Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E03f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58540.1 68418.m07330 protein kinase family protein contains ... 34 0.067
At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP glucosyl... 33 0.088
At1g10620.1 68414.m01204 protein kinase family protein contains ... 33 0.12
At1g31730.1 68414.m03893 epsilon-adaptin, putative similar to SP... 32 0.27
At5g38560.1 68418.m04662 protein kinase family protein contains ... 30 1.1
At3g22070.1 68416.m02785 proline-rich family protein contains pr... 29 1.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 1.4
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 29 1.9
At5g65660.1 68418.m08259 hydroxyproline-rich glycoprotein family... 29 2.5
At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identica... 29 2.5
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 29 2.5
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 29 2.5
At3g21215.1 68416.m02681 RNA-binding protein, putative contains ... 29 2.5
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 29 2.5
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 2.5
At1g64255.1 68414.m07280 SWIM zinc finger family protein contain... 29 2.5
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 29 2.5
At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family... 29 2.5
At3g25710.1 68416.m03199 basic helix-loop-helix (bHLH) family pr... 28 4.4
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 28 4.4
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 28 4.4
At2g05755.1 68415.m00619 integral membrane family protein contai... 28 4.4
At1g61080.1 68414.m06877 proline-rich family protein 28 4.4
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 27 5.8
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 27 5.8
At3g49650.1 68416.m05426 kinesin motor protein-related several k... 27 5.8
At2g30340.1 68415.m03692 LOB domain protein 13 / lateral organ b... 27 5.8
At2g26410.1 68415.m03169 calmodulin-binding family protein simil... 27 5.8
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 5.8
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 27 7.7
At4g34440.1 68417.m04894 protein kinase family protein contains ... 27 7.7
At3g24550.1 68416.m03083 protein kinase family protein contains ... 27 7.7
At3g15030.2 68416.m01902 TCP family transcription factor, putati... 27 7.7
At3g15030.1 68416.m01901 TCP family transcription factor, putati... 27 7.7
At2g01690.2 68415.m00097 expressed protein 27 7.7
At2g01690.1 68415.m00096 expressed protein 27 7.7
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 27 7.7
At1g47500.1 68414.m05272 RNA-binding protein 47 (RBP47), putativ... 27 7.7
>At5g58540.1 68418.m07330 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 484
Score = 33.9 bits (74), Expect = 0.067
Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +2
Query: 122 ADEYVQNFELDHLEDHNLVKREPLRGGAYELIQTP-PACARALRPWPDAGPYPQPHVAIA 298
+ E V+ F D +DH L++ + LI TP P AL DA P P P AI
Sbjct: 29 SQEIVEVF--DSSQDHFLIQSR-VYANHRSLIDTPLPGKDPAL----DASP-PSPESAIL 80
Query: 299 VDPSTPPETPPATIGRSPCRAALVDDVLWLPHMREPLDMRTVPCGS 436
DP PP P SP R+ + P PL + P S
Sbjct: 81 KDPLLPPPPPEGNETPSPPRSGVPTQTPETPPAITPLPVPLAPAPS 126
>At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP
glucosyltransferase (SUS2) nearly identical to SP|Q00917
Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP
glucosyltransferase) {Arabidopsis thaliana} (SUS2);
contains Pfam profile: PF00862 sucrose synthase
Length = 807
Score = 33.5 bits (73), Expect = 0.088
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 116 QLADEYVQNFELDH-LEDHNLVKREPLRGGAYELIQTPPACARALRPWPDAGPYPQPHV- 289
QL DE+++ ++D LED N + A E I PP A A+RP P Y + +V
Sbjct: 43 QLIDEFLKTVKVDGTLEDLNKSPFMKVLQSAEEAIVLPPFVALAIRPRPGVREYVRVNVY 102
Query: 290 AIAVDPSTPPE 322
++VD T E
Sbjct: 103 ELSVDHLTVSE 113
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 200 GAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPE-TPPATIGRSP 352
G E Q PPA + P PD P P A P+ PP TPP T SP
Sbjct: 36 GGSETTQ-PPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSSP 86
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 218 QTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
QT P A A +P P+ P P P TPP +PP +I P
Sbjct: 57 QTSPPPATAAQPPPNQPPNTTP-------PPTPPSSPPPSITPPP 94
>At1g31730.1 68414.m03893 epsilon-adaptin, putative similar to
SP|Q9UPM8 Adapter-related protein complex 4 epsilon 1
subunit (Epsilon subunit of AP-4) (AP-4 adapter complex
epsilon subunit) {Homo sapiens}; contains Pfam profile:
PF01602 Adaptin N terminal region
Length = 938
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 155 HLEDHNLVKREPLRGGAYELIQ--TPPACARALRPWPDAGPYPQPHVAIA 298
H +DH+ V LR AYEL + PP + L P P+ Y + H I+
Sbjct: 653 HPQDHHEVPTHALRFEAYELPKPSVPPQASNELVPVPEPSYYSESHQPIS 702
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIA-VDPSTPPETPPA 334
PP+ P P P P V IA PSTP TPPA
Sbjct: 71 PPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPA 108
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 221 TPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
TPPA + + P P P P +P PP+ P+ G +P
Sbjct: 105 TPPAPPQTVSPPPPPDASPSPPAPTTTNP--PPKPSPSPPGETP 146
>At3g22070.1 68416.m02785 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 178
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 209 ELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPC--RAALVDD 376
E PP P P + P P A ++PP TPP+++ SP A LV+D
Sbjct: 121 EFSPPPPDLDTTTAPPPPSTDIPIPPPPPAPVSASPPLTPPSSVVTSPAPVHAKLVND 178
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPP 331
PP A+ P P P P P PS PP PP
Sbjct: 588 PPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPP 623
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1 RNA
helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 29.1 bits (62), Expect = 1.9
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 197 GGAYELIQTPPACAR-ALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRA 361
GG+Y L PP AR L P AG YP P V ++ P PP P A R P A
Sbjct: 976 GGSY-LPSGPPNGARPGLHP---AG-YPIPRVPLSPFPGGPPSQPYAIPTRGPVGA 1026
>At5g65660.1 68418.m08259 hydroxyproline-rich glycoprotein family
protein
Length = 136
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 251 PWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
P P A P P+ + VD TPP++PP R P
Sbjct: 102 PCPCAPPRPEK---LTVDVQTPPQSPPVKPARFP 132
>At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identical
to gi:3883120 gb:AAC77823
Length = 131
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 188 PLRGGAYELIQTP-PACARALRPWPDAGPYPQPHVAIAVDPSTPPETPP 331
P G + P P A P P+ P P P A+ + S P +PP
Sbjct: 29 PSNVGGRRISPAPSPKKMTAPAPAPEVSPSPSPAAALTPESSASPPSPP 77
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 248 RPWPDAGPYPQPHVAIAVDPSTPPETPPA 334
RP P P P H + P PP PPA
Sbjct: 688 RPPPPPPPPPMQHSTVTKVPPPPPPAPPA 716
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 233 CARALRPWPDAGPYPQPHVAIAVDPSTPPETPP 331
CA L +P AG P PH + P PP +PP
Sbjct: 1114 CATELPSFP-AGSPPLPHESPPSPPPQPPSSPP 1145
>At3g21215.1 68416.m02681 RNA-binding protein, putative contains RNA
recognition motif, Pfam:PF00076; contains AT-AC splice
sites at intron 8
Length = 339
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 254 WPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRAALVDDVLWLPHMREPLD-MRTV 424
WP AG P P AV + PP PP P LVD+ H R P D +RT+
Sbjct: 13 WPPAGAPPPP---AAVSSAAPPHPPPIH-HHPPPPPVLVDN-----HNRPPYDELRTI 61
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
PP + P P P P P +A+ TP PP G SP
Sbjct: 227 PPPQVKQSEPTP---PPPPPSIAVKQSAPTPSPPPPIKKGSSP 266
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPP 331
PPA P P P VA + P+TPP PP
Sbjct: 66 PPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPP 101
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 221 TPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPAT 337
TPP A+ P P P ++ A P PP++PPA+
Sbjct: 72 TPPP---AVTPTSPPAPKVAPVISPATPPPQPPQSPPAS 107
>At1g64255.1 68414.m07280 SWIM zinc finger family protein contains
Pfam profile PF04434: SWIM zinc finger
Length = 750
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 254 WPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCR 358
WP+A P+ + V P +PP +PP + + CR
Sbjct: 708 WPEASGVPR--LLPPVIPPSPPPSPPTYVSGTKCR 740
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPAT 337
PP P P P P P V ++V+ PP PP T
Sbjct: 45 PPPPPPPPPPPPPPPPPPPPAVNMSVETGIPPPPPPVT 82
>At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family
protein
Length = 846
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 263 AGPYPQPHVAIAVDPSTPPET 325
+GPYP H A P PPET
Sbjct: 733 SGPYPSVHQPTASSPPPPPET 753
>At3g25710.1 68416.m03199 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 344
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 98 READDDQLADEYVQNFELDHLEDHN 172
RE DD++ D Y +NF+ D +ED++
Sbjct: 262 REYDDEEDHDSYRRNFDGDDVEDYD 286
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +2
Query: 227 PACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
P + P P P+P P I P+ PP + P + P
Sbjct: 94 PPTVKPPHPKPPTKPHPHPKPPIVKPPTKPPPSTPKPPTKPP 135
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 221 TPPACARALRPWPDAGPYPQPHVAIAVDPSTP-PETPPATIGRSP 352
TPPA + P P P P ++ P TP P P T SP
Sbjct: 73 TPPAPVPPVSPPPPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSP 117
>At2g05755.1 68415.m00619 integral membrane family protein contains
Pfam PF00892: Integral membrane protein domain
Length = 401
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 454 PVPFFKTSTRHCTHVKRLSHMW 389
P+P F+T+ CT + LS++W
Sbjct: 122 PIPLFETAFMRCTIILILSYLW 143
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = +2
Query: 185 EPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
+PL+G A PP P P P P P A+A PP PP T P
Sbjct: 501 KPLKGSAPPPPPPPPLPTTIAAPPP---PPPPPRAAVA---PPPPPPPPGTAAAPP 550
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 230 ACAR--ALRPWPD--AGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
AC R A+ P P GPYP P + PS P PP+ G +P
Sbjct: 609 ACCRIPAVNPPPRLVCGPYPLPRLVRVGSPSPP---PPSMSGGAP 650
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
PP C +P P P P+V PS+PP +P + P
Sbjct: 392 PPPCPDVYKPPPYVYSSPPPYV-YNPPPSSPPPSPSYSYSSPP 433
>At3g49650.1 68416.m05426 kinesin motor protein-related several
kinesin-like proteins
Length = 813
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 117 SSLMNTYRTLSWTISKITTW*NVSRFVAERTN*YKRRRHVLVLSDPGLM 263
S+ N YR++S IS + N + F T K V SDPGLM
Sbjct: 76 STNKNVYRSMSSVISSVVHGLNATVFAYGSTGSGKTYTMVGTRSDPGLM 124
>At2g30340.1 68415.m03692 LOB domain protein 13 / lateral organ
boundaries domain protein 13 (LBD13) identical to LOB
DOMAIN 13 [Arabidopsis thaliana] GI:17227158 SP|Q9AT61
Length = 268
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 230 ACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATI 340
A A L P P P P+P ++ P+ PP TPP ++
Sbjct: 187 ASAILLPPPPPPPPTPRPPRLLSSQPA-PPPTPPVSL 222
>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 516
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 206 YELIQTPP---ACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPA 334
+ L +TPP + + RP+P P P + P +PP PPA
Sbjct: 34 FPLEETPPVDPSPSSVHRPYPPPPPLPDFAPQPLLPPPSPPPPPPA 79
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 188 PLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPAT 337
PL + L +PP+ + + P P P ++++ PS+PP PP++
Sbjct: 77 PLSSLSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLS--PSSPPPPPPSS 124
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +2
Query: 200 GAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
GAY L+ PP +R P P P + P PP PP R+P
Sbjct: 8 GAYSLVPLPPPPPPLMRRRAPLPPPPPPPLMRRRAP--PPPPPPLMRRRAP 56
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 221 TPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETP 328
+PP A P+ P P + V P PP+TP
Sbjct: 75 SPPVVANPSPQTPENPSPPAPEGSTPVTPPAPPQTP 110
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 224 PPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSP 352
PP+ P P PQP + + PS P T P+ RSP
Sbjct: 61 PPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSN-PRSP 102
>At3g15030.2 68416.m01902 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 347 YGQSSPEGFQEVYWDQQ 297
YGQS+P GF W+QQ
Sbjct: 260 YGQSNPLGFDTSSWEQQ 276
>At3g15030.1 68416.m01901 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 347 YGQSSPEGFQEVYWDQQ 297
YGQS+P GF W+QQ
Sbjct: 260 YGQSNPLGFDTSSWEQQ 276
>At2g01690.2 68415.m00097 expressed protein
Length = 744
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 60 RRALCKPFHCSRIAKLMTISSLMNTYRT 143
RR L F +RI L IS+L+N +RT
Sbjct: 345 RRQLSSEFEATRIEALNWISTLLNKHRT 372
>At2g01690.1 68415.m00096 expressed protein
Length = 743
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 60 RRALCKPFHCSRIAKLMTISSLMNTYRT 143
RR L F +RI L IS+L+N +RT
Sbjct: 344 RRQLSSEFEATRIEALNWISTLLNKHRT 371
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 251 PWPDAGPYPQPHVAIAVDPSTPPETPP 331
P P P P+P A P PP PP
Sbjct: 46 PPPSPSPEPEPEPADCPPPPPPPPCPP 72
>At1g47500.1 68414.m05272 RNA-binding protein 47 (RBP47), putative
similar to DNA binding protein GI:1899187 from
[Nicotiana tabacum]
Length = 434
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 269 PYPQPHVAIAVD---PSTPPETPPATIGRSPCRAALVDDVLWLP 391
PYP PH + V+ P T P PP R P L+ +++ P
Sbjct: 26 PYPPPHPPVEVEENQPKTSPTPPPPHWMRYP--PVLMPQMMYAP 67
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,674,215
Number of Sequences: 28952
Number of extensions: 252894
Number of successful extensions: 1168
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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