Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D11f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    96   6e-22
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.2  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   8.2  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 96.3 bits (229), Expect = 6e-22
 Identities = 51/145 (35%), Positives = 85/145 (58%), Gaps = 3/145 (2%)
 Frame = +3

Query: 48  WKEVDYEWNTPAERENAIKSGDFVPANNLPLGLGRWKNKLFVTVPKWKNGVASSLNYVDL 227
           W+ V+Y+   PAE     +   ++P  N+P+G    KN++FV V + + G+ S+LN VDL
Sbjct: 29  WQRVEYD--VPAEVLQ--RENGYIPIGNIPMGAVHHKNRVFVAVARRRWGIPSTLNVVDL 84

Query: 228 NG---TSDQLLKPYPSLKDNFIPDSAKDLPSNKTIISVFRIYIDPCDRLWVMDTGLADIW 398
           +     ++ +LKPYP+   N +    +  P    I++V+R  +D CDRLW +DTG+ +I 
Sbjct: 85  SPPFPNTNVILKPYPNFALNELRADLQ--PDANRIVTVYRPRVDRCDRLWFVDTGMMEIP 142

Query: 399 GAGNQIVRPSIVIFDLKTDQLLHRY 473
           G    + RPS+   DL T++ +HR+
Sbjct: 143 GNFTVVQRPSVWSIDLNTNEPIHRF 167


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 135  PLGLGRWKNKLFVTVPKWKNGVA 203
            P G    +N  F+ +P+W NG A
Sbjct: 1125 PTGYPEKENDDFIHMPRWFNGSA 1147


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 192  SSTWAPLQTICFSIALSPKAN 130
            ++ W  L+   F +++SPK N
Sbjct: 2863 ATVWGALEGASFGLSISPKLN 2883


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -3

Query: 306 ANPLLNPE*SCLLAMDTALEVDLRYHSNQHNSTKKRHHSSTW 181
           A PLL    +C++ M  +  V      N H+     H  S W
Sbjct: 273 AVPLLGTYFNCIMFMVASSVVSTILILNYHHRNSDTHEMSEW 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,711
Number of Sequences: 2352
Number of extensions: 12767
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)