Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72515-5|CAH60771.2|  331|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z78546-5|CAO79773.1|  962|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr...    27   8.1  
X74228-1|CAA52299.1|  491|Caenorhabditis elegans pha-1 protein.        27   8.1  
X73845-1|CAA52066.1|  491|Caenorhabditis elegans pha1 protein.         27   8.1  
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.      27   8.1  
AL032642-5|CAD91711.1|  453|Caenorhabditis elegans Hypothetical ...    27   8.1  
AL032642-4|CAA21655.1|  491|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z72515-5|CAH60771.2|  331|Caenorhabditis elegans Hypothetical
           protein T11A5.7 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 304 CHQIKLLFQCLEFTLTLVTDFGLWI-LVLLIFGVQETKLSDHL 429
           C  I  +++C  FTL L+ +FG+W+ +   +  V E  L+ HL
Sbjct: 90  CAMIPNIYRC--FTLRLMYNFGMWVTMCTAVPLVLERTLATHL 130


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -3

Query: 252 LEVDLRYHSNQHNSTKKRHHSSTWAPLQTICFSIALSPKANYSLVQSHHF 103
           +E +LR    +    K   H+ TW   Q +  S++L  K  Y+L  ++ F
Sbjct: 371 MEEELRDKIRKKIDDKVNEHNGTWIDWQYLHKSVSLLTKCRYTLQYTYPF 420


>Z78546-5|CAO79773.1|  962|Caenorhabditis elegans Hypothetical
           protein T21H8.1b protein.
          Length = 962

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +3

Query: 129 NLPLGLGRWKNKLFVTVPKWKNGVASSLNYVDLNGTSDQLLKPYP 263
           +LP G+G+  + L  T+P  K  VAS  +  +L G+   + +P P
Sbjct: 499 SLPRGVGKASSTL--TLPSKKLSVASGTSVGELGGSMSSVAQPTP 541


>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
           protein R03E1.1 protein.
          Length = 1043

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 207 KKRHHSSTWAPLQTICFSIALSPK 136
           + RH SSTW P  + C  I+ S +
Sbjct: 211 ESRHRSSTWTPTDSSCSGISPSTR 234


>X74228-1|CAA52299.1|  491|Caenorhabditis elegans pha-1 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 219 VDLNGTSDQLLKPYPSLKDNFIPDSAKDLPSNKTII 326
           + L    +Q +K   SL DNFI ++ +  PSNK  +
Sbjct: 355 LQLTKVVEQQIKNRKSLFDNFIANARRIFPSNKITV 390


>X73845-1|CAA52066.1|  491|Caenorhabditis elegans pha1 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 219 VDLNGTSDQLLKPYPSLKDNFIPDSAKDLPSNKTII 326
           + L    +Q +K   SL DNFI ++ +  PSNK  +
Sbjct: 355 LQLTKVVEQQIKNRKSLFDNFIANARRIFPSNKITV 390


>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
          Length = 1043

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 207 KKRHHSSTWAPLQTICFSIALSPK 136
           + RH SSTW P  + C  I+ S +
Sbjct: 211 ESRHRSSTWTPTDSSCSGISPSTR 234


>AL032642-5|CAD91711.1|  453|Caenorhabditis elegans Hypothetical
           protein Y48A6C.5b protein.
          Length = 453

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 219 VDLNGTSDQLLKPYPSLKDNFIPDSAKDLPSNKTII 326
           + L    +Q +K   SL DNFI ++ +  PSNK  +
Sbjct: 317 LQLTKVVEQQIKNRKSLFDNFIANARRIFPSNKITV 352


>AL032642-4|CAA21655.1|  491|Caenorhabditis elegans Hypothetical
           protein Y48A6C.5a protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 219 VDLNGTSDQLLKPYPSLKDNFIPDSAKDLPSNKTII 326
           + L    +Q +K   SL DNFI ++ +  PSNK  +
Sbjct: 355 LQLTKVVEQQIKNRKSLFDNFIANARRIFPSNKITV 390


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,341,916
Number of Sequences: 27780
Number of extensions: 271068
Number of successful extensions: 769
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)