Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79759-3|CAB02136.1|  225|Caenorhabditis elegans Hypothetical pr...    30   0.87 
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z83105-5|CAB05481.1|  196|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81119-9|CAB03339.1|  502|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z75542-1|CAA99859.1|  141|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U80439-9|AAO38675.1|  661|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z79759-3|CAB02136.1|  225|Caenorhabditis elegans Hypothetical
           protein ZK858.3 protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -2

Query: 469 GFRN*FYRCHNKRATVLCTRAFEDACFTVERFARTVLFFLGMRRFS 332
           GF     +CH+K+AT+    + E+     +   ++VL ++G+ RFS
Sbjct: 98  GFAKAERKCHDKQATLFVANSMEEWDAVRDHAEKSVLSWIGLVRFS 143


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 410 CVRRCLFHC*TFCANCIIFSGNAEVFVKGQCIP 312
           CV  C+  C   C N +  +  A V V  QCIP
Sbjct: 372 CVPSCMPACQPSCTNPVPLTTQAPVPVVNQCIP 404


>Z83105-5|CAB05481.1|  196|Caenorhabditis elegans Hypothetical
           protein F14H3.5 protein.
          Length = 196

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +3

Query: 264 DAVTGRRSSLR*TGQIRNTLTFNENLRIPRKNN--TVRAKRSTVKQASSNARVHRTVARL 437
           DA     S  R T  ++      + L++ RK +  T+R   + ++Q     RVH    +L
Sbjct: 20  DAENTFNSIQRCTTTLKGFQKSYDELKLQRKQSLQTIRQHEADIQQLEQGIRVHTAAFQL 79

Query: 438 LWHR*N*FRKPSAVIK 485
           L    +  R+P+ +++
Sbjct: 80  LRRLLSEIRRPNQILQ 95


>Z81119-9|CAB03339.1|  502|Caenorhabditis elegans Hypothetical
           protein T10H4.11 protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 414 LVRSKMPVSLLNVLRELYYFFWECGG 337
           L R   P+ L+  L +L+Y+ W+ GG
Sbjct: 25  LPRGPYPLPLIGNLHQLFYYCWKNGG 50


>Z75542-1|CAA99859.1|  141|Caenorhabditis elegans Hypothetical
           protein F55D12.1 protein.
          Length = 141

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 138 QRKDKQPPFHIIWEGREDIGASHSRQPI 221
           +RK   PP ++I E RE +   + R+P+
Sbjct: 12  ERKSPHPPQNVISERREFVSCEYRREPL 39


>U80439-9|AAO38675.1|  661|Caenorhabditis elegans Hypothetical
           protein C01G8.9b protein.
          Length = 661

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 334 SLKVNVFRICPVQRSELR--RPVTASAVATKLVDVYGCATIGCRECEAPISS 185
           S   N     P Q+S     +PV  SA AT  V+V+G  T+ C     P+SS
Sbjct: 512 STSTNSDAAAPPQKSTSSSPKPVEESA-ATTSVNVHGNGTLECETSSRPLSS 562


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
            C01G8.9a protein.
          Length = 1724

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 334  SLKVNVFRICPVQRSELR--RPVTASAVATKLVDVYGCATIGCRECEAPISS 185
            S   N     P Q+S     +PV  SA AT  V+V+G  T+ C     P+SS
Sbjct: 1575 STSTNSDAAAPPQKSTSSSPKPVEESA-ATTSVNVHGNGTLECETSSRPLSS 1625


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,161,134
Number of Sequences: 27780
Number of extensions: 256868
Number of successful extensions: 649
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)