Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D09f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    26   0.23 
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    24   0.94 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.94 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   6.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = +1

Query: 367 FASAMLLLFPKKVRSVFVCSLYTILVFLLKLLYGIRIC--VFYF 492
           F + + LL  +K+R     +LY +L+F++ +LY + +C  V+Y+
Sbjct: 83  FLANLKLLKGRKIRK----NLYYLLLFVINVLYVLTLCYAVYYW 122


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 51  PSYLPRSHSWSPVSLL*RSCWPASTPRPVTKW 146
           PS  P   S  P+SL+ R C   +  +P   W
Sbjct: 218 PSQSPEPESVRPLSLVVRRCEEPTEEKPWRPW 249


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 58  TCQDLTPGRRYHCSEEAAG 114
           TC+D+    R HCS+  +G
Sbjct: 160 TCEDIGNSHRCHCSDGYSG 178


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 146 VAHPHHEEHYASSGHGWGRSIDD---AQNMAYSAHIKSD*ITAQKFFGPPFK 292
           ++HP H   YA +  G GRS D      N+ ++  +    +  ++F  PP K
Sbjct: 593 LSHPFHLHGYAFNVIGIGRSPDQNVKKINLKHALDLDRQGLLHRQFNLPPAK 644


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 146 VAHPHHEEHYASSGHGWGRSID 211
           ++HP H   YA +  G GRS D
Sbjct: 593 LSHPFHLHGYAFNVVGIGRSPD 614


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 507 VTKLLEIKYTNTDTVQEFQEKY*YSIKRTYKNRTNFF 397
           V  +L I  T +    E ++KY      TY +  NFF
Sbjct: 325 VEHILSIVNTCSQIPSEVEDKYTTYFLNTYPHLFNFF 361


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 152 HPHHEEHYASS 184
           HPH  +HY ++
Sbjct: 23  HPHQHQHYGAA 33


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 152 HPHHEEHYASS 184
           HPH  +HY ++
Sbjct: 23  HPHQHQHYGAA 33


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 464 TVSVFVYFISKSFVTYF 514
           ++SVF +F   SFV  F
Sbjct: 213 SISVFSFFFMPSFVDIF 229


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 455 NSCTVSVFVYFISKSFVTY 511
           +S  V +F Y+I +SF  Y
Sbjct: 137 SSVGVRMFQYYIGRSFTYY 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,097
Number of Sequences: 336
Number of extensions: 2381
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)