Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E05f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113265-1|AAM29270.1|  414|Drosophila melanogaster AT15673p pro...    29   5.1  
AE014298-2330|AAF48564.2|  621|Drosophila melanogaster CG8958-PA...    29   5.1  

>AY113265-1|AAM29270.1|  414|Drosophila melanogaster AT15673p
           protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 341 PHSQKK*YSSRKTFNSETGIFERTSTQNRRSLVMAPIKLIPETICSH 481
           PHS     S +K  +S + IF  +S  N +SLV    K I E + +H
Sbjct: 250 PHSAGSSPSEKKVSSSSSEIFTASSVINEKSLVDESPKPIKEPVETH 296


>AE014298-2330|AAF48564.2|  621|Drosophila melanogaster CG8958-PA
           protein.
          Length = 621

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 341 PHSQKK*YSSRKTFNSETGIFERTSTQNRRSLVMAPIKLIPETICSH 481
           PHS     S +K  +S + IF  +S  N +SLV    K I E + +H
Sbjct: 457 PHSAGSSPSEKKVSSSSSEIFTASSVINEKSLVDESPKPIKEPVETH 503


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,549,762
Number of Sequences: 53049
Number of extensions: 494497
Number of successful extensions: 1043
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)