Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E05f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0BW43 Cluster: Hypothetical secreted protein; n=1; Gra...    33   4.0  
UniRef50_Q0UVS4 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q7R5G1 Cluster: GLP_165_33112_31493; n=1; Giardia lambl...    33   5.2  
UniRef50_Q014F3 Cluster: Ubiquitin activating enzyme; n=1; Ostre...    32   6.9  

>UniRef50_Q0BW43 Cluster: Hypothetical secreted protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           secreted protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 540

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -3

Query: 516 FRPVASSSTIPL*LQMVSGINFIGAITSERRFCVLVRSKMPVSLLN 379
           FRPV+ + TIP+ + + S +  I  IT  ++   L R K P S +N
Sbjct: 243 FRPVSGNGTIPISVGITSRVYGINTITRCQKDAFLQREKYPPSCIN 288


>UniRef50_Q0UVS4 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 637

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -1

Query: 281 APCYCVSGRYETCRCLRVRYDWLPRMRSADIFTSFPYNVKWWLF 150
           APCY  SG Y+  +C     D   R  + D+ TS P ++ W LF
Sbjct: 126 APCYQSSGMYDALKCA----DISARFTTPDLHTSDPTSMMWPLF 165


>UniRef50_Q7R5G1 Cluster: GLP_165_33112_31493; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_165_33112_31493 - Giardia lamblia
           ATCC 50803
          Length = 539

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
 Frame = -1

Query: 509 LSPHRRRYLYDCR-WFPELILSVP*QASDGSVYSCVRRCLFHC*TFCANCIIFSGNAEVF 333
           L P RR  L+ C   +    ++        + YSC R     C +      I+  ++ V 
Sbjct: 188 LQPARRICLHSCPIGYAANPITNTCDLCPANCYSCERAIEDQCTSCVDGYFIYRTDSNVL 247

Query: 332 VKGQCIPNLSRSA*RATAPCYCVSGRYETC-RC 237
             G+C+P  + +A      C+ + G    C RC
Sbjct: 248 TMGRCVPECAEAAVGPCVECHAILGSARYCSRC 280


>UniRef50_Q014F3 Cluster: Ubiquitin activating enzyme; n=1;
           Ostreococcus tauri|Rep: Ubiquitin activating enzyme -
           Ostreococcus tauri
          Length = 879

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 141 RKDKQPPFHIIWEGREDIGASHSRQPIVAHP*TSTSFVATADAVTGRRSSL 293
           + ++ P  H+ +   +   A H  +PI      +  FVA A+A+ GRR ++
Sbjct: 284 KMERSPQLHLAFGALDAYVAKHGAEPIPGSEADAEKFVAEAEALNGRRKAV 334


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,166,708
Number of Sequences: 1657284
Number of extensions: 10364314
Number of successful extensions: 24436
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24423
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)