Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E03f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.4  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   5.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   5.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   7.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = +2

Query: 251 PWPDAGPYPQPHVAIAVDPSTPPETPP 331
           P P   P+  P       P  P + PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPP 47


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 402 SLLTCVQCRVEVLKNGTG 455
           +LL C+Q  +E L +G G
Sbjct: 32  TLLDCIQSGIENLDSGVG 49


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 402 SLLTCVQCRVEVLKNGTG 455
           +LL C+Q  +E L +G G
Sbjct: 48  TLLDCIQSGIENLDSGVG 65


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 65  SPESNPRPRAPPWGRASCR 9
           S +  P PR PP+ R   R
Sbjct: 71  SQQDMPYPRFPPYNRMDMR 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,626
Number of Sequences: 438
Number of extensions: 2989
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)