Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E02f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 26 0.27
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 0.82
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 24 0.82
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.9
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 1.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 3.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 3.3
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 22 4.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 4.4
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 21 7.7
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.8 bits (54), Expect = 0.27
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = -3
Query: 219 PLSTSVFNIV----KLWHLVNMLIPCNDANVENCTVSLLPRFL-ENIGTPLSVAMAIT 61
P VFNI L++ VN++IPC + + V LP E + +S+ +++T
Sbjct: 222 PYPDIVFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLT 279
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 24.2 bits (50), Expect = 0.82
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 186 LWHLVNMLIPCNDANVENCTVSLLPRFL-ENIGTPLSVAMAIT 61
L++ VN++IPC + V LP E + +S+ +++T
Sbjct: 241 LFYTVNLIIPCMGISFLTVLVFYLPSDSGEKVSLSISILLSLT 283
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.2 bits (50), Expect = 0.82
Identities = 16/80 (20%), Positives = 31/80 (38%)
Frame = -3
Query: 267 MPISVTLLQYSFHNILPLSTSVFNIVKLWHLVNMLIPCNDANVENCTVSLLPRFLENIGT 88
+P S T + L S++ V +W ++ +++ P I +
Sbjct: 119 LPFSATWEVFKVWIFGDLWCSIWLAVDVWMCTASILNLCAISLDRYLAVTRPVSYPQIMS 178
Query: 87 PLSVAMAITTTDIFNFIICF 28
P + + T I +F+ICF
Sbjct: 179 PRRARLLVATVWILSFVICF 198
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNNNY 105
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNNNY 105
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 1.9
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = -3
Query: 219 PLSTSVFNIVK----LWHLVNMLIPCNDANVENCTVSLLPRFL-ENIGTPLSVAMAIT 61
P S FNI L++ VN++IPC V LP E + S+ +++T
Sbjct: 235 PYSDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSLCSSILLSLT 292
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRHF 47
++S Y Y+ + Y N YN ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.2 bits (45), Expect = 3.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 268 YADKCDALTVLLP*YFAIINKRIQHC 191
+AD CD L VL I N IQ C
Sbjct: 134 HADSCDRLWVLDTGTIGIGNTTIQAC 159
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRH 50
++S Y Y+ + Y N YN +
Sbjct: 315 ISSLSNNYKYSNYNNYNNNYNNY 337
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 431 SLDPNAISSPLPTLVLDLVQSFLC 502
SLD N + S T V+ ++ F+C
Sbjct: 146 SLDLNKVVSVFYTAVIPMLNPFIC 169
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = -2
Query: 118 VASFPRKYWYTTISGYGNYYNRH 50
++S Y Y+ + Y N YN +
Sbjct: 82 ISSLSNNYNYSNYNNYNNNYNNY 104
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 431 SLDPNAISSPLPTLVLDLVQSFLC 502
SLD N + S T V+ + F+C
Sbjct: 145 SLDLNKVVSVFYTAVIPMFSPFIC 168
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,204
Number of Sequences: 438
Number of extensions: 2741
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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