Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307E02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68010-2|CAA92010.2|  433|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    28   4.7  
AB236333-1|BAE45265.1|  433|Caenorhabditis elegans MBlk-1 Relate...    28   4.7  
Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cycl...    27   6.2  

>Z68010-2|CAA92010.2|  433|Caenorhabditis elegans Hypothetical
           protein T01C1.2 protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 330 IMTSCIDAKRSSKSHSKPPVAMPISV 253
           ++TS I  K  S SH+  P+  PIS+
Sbjct: 407 LVTSTISEKSDSSSHTSTPIPFPISL 432


>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical
           protein F25F2.2 protein.
          Length = 4307

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 44  LKMSVVVIAIATDSGVPIFSRKRGNSDTV-QFSTLASLHGIN 166
           L  + +  AI + +G+   S K   S+ V  F  +ASLHGIN
Sbjct: 429 LPNATLPFAIGSKNGILRVSAKINRSERVYNFKVIASLHGIN 470


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical
           protein F25F2.2 protein.
          Length = 4307

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 44  LKMSVVVIAIATDSGVPIFSRKRGNSDTV-QFSTLASLHGIN 166
           L  + +  AI + +G+   S K   S+ V  F  +ASLHGIN
Sbjct: 429 LPNATLPFAIGSKNGILRVSAKINRSERVYNFKVIASLHGIN 470


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
           protein F25F2.2 protein.
          Length = 4307

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 44  LKMSVVVIAIATDSGVPIFSRKRGNSDTV-QFSTLASLHGIN 166
           L  + +  AI + +G+   S K   S+ V  F  +ASLHGIN
Sbjct: 429 LPNATLPFAIGSKNGILRVSAKINRSERVYNFKVIASLHGIN 470


>AB236333-1|BAE45265.1|  433|Caenorhabditis elegans MBlk-1 Related
           factor-1 protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 330 IMTSCIDAKRSSKSHSKPPVAMPISV 253
           ++TS I  K  S SH+  P+  PIS+
Sbjct: 407 LVTSTISEKSDSSSHTSTPIPFPISL 432


>Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical
           protein R01E6.1 protein.
          Length = 1014

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 128 VQFSTLASLHGINMFTKCHNLTMLNTLVDNGKILWKEYC 244
           +Q   LA  +GI +      +T+L+TLV+ G +  +E+C
Sbjct: 523 LQHDNLAKFYGIQVNDDIMTMTILHTLVERGTL--EEFC 559


>AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1017

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 128 VQFSTLASLHGINMFTKCHNLTMLNTLVDNGKILWKEYC 244
           +Q   LA  +GI +      +T+L+TLV+ G +  +E+C
Sbjct: 526 LQHDNLAKFYGIQVNDDIMTMTILHTLVERGTL--EEFC 562


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,411,934
Number of Sequences: 27780
Number of extensions: 230109
Number of successful extensions: 701
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)