Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E07f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 123 8e-29
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 116 9e-27
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 56 2e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 54 7e-08
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 44 1e-04
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 42 3e-04
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 42 3e-04
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 42 3e-04
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 38 0.005
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 32 0.25
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_659| Best HMM Match : DUF265 (HMM E-Value=5.2) 29 2.3
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 28 4.1
SB_54577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 5.4
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 28 5.4
SB_52890| Best HMM Match : PH (HMM E-Value=1e-06) 27 7.1
SB_44933| Best HMM Match : zf-TRAF (HMM E-Value=2.4e-25) 27 7.1
SB_43044| Best HMM Match : zf-C2H2 (HMM E-Value=0.83) 27 7.1
SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43) 27 7.1
SB_41028| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_38437| Best HMM Match : VWA (HMM E-Value=0) 27 7.1
SB_35827| Best HMM Match : zf-C2H2 (HMM E-Value=0.83) 27 7.1
SB_32246| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3) 27 7.1
SB_12029| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 27 7.1
SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) 27 7.1
SB_56774| Best HMM Match : DNA_pol_viral_N (HMM E-Value=0.41) 27 7.1
SB_55017| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43) 27 7.1
SB_49894| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 27 7.1
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3) 27 7.1
SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3) 27 7.1
SB_30624| Best HMM Match : AT_hook (HMM E-Value=3.3) 27 7.1
SB_29123| Best HMM Match : ATP-synt_F (HMM E-Value=0.26) 27 7.1
SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3) 27 7.1
SB_2346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_50341| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_13297| Best HMM Match : RnaseH (HMM E-Value=0.37) 27 9.4
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 123 bits (297), Expect = 8e-29
Identities = 64/132 (48%), Positives = 84/132 (63%), Gaps = 2/132 (1%)
Frame = +2
Query: 122 DKNA-RDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDS 298
+KN R+ A A+ N G G+QIWRI+ F+ +++D G FY GDSYIIL T +S
Sbjct: 455 EKNVKREAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKES 514
Query: 299 -RNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 475
+ L +D+H+WIG++STQDE G AA TV LD +QHRE G ES LF SYF++
Sbjct: 515 GEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS 574
Query: 476 PLTYLEGGNPSG 511
LT L+GG SG
Sbjct: 575 -LTILKGGVDSG 585
Score = 71.3 bits (167), Expect = 4e-13
Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 227 VAQKDIGKFYKGDSYIILRTTSD-SRNNLSWDIHYWIGRESTQDESGAAAILTVGLD 394
V + D GKFY GDSYIIL T D + L +D+H+WIG++STQDE G AA TV LD
Sbjct: 880 VLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELD 936
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 116 bits (280), Expect = 9e-27
Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Frame = +2
Query: 107 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 286
++ ++ + + A+ A+ N G G+QIWRI F+ ++ G+FY GDSYIIL T
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWT 555
Query: 287 TSDSRNN--LSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFL 460
+ + L +D+H+WIGR STQDE G AA TV LD VQHRE M HES +F
Sbjct: 556 YEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDTYLNDVPVQHREIMNHESDMFK 615
Query: 461 SYFQTPLTYLEGGNPSG 511
+YF++ +TYL+GG +G
Sbjct: 616 TYFKS-ITYLKGGAETG 631
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 173 GRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQ 352
GR+ V +R+ + + G F+ GDSY+++ T R I++W G +S
Sbjct: 155 GRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRV 214
Query: 353 DESGAAAILTVGLD-DKFGGAAVQ 421
E GAAA LTV LD + FGG AVQ
Sbjct: 215 FEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 122 DKNAR-DKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 286
+KN + + A+ PA+ G+ GVQ+WRI F+ ++D G FY GDSYI+L T
Sbjct: 347 EKNVKKESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 149 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL 280
V AF G+ G++IWRI+ + + K G FY GDSYI L
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICL 46
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 251 FYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDK-FGGAAVQHR 427
FY GDSY+IL D N +H G+ ++ DE AA + +DD+ FGG A Q
Sbjct: 677 FYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIAIDDEYFGGKAKQTV 736
Query: 428 ETMGHESALF 457
+ E F
Sbjct: 737 QVCCREKVQF 746
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 317 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 475
++H+W+G E + +E AA V L K G VQ+RE G+E+ F FQ+
Sbjct: 22 NLHFWVGSECSAEEYCTAAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +2
Query: 167 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDSRNNLSWDI 322
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 214 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 273
Query: 323 --------HYWIGRESTQDESGAAAILTVGLDDKFG 406
+W G + T +E GAAA++ V LD++ G
Sbjct: 274 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 309
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +2
Query: 167 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDSRNNLSWDI 322
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 1769 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 1828
Query: 323 --------HYWIGRESTQDESGAAAILTVGLDDKFG 406
+W G + T +E GAAA++ V LD++ G
Sbjct: 1829 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 1864
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 278 LRTTSDSRNNLSWDIHYWIGRESTQDESG 364
L+T D + L W I+YWIG+E++++E G
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEASREEQG 288
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 326 YWIGRESTQDESGAAAILTVGLDDKFG-GAAVQHRETMGHESALFLSYFQTPLTYLEGGN 502
+W G +ST +E GAAA++TV +D + G +H T+ + F Y + + G+
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIYRECSCFFYCDGH 256
Query: 503 PSG 511
G
Sbjct: 257 ALG 259
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 326 YWIGRESTQDESGAAAILTVGLDDKFG 406
+W G +ST +E GAAA++TV +D + G
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEKG 63
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 STKEIHTSFYGRPRTVATIYHGISTTGSVGSR--RKTSQEPPQSSPLAWTTSSGAPRSST 425
+T + ++ +P+T + I H ST S TS +P +SSP+ TTS+ SST
Sbjct: 59 TTTTVGSTILTQPQTSSAICHTTSTQPHTSSAVGHTTSTKPQKSSPIGPTTSTQPQTSST 118
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 285 RPRTVATIYHGISTTGSVGSR--RKTSQEPPQSSPLAWTTSSGAPRSSTERP 434
+P+T +T+ H ST S TS +P SSP+ TTS+ SS P
Sbjct: 112 QPQTSSTVGHTTSTQPQTSSTVGHTTSTKPQTSSPIGHTTSTKPQTSSPIGP 163
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 285 RPRTVATIYHGISTTGSVGSR--RKTSQEPPQSSPLAWTTSSGAPRSS 422
+P+T +T+ H ST S TS +P SSP+ TTS+ SS
Sbjct: 126 QPQTSSTVGHTTSTKPQTSSPIGHTTSTKPQTSSPIGPTTSTQHQTSS 173
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 256 QRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHRW-PGRQVRGRRGPAPRD 432
QRR+IH T G+S+ PL R+ V++R R + + G R RG R
Sbjct: 803 QRRYIHMTTSTTGKSRNRRPYIPLATRTAVESRNQRRYIHMTTFTTGTGPRLPRGGIERQ 862
Query: 433 HGSRK 447
+ RK
Sbjct: 863 YNHRK 867
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.5 bits (63), Expect = 1.8
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Frame = +3
Query: 123 IKTPVTKPKSIRL--LPMSAEQPVCKYGEYRTSNQYPLL--RRT*ENSTKEIHTSFYGRP 290
IK VT P +I LP++ P + TS Q + T +S+K+ T
Sbjct: 632 IKCSVTSPPTITTHSLPVATSLPKQQTSPKVTSPQQTSTSPQETSTSSSKQTSTQQTSSS 691
Query: 291 RTVATIYHGISTTGSVGSRRKTSQEPPQS--SPLAWTTSSGAPRSSTERPWV 440
+ +T +T+ S ++TS PPQ+ SP TTS S +PW+
Sbjct: 692 QQTSTSPPQTTTSPS----QQTSTSPPQTTTSPSQQTTSPPPSSPSIGQPWI 739
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +2
Query: 194 IWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRN--NLSWDIHY--WIGR 340
IWR+Q Q +IG + ++ SD+R +LSW H+ W+ R
Sbjct: 160 IWRLQRARNSDSCQSEIGVNFNSRPQLVTNEKSDTRTCLSLSWLSHFSRWLPR 212
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 135 VTKPKSIRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEI 266
+T K RLL +A +P+ K R++N+Y ++ +N K I
Sbjct: 129 ITSTKEERLLVSTASKPIVKLSYNRSNNKYSYTGQSDDNLLKNI 172
>SB_659| Best HMM Match : DUF265 (HMM E-Value=5.2)
Length = 229
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 279 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAW 392
YG T+ +Y T G GS K + + SPLAW
Sbjct: 106 YGGRYTLDVVYEVTKTLGLRGSSTKKKKRIKKKSPLAW 143
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 60 PSGHGRRPSLRR*AGRSHRCQIKTPVTKPKSIRLLPMSAEQPVCKYGEYRTSNQYPL 230
P+G ++PS +G+ + Q +TP++ KSI +P ++++P + S Q+PL
Sbjct: 1317 PNGQLKQPSSIINSGQLQQLQYRTPISANKSI--IPQTSQEPTSS----QQSCQHPL 1367
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 122 DKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDI-GKFYKGDSYIILRTTSDS 298
+KN KA + F G + G + I +PV +D Y+ ++ II+ TT +
Sbjct: 694 NKNVTGKAGFYEEFE--GESRGTEKQYIAAQGCLPVTVEDFWAMVYQENTRIIVMTTKEV 751
Query: 299 RNNLSWDIHYWIGRESTQD 355
+ YW E+T+D
Sbjct: 752 ERGRNKCTRYWPDAETTKD 770
>SB_54577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 247 KILQRRFIHHFTDDLGQSQQSIMGYPLLDRS 339
+ L RRFI + DLG+S+ +G+ L+ +S
Sbjct: 43 RFLTRRFIGEYDKDLGESKYPSLGFRLVYQS 73
>SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 416
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + +++ +L+RSG+ R+ R
Sbjct: 230 TYARQEKRLNTFHMRCLRRILGIHWSDKVTKNE-------VLERSGLPTLFTLIRQRRLR 282
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 283 WLGHVCRMENGRIPKD 298
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 246 ENSTKEIHTS-FYGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 422
++ST T +G P+T +I IS+ G T PQ++P + T+ + AP +S
Sbjct: 242 QSSTSHSSTPRHHGEPQTTISITSIISSAIPRGHLPTTPSTTPQATPPSTTSQTTAPTAS 301
>SB_52890| Best HMM Match : PH (HMM E-Value=1e-06)
Length = 449
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 72 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 124
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 125 WLGHVCRMENGRIPKD 140
>SB_44933| Best HMM Match : zf-TRAF (HMM E-Value=2.4e-25)
Length = 462
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 116 LSDKNARDKAKVHPAFAN-VGRTAGVQIWRIQNF 214
LSD ++ +K F+N VG G IWR+ NF
Sbjct: 278 LSDLEKKESSKECSLFSNPVGSGYGELIWRVSNF 311
>SB_43044| Best HMM Match : zf-C2H2 (HMM E-Value=0.83)
Length = 226
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 40 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 92
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 93 WLGHVCRMENGRIPKD 108
>SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43)
Length = 677
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 512 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 564
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 565 WLGHVCRMENGRIPKD 580
>SB_41028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 798
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 590 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 642
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 643 WLGHVCRMENGRIPKD 658
>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
Length = 3445
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 107 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKF 253
+ S+S + + + + AF RT IWR +P+AQ+++G+F
Sbjct: 1565 VRSVSSRGVKPRRWNYLAFTYDARTGLGTIWR----NSVPIAQRNLGRF 1609
>SB_35827| Best HMM Match : zf-C2H2 (HMM E-Value=0.83)
Length = 223
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 40 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 92
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 93 WLGHVCRMENGRIPKD 108
>SB_32246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 337 SGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRK 447
SG + R + + + +R R GPAPRD S K
Sbjct: 259 SGEEFRLILQEQERYNTLKDAIRARHGPAPRDENSGK 295
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 27.5 bits (58), Expect = 7.1
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Frame = +3
Query: 138 TKPKSIRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEIHTSF----------YGR 287
T+P+S++ ++QP + + QYP + ++T + TS+ Y +
Sbjct: 1791 TQPQSMQ---GPSQQPSVQQSQQYNGQQYPQAQSYAPSATSQTQTSYNSQSYPVSGAYSQ 1847
Query: 288 PRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTERP 434
P +V +G ST S S + SQ P S+ +TT+ P S ++P
Sbjct: 1848 PSSVGYSTYGQSTAPS--SSQGYSQGGPPSTQATYTTT---PYQSMQQP 1891
>SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 121 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 173
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 174 WLGHVCRMENGRIPKD 189
>SB_12029| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 192
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 6 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 58
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 59 WLGHVCRMENGRIPKD 74
>SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)
Length = 754
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 40 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 92
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 93 WLGHVCRMENGRIPKD 108
>SB_56774| Best HMM Match : DNA_pol_viral_N (HMM E-Value=0.41)
Length = 886
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +3
Query: 249 NSTKEIHTSFYGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 425
++ +++ F PR T + TGS R + + P + AW +SG R T
Sbjct: 395 STARKVDEIFSQDPRRPPTDRSSVDATGSTSRRAEVAFLPNKPHMKAWGNNSGNARPKT 453
>SB_55017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 341 PDRSSSGYPMIDCCDCPRSSVK*CMNLLCR--IFLCPSEQRVL 219
PD+ ++ P C DCP M ++ R IF C E +VL
Sbjct: 57 PDKRTNTLPFTHCYDCPLIITSVYMGIMGRRGIFQCMLEVQVL 99
>SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43)
Length = 458
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 341 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 393
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 394 WLGHVCRMENGRIPKD 409
>SB_49894| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 226
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 40 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 92
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 93 WLGHVCRMENGRIPKD 108
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 2432 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 2484
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 2485 WLGHVCRMENGRIPKD 2500
>SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 290
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 173 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 225
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 226 WLGHVCRMENGRIPKD 241
>SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 156 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 208
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 209 WLGHVCRMENGRIPKD 224
>SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 121 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 173
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 174 WLGHVCRMENGRIPKD 189
>SB_30624| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 406
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 40 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 92
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 93 WLGHVCRMENGRIPKD 108
>SB_29123| Best HMM Match : ATP-synt_F (HMM E-Value=0.26)
Length = 172
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 400 VRGRRGPAPRDHGSRK 447
+R RRGPAPRD S K
Sbjct: 130 IRARRGPAPRDEKSGK 145
>SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 156 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 208
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 209 WLGHVCRMENGRIPKD 224
>SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 348
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 173 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 225
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 226 WLGHVCRMENGRIPKD 241
>SB_2346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 205 TELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHR 384
T R R + H + L+R H++D + ++ +L+RSG+ R+ R
Sbjct: 40 TYARQEKRLNTFHMRCLRRILGIHWSDKVTNNE-------VLERSGLPTLFTLLRQRRLR 92
Query: 385 WPGRQVRGRRGPAPRD 432
W G R G P+D
Sbjct: 93 WLGHVCRMENGRIPKD 108
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 284 TTSDSRNNLSWDIHYWIGRESTQDESGAAAILT 382
++S+S N WD YW E+ + + AA +T
Sbjct: 2031 SSSESLNRSKWDARYWAKFETERKKHQRAASMT 2063
>SB_50341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 284 TTSDSRNNLSWDIHYWIGRESTQDESGAAAILT 382
++S+S N WD YW E+ + + AA +T
Sbjct: 42 SSSESLNRSKWDARYWAKFETERKKHQRAASMT 74
>SB_13297| Best HMM Match : RnaseH (HMM E-Value=0.37)
Length = 393
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -3
Query: 207 CILHICTPAVLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRHEK 28
C H+ TP L ++ +L ++ A S P+I + AV+ P +T R EK
Sbjct: 316 CDAHVATPPPLCQQQQSAPSLVVTPAEWSRRQKEDPVIQKVMHAVKTNKQPMQTTSREEK 375
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,622,384
Number of Sequences: 59808
Number of extensions: 453841
Number of successful extensions: 1628
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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