Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 272 MEWVMVKGYG 301
           M+W+  KGYG
Sbjct: 355 MDWIKSKGYG 364


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +1

Query: 424  MTWLHXYVNLFRXXXNXAVXIYIXHLC 504
            + WLH     F      A   YI H+C
Sbjct: 990  IVWLHLVYISFLGIICAADVFYICHVC 1016


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +1

Query: 424 MTWLHXYVNLFRXXXNXAVXIYIXHLC 504
           + WLH     F      A   YI H+C
Sbjct: 271 IVWLHLVYISFLGIICAADVFYICHVC 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,075
Number of Sequences: 336
Number of extensions: 1993
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)