Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307E02f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38750.1 68417.m05488 expressed protein 29 2.5
At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR... 29 2.5
At1g10400.1 68414.m01172 UDP-glucoronosyl/UDP-glucosyl transfera... 29 2.5
At4g12700.1 68417.m01994 expressed protein 28 3.3
At3g44820.1 68416.m04829 phototropic-responsive NPH3 family prot... 28 4.4
At5g07650.1 68418.m00876 formin homology 2 domain-containing pro... 27 7.7
At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR... 27 7.7
At3g50370.1 68416.m05508 expressed protein 27 7.7
At2g23180.1 68415.m02769 cytochrome P450, putative 27 7.7
>At4g38750.1 68417.m05488 expressed protein
Length = 1073
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 171 NMLIPCNDANVENCTVSLLPRFLENIGTPLSVAMAITTTDIF--NFI 37
+M++ + A + + T+ LLP +G P + + +TT D+ NF+
Sbjct: 588 HMVLAKDFAEISDATIGLLPLLCNFMGNPEYLTLCLTTVDLILRNFL 634
>At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1147
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 137 STLASLHGINMFTKCHNLTMLNTLVDNGKILWKEYCKSVTLIGIATGGLECDLELL 304
S +L +N+ +KC +L L + + N L YC V LI + + C+LE L
Sbjct: 650 SLAINLEELNL-SKCESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYL 704
>At1g10400.1 68414.m01172 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 365
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +2
Query: 185 NLTMLNTLVDNGKILW-KEYCKSVTLIGIATGGLECDLELLLASIHDVMIFCIGKKELET 361
+L ++ +V +G + W +E + + + G+ C ++ S+ + K E E
Sbjct: 11 SLPRVSFMVSDGFLWWTQESARKLGFPRLVFFGMNCASTVICDSVFQNQLLSNVKSETEP 70
Query: 362 LKNVDQTKRDLRQCYPLIDYLLESLDPNAISSPLPTLVLDLVQS 493
+ + +R+C D++ + DP + P L+LD V S
Sbjct: 71 VSVPEFPWIKVRKC----DFVKDMFDPKTTTDPGFKLILDQVTS 110
>At4g12700.1 68417.m01994 expressed protein
Length = 561
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 209 VDNGKILWKEYCKSVTLIGIATGGLECDLELLLASIHDVMIFCIGKKELETLKNVDQTKR 388
+D K LW E + + GG + + + + D +F GKK++ET ++ R
Sbjct: 491 LDEFKDLWDESSEWYSETTKLNGGNPVEFDGYMRASVDTEVFLRGKKQIETFNDLTNDCR 550
Query: 389 D 391
D
Sbjct: 551 D 551
>At3g44820.1 68416.m04829 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 661
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +2
Query: 293 LELLLASIHDVMIFCIGKKELETLKNVDQTKRDLRQCYPLID-YLLE-SLDPNAISSPLP 466
++L LA++ +++I + + ETL NVD +R +R + L+D Y+ E + D N +
Sbjct: 385 MQLELATLDNLLI--LNYSDSETLYNVDCVERIVRHFWRLVDSYMAEVASDVNLKPDKMR 442
Query: 467 TLVLDLVQS 493
+L L +S
Sbjct: 443 SLAAALPES 451
>At5g07650.1 68418.m00876 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 815
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 314 IHDVMIFCIGKKELETLKNVDQTKRDLRQCYPL 412
I +++ FC K+E+E LKN K L +C L
Sbjct: 509 IENLIRFCPTKEEMELLKNYTGDKATLGKCEQL 541
>At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1304
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 137 STLASLHGINMFTKCHNLTMLNTLVDNGKILWKEYCKSVTLIGIATGGLECDLELL 304
S +L +N+ ++C +L L + + N L YC V LI + + C+LE L
Sbjct: 633 SLAINLEELNL-SECESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYL 687
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 338 IGKKELETLKNVDQTKRDLRQCYPLIDYLLESLDPNAISSPLP 466
IG++ E VD T +P+I +L P+++ + +P
Sbjct: 1080 IGRQSFEVASKVDSTSNSTVSTHPVIPLHSAALHPSSLQTAIP 1122
>At2g23180.1 68415.m02769 cytochrome P450, putative
Length = 516
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 335 CIGKKELETLK---NVDQTKRDLRQCYPLIDYLLESLDPNAISSPLPTLVLDLVQSFL 499
CI K E N+D + +DL CY +D + + ++ + D++ SF+
Sbjct: 256 CIASKRDEITNGVINIDSSSKDLLMCYMNVDTICHTTKYKLLNPSDDKFLRDMILSFM 313
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,452,973
Number of Sequences: 28952
Number of extensions: 204029
Number of successful extensions: 612
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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