Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067936-6|AAC19214.1| 348|Caenorhabditis elegans Ground-like (... 35 0.041
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 34 0.054
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 31 0.50
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 31 0.50
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 0.66
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 31 0.66
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 30 0.87
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 0.87
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 0.87
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 29 1.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 1.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 1.5
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 29 1.5
Z70753-2|CAA94760.1| 275|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical ... 29 2.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 3.5
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 3.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 28 4.7
Z37140-6|CAA85501.1| 190|Caenorhabditis elegans Hypothetical pr... 27 6.2
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 27 6.2
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 27 6.2
AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical ... 27 6.2
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 27 6.2
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 27 6.2
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 27 8.1
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF067936-6|AAC19214.1| 348|Caenorhabditis elegans Ground-like (grd
related) protein 1 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = +2
Query: 131 YVQNFELDHLEDHNLVKREPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPS 310
Y++ F + + + + P R Y +Q P AC + P P PQ I PS
Sbjct: 149 YIREFPSGYSPEAFITRPLPYRPVPYMPVQLPAACQQYFLPPQRPQPMPQVTPQIIQLPS 208
Query: 311 TPPETPPATIGRSP 352
PP TI + P
Sbjct: 209 AYVTAPPVTIRQQP 222
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 34.3 bits (75), Expect = 0.054
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2
Query: 83 PLQPHREADDDQLADEYVQNFELDHLEDHNLVKREPLRGGAYELIQTPPACARALRPWPD 262
P P AD+ + +E + + ++ + N VK E R A +A+R D
Sbjct: 99 PKVPEPTADEIEAKEEEYKKNKSEYYKRRNEVKTEEARERRRVRDSETDAWKKAIR---D 155
Query: 263 AGPYPQPHVAIAVDP---STPPETPPATIGRSP 352
AG P P A P STP TPP + SP
Sbjct: 156 AGQSPDPKRAPRYSPPPSSTPTPTPPPSSSSSP 188
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 227 PACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATI-GRSPCRAALVDDVLWLP 391
PA A A P P+A P P+P A A P+ PE PA +P A V +V P
Sbjct: 485 PAPAPAPAPAPEAAPAPEPAPAPA--PAPAPEAAPAAAPDAAPAEPAPVPEVAPAP 538
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 31.1 bits (67), Expect = 0.50
Identities = 22/93 (23%), Positives = 32/93 (34%)
Frame = +2
Query: 83 PLQPHREADDDQLADEYVQNFELDHLEDHNLVKREPLRGGAYELIQTPPACARALRPWPD 262
P P + E + EL + + + EP YE + + P
Sbjct: 178 PSSPSYNKVSFEYPPEKLNEAELRKVTKQEIEEEEPDEPTIYEDVSRKEEAPKK-EPKQQ 236
Query: 263 AGPYPQPHVAIAVDPSTPPETPPATIGRSPCRA 361
P+P +V P PP PP + R P RA
Sbjct: 237 DHVVPEPPREKSVPPPPPPPPPPKPVSREPSRA 269
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 221 TPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRAALVDD 376
TP A AL P P P P+ + + + P T P + RSP ALV D
Sbjct: 581 TPSAVVSAL-PTPMNSPLPRVTSSKSAQDVSTPSTTPNPVSRSPDPVALVKD 631
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 31.1 bits (67), Expect = 0.50
Identities = 22/93 (23%), Positives = 32/93 (34%)
Frame = +2
Query: 83 PLQPHREADDDQLADEYVQNFELDHLEDHNLVKREPLRGGAYELIQTPPACARALRPWPD 262
P P + E + EL + + + EP YE + + P
Sbjct: 178 PSSPSYNKVSFEYPPEKLNEAELRKVTKQEIEEEEPDEPTIYEDVSRKEEAPKK-EPKQQ 236
Query: 263 AGPYPQPHVAIAVDPSTPPETPPATIGRSPCRA 361
P+P +V P PP PP + R P RA
Sbjct: 237 DHVVPEPPREKSVPPPPPPPPPPKPVSREPSRA 269
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.7 bits (66), Expect = 0.66
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 176 VKREPLRGGAYELIQTPPACARA----LRPWPDAGPYPQPHVAIAVDPSTPPETPPATIG 343
V R+ GGA PA A A P P+ P P P A A P P P A G
Sbjct: 91 VARDYAEGGAAPAAPAEPASAPAPAPEAAPAPEPTPAPAPEAAPAPAPDAAPTAPAAGAG 150
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +2
Query: 176 VKREPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPC 355
V R+ GA PA A P P+A P P P A P P A G
Sbjct: 172 VARDYAEEGAAPAAPAEPAPVPAPEPAPEAAPAPAPEAAPVPAQDAAPAAPAADAGGYSA 231
Query: 356 RAA 364
AA
Sbjct: 232 GAA 234
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 30.7 bits (66), Expect = 0.66
Identities = 22/58 (37%), Positives = 26/58 (44%)
Frame = +2
Query: 176 VKREPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRS 349
V R+ GGA P A A P P+A P P P A+ PS P+ PA G S
Sbjct: 92 VARDYAEGGAAPTAPAEPVPAPA--PEPEAAPAPAPVAEPALAPS--PDAAPAADGAS 145
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 30.3 bits (65), Expect = 0.87
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 245 LRPWPDAGPY-PQPHVAIAVDPSTPPETPPATIGRS 349
LRP P A P P+P +A P TP TP + GRS
Sbjct: 317 LRPAPSAPPLSPEPAIAAVKTPKTPT-TPKTSKGRS 351
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 30.3 bits (65), Expect = 0.87
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 245 LRPWPDAGPY-PQPHVAIAVDPSTPPETPPATIGRS 349
LRP P A P P+P +A P TP TP + GRS
Sbjct: 317 LRPAPSAPPLSPEPAIAAVKTPKTPT-TPKTSKGRS 351
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 218 QTPPACARALRPWPDAGPYPQ---PHVAIAVDPSTPPETPPATIGRSPCR 358
+TPP + R P P PQ P + +P PP TPP+ I P R
Sbjct: 148 RTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 236 ARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
+R+ P P P P P + + P PP PP T+ ++P
Sbjct: 1331 SRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAP 1369
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 275 PQPHVAIAVDPSTPPETPPATIGRSPCRA 361
P+P +V P PP PP + R P RA
Sbjct: 256 PEPPREKSVPPPPPPPPPPKPVSREPSRA 284
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 248 RPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRAA 364
RP P A Y P P PP PP + G +P +A
Sbjct: 590 RPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSA 628
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 248 RPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRAA 364
RP P A Y P P PP PP + G +P +A
Sbjct: 416 RPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSA 454
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 275 PQPHVAIAVDPSTPPETPPATIGRSPCRA 361
P+P +V P PP PP + R P RA
Sbjct: 256 PEPPREKSVPPPPPPPPPPKPVSREPSRA 284
>Z70753-2|CAA94760.1| 275|Caenorhabditis elegans Hypothetical
protein F40F9.3 protein.
Length = 275
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = -1
Query: 230 PAAFVSIRTLRHEAAHVSPGCDLRDGPAQSSVRIHQRADRHQLRDAAAMEGFA*RSPESN 51
P S T E C L DG +R+ +R++L+ E P++
Sbjct: 203 PNPVPSAMTKNKEGKGERKACILEDGHKSVMIRMDNEENRNKLKKVEPKEPPRRLDPKTP 262
Query: 50 PRPRAP 33
P+P AP
Sbjct: 263 PKPAAP 268
>AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical
protein Y106G6H.1 protein.
Length = 453
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Frame = +2
Query: 128 EYVQNFELDHLEDHNLVKREPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDP 307
E + + E+D L ++ ++G E + P ++ D P PQP+ + P
Sbjct: 41 ETLASREIDRLVSLMSNSKDQIKGYNAEKLNYSPKLQDLIKIRDDQPPCPQPNATMFTTP 100
Query: 308 STP--PET--PPATIGRSPCRAALVD 373
+TP P T P T+ A D
Sbjct: 101 TTPAAPTTTADPTTVADDTTTAGATD 126
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 188 PLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPP 331
P+ G TPP + P P P P P A +PP PP
Sbjct: 447 PISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 269 PYPQPHVAIAVDPSTPPETPPATI 340
PYP+ H + V PS P PP +
Sbjct: 26 PYPRTHTTLMVIPSNRPPPPPQPV 49
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 224 PPACARALRPWPDA-GPYPQPHV--AIAVDPSTPPETPPATIGRSPC 355
PPA A A P+P A P P P++ +A P+ P P PC
Sbjct: 80 PPAPAPAYNPYPCATPPCPLPYIPEPVAPVPAPAPVYEPYACAAPPC 126
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 188 PLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPP 331
P+ G TPP + P P P P P A +PP PP
Sbjct: 454 PISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 309 VHLLKPLRRRLAVVHVVPP*LTMYSGYHI*ESLLTCVQCRVEVLKNGTGASGENKIITDN 488
+H +KP R ++ + P + ++ YH + R+E L+N A E K+ +
Sbjct: 486 IHTVKPKMRSNVILQAMLPVVNTHAEYH--ANQFEAYAHRIEALRNCLAAIFEGKVAFAS 543
Query: 489 KS 494
KS
Sbjct: 544 KS 545
>Z37140-6|CAA85501.1| 190|Caenorhabditis elegans Hypothetical
protein ZK899.7 protein.
Length = 190
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 107 DDDQLADEYVQNFELD 154
DDD++ DE +NFELD
Sbjct: 67 DDDEVFDEIAENFELD 82
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPA 334
PPA A P P + P+ P ++ V T P TP A
Sbjct: 1641 PPAAASIAAPTPISTPHAMPSPSVGV--QTAPPTPQA 1675
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPA 334
PPA A P P + P+ P ++ V T P TP A
Sbjct: 1558 PPAAASIAAPTPISTPHAMPSPSVGV--QTAPPTPQA 1592
>AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical
protein Y57G7A.6 protein.
Length = 883
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 472 LFSPLAPVPFFKTSTRHCTHVKRLSHMW*P 383
L P P+ +T T+H + +K+L +W P
Sbjct: 313 LLKPSFPLSGVRTLTKHASEMKKLDDLWKP 342
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 239 RALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCR 358
R +P A P P STPP PPA +SP R
Sbjct: 162 RPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSPKR 201
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 239 RALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCR 358
R +P A P P STPP PPA +SP R
Sbjct: 522 RPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSPKR 561
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
protein F55H12.3 protein.
Length = 2972
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 44 VVDCSQASAMQTLPLQPHREADDDQLADEYVQNFELDH 157
V+DCSQ A+ +LP + + Q DE + F+ DH
Sbjct: 685 VIDCSQGFALSSLPYIIQCNS-NGQWVDEDGKTFDADH 721
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 218 QTPPACARALRPWPDAGPYPQPHVAIAVDP-STPPETPPA 334
++ PA P P P P P+V + P T P PPA
Sbjct: 16 ESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPA 55
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 167 HNLVKREPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATI 340
H+ RE ++ G + P + R PD P ++A AV PP P + +
Sbjct: 231 HSPAARETVKEGPSTRNEQPLSIPRRPARIPDGAPSSSSYLAPAVPARAPPPVPQSPL 288
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 167 HNLVKREPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATI 340
H+ RE ++ G + P + R PD P ++A AV PP P + +
Sbjct: 411 HSPAARETVKEGPSTRNEQPLSIPRRPARIPDGAPSSSSYLAPAVPARAPPPVPQSPL 468
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,236,395
Number of Sequences: 27780
Number of extensions: 268904
Number of successful extensions: 1131
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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