Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    28   0.067
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.1  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   1.9  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               23   2.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.8  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    21   7.7  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 0.067
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 327 FNENLRIPRKNNTVRAKRSTVKQASSNARVHRTVARLLWH 446
           +NEN  + R+N  V AK     QA +  +V R ++ +L H
Sbjct: 328 WNENRLLDRRNIEVVAKNKETLQAITGLKVKRRISFILVH 367


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +3

Query: 327 FNENLRIPRKNNTVRAKRSTVKQASSNARVHRTVARLLWHR*N 455
           +NEN  + R+N  + AK +   Q  S  ++ + ++  ++ R N
Sbjct: 327 WNENRPLKRRNIEIVAKNNDTLQFISGIKIIKQISSNIYERQN 369


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 464 PELILSVP*QASDGSVYSCVRRCLFHC 384
           PE + S+P +      Y    +C +HC
Sbjct: 583 PESVCSLPCEVGQAKKYVAGEQCCWHC 609


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 152 FVFSLLDTVYILCGSP 105
           F+ +++ T  ILCGSP
Sbjct: 437 FLTTIVSTTVILCGSP 452


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 403 EDACFTVERFARTVLFFL 350
           ED C T ++F+R V+ ++
Sbjct: 108 EDKCLTAQKFSRCVIDYV 125


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 41  VVLENDFSTELFL 3
           VV+ ND STE FL
Sbjct: 447 VVISNDKSTEFFL 459


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 107 AIHIKYRPYPTKKRQTATISHYMGRT*RYRR 199
           AI   YRP   KKR    I H   R  + +R
Sbjct: 2   AIRPVYRPTIVKKRTKKFIRHQSDRYSKLKR 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,235
Number of Sequences: 438
Number of extensions: 3279
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)