0274 -
27371048-27371203,27371750-27371779,27372018-27372194,
27372598-27372677,27373464-27373505,27373632-27373788,
27374028-27374074,27375205-27375445
Length = 309
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 408 PPNLSSRPTVRIAAAP-DSSCVDSRPIQ*WISHDRLLRL 295
PP PT AAAP ++ RP+Q W H ++ L
Sbjct: 17 PPPAREPPTEPPAAAPAPAAAASDRPLQPWEQHAAVINL 55
>02_03_0147 - 15738479-15738650,15739015-15739256
Length = 137
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 319 YPLLDRSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCFV 456
+PLL R+ A + W G++ RGRR P PR R+C V
Sbjct: 25 FPLLVRTLAQAISSATLARRREWCGQRRRGRRSP-PRTR-RRRCAV 68
>02_01_0305 + 2041370-2043114,2043764-2044121
Length = 700
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 417 TAAPPNLSSRPTVRIAAAPDSSCVDSRP 334
TAA P+ SS T+ AAAP S+ V P
Sbjct: 62 TAAAPSSSSAATLAAAAAPSSAAVAVLP 89
>01_06_1285 -
35995943-35996087,35996909-35997697,35997802-35997871,
35997989-35998220
Length = 411
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 357 SQEPPQSSPLAWTTSSGAPRSSTERPWVTKVLCSYHI 467
SQE SSP W +G R T LC Y +
Sbjct: 154 SQETATSSPPGWENGTGEARQKKGAGINTSELCEYRV 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,771,667
Number of Sequences: 37544
Number of extensions: 429966
Number of successful extensions: 1623
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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