Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E06f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7QCJ9 Cluster: Mediator of RNA polymerase II transcrip... 146 4e-34
UniRef50_Q9VNG0 Cluster: Mediator of RNA polymerase II transcrip... 113 2e-24
UniRef50_UPI0000584510 Cluster: PREDICTED: similar to Cofactor r... 97 2e-19
UniRef50_Q6P2C8 Cluster: Mediator of RNA polymerase II transcrip... 94 2e-18
UniRef50_A7RWD3 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.004
UniRef50_Q2BDV8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q2AUA2 Cluster: ErfK/YbiS/YcfS/YnhG; n=12; Bacillus|Rep... 33 5.2
UniRef50_A3LVI1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_A1WZ25 Cluster: Outer membrane lipoprotein, Slp family ... 32 9.2
UniRef50_Q54L26 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_A7SG47 Cluster: Predicted protein; n=1; Nematostella ve... 32 9.2
UniRef50_A2EUN3 Cluster: Clan SB, family S8, subtilisin-like ser... 32 9.2
>UniRef50_Q7QCJ9 Cluster: Mediator of RNA polymerase II
transcription subunit 27; n=5; Endopterygota|Rep:
Mediator of RNA polymerase II transcription subunit 27 -
Anopheles gambiae (African malaria mosquito)
Length = 295
Score = 146 bits (353), Expect = 4e-34
Identities = 74/136 (54%), Positives = 97/136 (71%), Gaps = 5/136 (3%)
Frame = +2
Query: 2 IHEYSSFAHTLLSQNSLKRSYINSGSTKRRGKLQSNHNVAPIQVDNVINNIDRSYNDMKI 181
+HEYS+FA TLL QNSLKRSY + TKRR L S+H P V+N+I +I YN+M +
Sbjct: 109 LHEYSTFASTLLQQNSLKRSYYTN--TKRRRSLPSSHLATPQMVENLIGSIH--YNNMNL 164
Query: 182 TISRPFASNAVVQINLSHVLKAVVAFKGLLMEWVMVKGYGETL-----DLWTESRHHVFR 346
I+RPF +NA++ I ++ VL+A V KGLL+EWV VKGY E+L + WTESRH VFR
Sbjct: 165 KIARPFMTNAILHITIARVLRAAVILKGLLIEWVTVKGYEESLLDGVDEQWTESRHQVFR 224
Query: 347 KVTENAHAAMXPFYSP 394
KV ++AH+AM F+SP
Sbjct: 225 KVQDHAHSAMLHFFSP 240
Score = 32.3 bits (70), Expect = 6.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 400 PELAVRXFMTWLHXYVNLF 456
PELA+R F+TW YV LF
Sbjct: 243 PELAIRSFITWFRSYVTLF 261
>UniRef50_Q9VNG0 Cluster: Mediator of RNA polymerase II
transcription subunit 27; n=1; Drosophila
melanogaster|Rep: Mediator of RNA polymerase II
transcription subunit 27 - Drosophila melanogaster
(Fruit fly)
Length = 293
Score = 113 bits (273), Expect = 2e-24
Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Frame = +2
Query: 2 IHEYSSFAHTLLSQNSLKRSYINSGSTKRRGKLQSNHNVAPIQVDNVINNIDRSYNDMKI 181
+H++S A L+QN+L+RSY N S KR+ S+ N P +D +++ I+ +
Sbjct: 106 VHDHSFLAFNNLNQNTLRRSY-NYCSQKRQRLPFSSFNNDPDHIDKLLSEINTPPHT-SY 163
Query: 182 TISRPFASNAVVQINLSHVLKAVVAFKGLLMEWVMVKGYGETL---DLWTESRHHVFRKV 352
I RPF +NAV + +S+V+KA + FKG+L+EWV VKG+ E L DLW ESR+ VFRKV
Sbjct: 164 RIFRPFGTNAVTIVTISNVMKAAIVFKGVLIEWVTVKGFDEPLEHDDLWAESRYEVFRKV 223
Query: 353 TENAHAAMXPFYSP 394
++AH+AM F+SP
Sbjct: 224 QDHAHSAMLHFFSP 237
>UniRef50_UPI0000584510 Cluster: PREDICTED: similar to Cofactor
required for Sp1 transcriptional activation, subunit 8;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Cofactor required for Sp1 transcriptional
activation, subunit 8 - Strongylocentrotus purpuratus
Length = 244
Score = 97.1 bits (231), Expect = 2e-19
Identities = 52/142 (36%), Positives = 90/142 (63%), Gaps = 8/142 (5%)
Frame = +2
Query: 2 IHEYSSFAHTLLSQNSLKRSYINSGS-TKRRGKLQSNHNVAPIQVDNVINNIDRSYNDMK 178
+ E+S+ + L+ +S+KRS + GS KRR +N N++ VDN++ N++R ++D+K
Sbjct: 53 LREHSAHSQAFLNNSSIKRSSGSGGSPAKRRKTAPTNLNISTQAVDNLVMNVNRQFHDVK 112
Query: 179 ITISRPFASNAVVQINLSHVLKAVVAFKGLLMEWVMVKGYGE-------TLDLWTESRHH 337
IT + + V+Q+ +S L+A++ +GLL+E V+++ + E TLDLWT S++
Sbjct: 113 ITKIQ--LNPTVLQVYVSRTLQAIIVLRGLLIERVLIRAHHENTLNDDGTLDLWTASKYE 170
Query: 338 VFRKVTENAHAAMXPFYSPXYQ 403
VF+K+TE+A AA +Y P Q
Sbjct: 171 VFQKITEHATAASLRYYLPTMQ 192
>UniRef50_Q6P2C8 Cluster: Mediator of RNA polymerase II
transcription subunit 27; n=34; Euteleostomi|Rep:
Mediator of RNA polymerase II transcription subunit 27 -
Homo sapiens (Human)
Length = 311
Score = 93.9 bits (223), Expect = 2e-18
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 9/137 (6%)
Frame = +2
Query: 11 YSSFAHTLLSQNSLKRSYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKIT 184
++ A LL+Q SLKRS G S KRR K Q V P Q VD+VI+ IDR + +M I
Sbjct: 120 HAGLASGLLNQQSLKRSANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIH 179
Query: 185 ISRPFASNAVVQINLSHVLKAVVAFKGLLMEWVMVKGYGET-------LDLWTESRHHVF 343
+SRP ++A++ + L VLK +V + L ++ +VKGY E LD+W++S + VF
Sbjct: 180 LSRPNGTSAMLLVTLGKVLKVIVVMRSLFIDRTIVKGYNENVYTEDGKLDIWSKSNYQVF 239
Query: 344 RKVTENAHAAMXPFYSP 394
+KVT++A A+ + P
Sbjct: 240 QKVTDHATTALLHYQLP 256
Score = 31.9 bits (69), Expect = 9.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 400 PELAVRXFMTWLHXYVNLFR 459
P++ VR FMTWL Y+ LF+
Sbjct: 259 PDVVVRSFMTWLRSYIKLFQ 278
>UniRef50_A7RWD3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 307
Score = 43.2 bits (97), Expect = 0.004
Identities = 23/96 (23%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Frame = +2
Query: 122 PIQVDNVINNIDRSYNDMKITISRPFASNAVVQINLSHVLKAVVAFKGLLMEWVMVKGYG 301
P N++ + + +++++ R S A+ ++ + KA++ KG+ ++ V ++G
Sbjct: 150 PPLTPNILEALKAKHINLRVSGYRICGSTAL-EVTVPKTFKAIIMLKGVGIDQVKIRGLY 208
Query: 302 ETL------DLWTESRHHVFRKVTENAHAAMXPFYS 391
E D+W+ S+H VF+K+T+ A++A +Y+
Sbjct: 209 ECSLMEKKDDIWSPSKHIVFQKLTDYANSAALHYYN 244
>UniRef50_Q2BDV8 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
protein - Bacillus sp. NRRL B-14911
Length = 107
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 2 IHEYSSFAHTLLSQNSLKRSYINSGSTKRRGKLQSNHNVAPIQVDNVINN 151
++ Y S+AH + +NSL R Y + +TK + ++A I + ++INN
Sbjct: 59 VYFYDSYAHQVYDRNSLARLY-DYWATKNVRSFAAARDMASIDIRSIINN 107
>UniRef50_Q2AUA2 Cluster: ErfK/YbiS/YcfS/YnhG; n=12; Bacillus|Rep:
ErfK/YbiS/YcfS/YnhG - Bacillus weihenstephanensis KBAB4
Length = 481
Score = 32.7 bits (71), Expect = 5.2
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 110 HNVAPIQVDNVINNIDRSYNDMKITISRPFASNAVVQI-NLSHVLKAVVAFKGLLMEWVM 286
+ V P++ ++I N S DMK+TI N + +I N L +FK +
Sbjct: 240 NEVYPLKAKDLIQNASMS-KDMKVTIDASDIKNKIAEINNAKSTLNKNFSFKTHSGSVIS 298
Query: 287 VK--GYGETLDLWTESR 331
VK GYG LD+ E++
Sbjct: 299 VKGQGYGWALDVEKETK 315
>UniRef50_A3LVI1 Cluster: Putative uncharacterized protein; n=1;
Pichia stipitis|Rep: Putative uncharacterized protein -
Pichia stipitis (Yeast)
Length = 730
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 56 RSYINSGSTKRRGKLQSNHNVAPIQVDNVINNIDRSYNDMKITISRPFASNAV 214
R Y S S K +G SN++++P+ +D IN +D S D I ASN +
Sbjct: 172 RGYSYSNSLKTKGLDLSNYDLSPLDID--INRLDASRLDESIFALSSAASNVI 222
>UniRef50_A1WZ25 Cluster: Outer membrane lipoprotein, Slp family
precursor; n=2; Ectothiorhodospiraceae|Rep: Outer
membrane lipoprotein, Slp family precursor -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 189
Score = 31.9 bits (69), Expect = 9.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 296 YGETLDLWTESRHHVFRKVTENAHAAMXPFYSPXYQSW 409
YG T + + HH++++ E A P+Y P Y W
Sbjct: 129 YGYTYPVVEVAAHHLWQERAEPRQVAPRPYYDPWYDPW 166
>UniRef50_Q54L26 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 804
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = +2
Query: 131 VDNVINNIDRSYNDMKITISRPFASNAVVQINLSHVLKAVVAFKGLLMEWVMVKGYGETL 310
++++I +ID+S K+TIS P S + ++ + + ++++ A G+L+E +++ L
Sbjct: 332 IESLIQSIDKSTKTFKLTISHPLVSRSTIKNSETITMESIKA--GMLVETKVLRVLSNGL 389
Query: 311 DL 316
L
Sbjct: 390 HL 391
>UniRef50_A7SG47 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 493
Score = 31.9 bits (69), Expect = 9.2
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Frame = +2
Query: 38 SQNSLKRSYINSGSTKRRGKLQSNHNVAPIQVDNVINNIDRSYN---DMKITISRPFA-- 202
SQ S+ +++ SG++ + + + +P V V N+DR+ ++ + RP
Sbjct: 197 SQASISTAHVKSGTSALKWEWPGSGATSPSMVLKVARNVDRNTRRKGGIRFWMYRPHTQV 256
Query: 203 ---SNAVVQIN------LSHVLKAVVAFKGLLMEWVMVKGYG 301
+NA V+I LS ++K + F+G WV K G
Sbjct: 257 ANVANATVEITFNTDAGLSKIIKVNLGFEGWRTAWVTYKELG 298
>UniRef50_A2EUN3 Cluster: Clan SB, family S8, subtilisin-like serine
peptidase; n=1; Trichomonas vaginalis G3|Rep: Clan SB,
family S8, subtilisin-like serine peptidase -
Trichomonas vaginalis G3
Length = 773
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +2
Query: 95 KLQSNHNVAPIQVDNVINNIDRSYNDMKITISRPFASNAVV-QINL-----SHVLKAVVA 256
K+Q N+ V+ V N D Y D++I + P ++A+V Q+++ +++K +
Sbjct: 401 KIQMKDNLFIETVELVFNIADEDYGDIRIEVISPSKTHAIVKQLSIMRNVPKNMIKRTIT 460
Query: 257 FKGLLMEW 280
+ L EW
Sbjct: 461 IRNFLGEW 468
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,668,561
Number of Sequences: 1657284
Number of extensions: 7588619
Number of successful extensions: 17136
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17122
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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