Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 31 0.44
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 31 0.44
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 30 1.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 30 1.3
SB_57258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 29 1.8
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 29 1.8
SB_48315| Best HMM Match : GASA (HMM E-Value=1.8) 29 1.8
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 1.8
SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_27499| Best HMM Match : RVT_1 (HMM E-Value=9.2e-39) 29 1.8
SB_25381| Best HMM Match : ETF (HMM E-Value=9.9) 29 1.8
SB_15323| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 29 1.8
SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) 29 2.3
SB_51971| Best HMM Match : rve (HMM E-Value=7.7e-31) 29 2.3
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 2.3
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 28 4.1
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 4.1
SB_56795| Best HMM Match : rve (HMM E-Value=2.7e-16) 28 5.4
SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_50230| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 28 5.4
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17) 28 5.4
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0) 27 7.1
SB_56508| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 27 7.1
SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014) 27 7.1
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 27 7.1
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 27 7.1
SB_59748| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_52040| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_41991| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_5506| Best HMM Match : rve (HMM E-Value=0.00062) 27 9.4
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 27 9.4
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_41425| Best HMM Match : DCX (HMM E-Value=8.6e-06) 27 9.4
SB_39174| Best HMM Match : SPDY (HMM E-Value=8.9) 27 9.4
SB_22650| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 27 9.4
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 251 PWPDAGPYPQPHVAIAVDPSTPPETPPA 334
P P + P+ P+ V STPP+TPP+
Sbjct: 149 PAPTSSPHAYPYSPAQVQLSTPPQTPPS 176
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PPA + +P R
Sbjct: 1227 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPPA-VASTPVR 1283
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +2
Query: 257 PDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRAALVDDVLW 385
PD P QP V D PP PP T + C+ D W
Sbjct: 701 PDTQPPTQPPVTQPPDTPVPPTQPPVTDAPAHCKDIYSDCPEW 743
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 257 PDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCR 358
PD P QP V D PP PP T + C+
Sbjct: 776 PDTQPPTQPPVTQPPDTPVPPTQPPVTDAPANCK 809
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 221 TPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPP 331
+PPA A A P P A P P A P+ PP PP
Sbjct: 56 SPPAAAPAAPPPPAAAPAAPP--PPAAPPAAPPPPPP 90
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 239 RALRPWPDAGPYPQPHVAIAVDP-STPPETPPAT 337
R RP G YPQPH ++ P S PP PP +
Sbjct: 432 RLTRPPLRLGSYPQPHPSMMFAPGSLPPYFPPGS 465
>SB_57258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 122 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 178
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 1188 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 1244
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 1210 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 1266
>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1284
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 1213 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 1269
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 587 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 643
>SB_48315| Best HMM Match : GASA (HMM E-Value=1.8)
Length = 340
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 122 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 178
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDP---STPPETPPATIGRSP 352
PP+ + P P G P P + +A P + PP PP +G P
Sbjct: 330 PPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPP 375
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPE---TPPATIGRSP 352
PP+ A P A P P P + P PP PP+++G P
Sbjct: 348 PPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPP 393
>SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 880 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 936
>SB_27499| Best HMM Match : RVT_1 (HMM E-Value=9.2e-39)
Length = 872
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 587 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 643
>SB_25381| Best HMM Match : ETF (HMM E-Value=9.9)
Length = 528
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 350 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 406
>SB_15323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 36 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 92
>SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05)
Length = 717
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPPATIGRSPCR 358
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP + +P R
Sbjct: 646 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPP-DVASTPVR 702
>SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39)
Length = 1311
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPSTPPETPP 331
+ G + L TP ++ + P P+ P P+ P + V P+ E+PP
Sbjct: 1104 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVAPTCTTESPP 1152
>SB_51971| Best HMM Match : rve (HMM E-Value=7.7e-31)
Length = 488
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = +2
Query: 191 LRGGAYELIQTPPACARALRPWPDAGPYPQ--PHVAIAVDPS----TPPETPPATIGRSP 352
+ G + L TP ++ + P P+ P P+ P + V P+ +PP+ P + R P
Sbjct: 417 MTGSGFVLPSTPVVSSKPILPEPEVTPLPEVSPKSSETVVPTCTTESPPDVPSTPVKRYP 476
Query: 353 CR 358
R
Sbjct: 477 RR 478
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 221 TPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRAAL 367
+P C P P + P P P P+ PP +PPA +PC A+
Sbjct: 514 SPSCCGSYPAPQPPSPPAPPPK------PAPPPRSPPAA---APCNPAM 553
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 227 PACARALRPWPDAGPYPQPHVAIAVDP-STPPETPPAT-IGRSPC 355
P A AL P P GP P P + P +T PPAT + +PC
Sbjct: 11 PPLATALCPTPCYGPVPHPLLRPCAPPLATALSPPPATALCPTPC 55
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 251 PWPDAGPYPQPHVAIAVDPSTPPETPPAT 337
P P P P P PSTPP PP+T
Sbjct: 685 PPPPPPPPPPPPPPPPPQPSTPPPPPPST 713
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.3 bits (60), Expect = 4.1
Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Frame = +2
Query: 14 TRHGPMVEHAVVDCSQASAMQTL--PLQPHREADDDQLADEYVQNFELDHLEDHNLVKRE 187
+RHGP ++ + M + P P Q++ D V++E
Sbjct: 695 SRHGPPPTGLTMNPPTSMGMAPMMPPPGPGMGTHPQQVSPGQTSILADDGFSGVGFVEQE 754
Query: 188 PLRGGAYELIQ-----TPPACARALRPWPDAGPYP-QPHVAIAVDPSTP----PETPPAT 337
+ G Y+ + TPP + + W G YP QP + P+ P P PP+
Sbjct: 755 TVPGKMYDPSESPAGMTPPPTSTSPSGWQGRGRYPSQPSPTDVLPPTLPQAPYPGGPPSM 814
Query: 338 IGRSP 352
G P
Sbjct: 815 SGMPP 819
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 269 PYPQPHVAIAVDPSTPPETPPATIGRSP 352
P PQP A P P TPP T R P
Sbjct: 282 PSPQPTEAKPHTPPPPTSTPPTTAPRQP 309
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +2
Query: 188 PLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
PL G + PP P P PQP A P PP PP G P
Sbjct: 703 PLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGL--PPPPPPPPPGCAGLPP 755
>SB_56795| Best HMM Match : rve (HMM E-Value=2.7e-16)
Length = 320
Score = 27.9 bits (59), Expect = 5.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 15 RGTAPWWSTRSWIALRRAL 71
RGT PWW+++++ L+R +
Sbjct: 274 RGTDPWWTSKAYPILKRVM 292
>SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 72 CKPFHCSRIAKLMTISSLMNTYRTLSWTISKIT 170
C +H SR+A+L+++ N +T+SW SK++
Sbjct: 913 CLRYH-SRLAELVSLKKEENYSKTISWIRSKVS 944
>SB_50230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 227 PACARALRPWPDAGPYPQPHVAIAVDPSTPP-ETP-PATIG-RSPCRAALVD 373
P +RA P P P P+P + + D PP ETP P G R P R A D
Sbjct: 43 PGASRAAPPPPVPEPEPEPDLDL--DLPVPPHETPRPKKTGKRQPMRKAKAD 92
>SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 441
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 257 PDAGPYPQPHVAIAVDPSTPPETPPATI 340
P P PQP A A+ PS P +PPA +
Sbjct: 176 PPTAPPPQP--APAISPSAPAISPPAPV 201
>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
Length = 409
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
Frame = +2
Query: 89 QPHREADDDQLADEYVQNFELDHLEDHNLVKREPLRGGAYELIQ--TPPACARA------ 244
+P + A D+ + V++ E ++ K EP++G Y+L+Q PP +
Sbjct: 231 KPPQVALSDECYEAPVESEEAPPIQPPRPPKSEPIQGETYDLVQEAAPPVALASQSEAAL 290
Query: 245 -------LRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRAALVDD 376
++ P P P TPP TPPA + ++P + LV++
Sbjct: 291 GDEFYDTAEEETESKPSPPPPGEKKAPLPTPPSTPPA-VTKAPV-STLVEE 339
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPET-PPA--TIGRSPCRAALVDDVLWLPH 394
PP P P GP P P P PP PP+ GR P A +++ PH
Sbjct: 379 PPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPSEGKCGRKPAGARIINGQNAQPH 438
>SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)
Length = 808
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 291 LSLLIPVHLLKPLRRRLAVVHVVPP*LTMYS 383
+S ++PVHL PL++R A + PP T +S
Sbjct: 466 VSHVVPVHLATPLQQRPAPLCAPPPEATPHS 496
>SB_56508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 15 RGTAPWWSTRSWIALRRALCKPFH 86
R T PWW+++S+ L+R + +P H
Sbjct: 267 RATDPWWTSKSYPILKRVM-EPGH 289
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 257 PDAGPYPQPHVAIAVDPSTPPETPPATIG 343
PDA P P A +PP+TPP G
Sbjct: 221 PDAPTPPPPVKTTAAPTPSPPQTPPPPTG 249
>SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014)
Length = 399
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 257 PDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRA 361
P A P P P D STPP TP PC A
Sbjct: 288 PRAKPPPLPRNPPPKDESTPPRTPRRVRTLYPCVA 322
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +2
Query: 119 LADEYVQNFELDHLEDHNLVK-REPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAI 295
+A Q +L + +H++ + + + GG + PPA A P P P P
Sbjct: 259 IAPSVPQGLDLPDVLEHDIPEVPDIVTGGGAPVPPPPPADGSAPAP-----PPPPPPGGA 313
Query: 296 AVDPSTPPETPPATIGRSP 352
P PP PP G P
Sbjct: 314 PPPPPPPPPPPPGDGGAPP 332
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 224 PPACARALR-PWPDAGPYPQPHVAIAVDPSTPPETP 328
PP+ A R P P+ GP PQPH P PP P
Sbjct: 387 PPSGFHAQRGPQPEMGPTPQPH------PYVPPMGP 416
>SB_59748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 15 RGTAPWWSTRSWIALRRAL 71
R T PWW+++++ L+RA+
Sbjct: 249 RATDPWWTSKAYPILKRAM 267
>SB_52040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 15 RGTAPWWSTRSWIALRRA 68
R T PWW++++++ LR A
Sbjct: 234 RATDPWWTSKAYLILRTA 251
>SB_41991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 257 PDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCR 358
P +P + VDP T PE P RSP R
Sbjct: 483 PATYQHPMAPYDVLVDPQTLPEMPAKMATRSPTR 516
>SB_5506| Best HMM Match : rve (HMM E-Value=0.00062)
Length = 390
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 15 RGTAPWWSTRSWIALRRA 68
R T PWW+++++ L+RA
Sbjct: 244 RATDPWWTSKAYTILKRA 261
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 50 DCSQASAMQTLPLQPHREADDDQLADEYVQNFELDHLEDHNL-VKREPLRGGAYELIQTP 226
+ S S Q+ P+ P + DDQL++ + EL H + + +K + G E TP
Sbjct: 15 ETSSKSLTQSSPVVPSIKGSDDQLSESRNSSVELSHHKPFSTELKHDQGYEGDSETCHTP 74
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 15 RGTAPWWSTRSWIALRRA 68
R T PWW++++++ LR A
Sbjct: 2516 RATDPWWTSKAYLILRTA 2533
>SB_41425| Best HMM Match : DCX (HMM E-Value=8.6e-06)
Length = 1098
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 160 RRSQPGET*AASWRSVRIDTNAAGMCSCSPTLA*CGTVSTTAC 288
+ S PG S R V + T +A + SC L G+ + +C
Sbjct: 948 KSSAPGSATLMSCRDVLVSTGSATLMSCLDVLVSTGSATLMSC 990
>SB_39174| Best HMM Match : SPDY (HMM E-Value=8.9)
Length = 205
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 39 TRSWIALRRALCKPFHCSRIAKLMTISSLMNTYRTLSWTISKITTW 176
T WIA L KPF K+ ++L + L + T W
Sbjct: 15 TTIWIAQSVVLSKPFEAQSDEKVFRFANLYGNHMVLQQAPHRATVW 60
>SB_22650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 266 GPYPQPHVAIAVDPSTPPET--PPATIGRS 349
GPYP+ H++ AVD +T IGRS
Sbjct: 120 GPYPESHISSAVDSEDDSDTDDDDLEIGRS 149
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 200 GAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPAT 337
G Y PP A +P+P G PQP P PP+ P T
Sbjct: 151 GGYPPTSYPPQPYPA-QPYPQQGYPPQPPPQAYPQPGYPPQGYPPT 195
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,400,462
Number of Sequences: 59808
Number of extensions: 379004
Number of successful extensions: 1917
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1892
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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