Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D09f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110824-1|AAI10825.1|  212|Homo sapiens tumor suppressor candid...    32   1.4  
BC046919-1|AAH46919.1|  204|Homo sapiens TUSC1 protein protein.        32   1.4  
BC028316-1|AAH28316.1|   90|Homo sapiens TUSC1 protein protein.        32   1.4  
BC017510-1|AAH17510.1|  182|Homo sapiens TUSC1 protein protein.        31   2.4  
AY168647-1|AAO38227.2|  209|Homo sapiens TUSC1 protein.                31   2.4  
AK127534-1|BAC87022.1|  166|Homo sapiens protein ( Homo sapiens ...    30   4.3  

>BC110824-1|AAI10825.1|  212|Homo sapiens tumor suppressor candidate
           1 protein.
          Length = 212

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +1

Query: 67  DLTPGRRYHCSEEAAGQQAHRDQLRSGRPSSPRGALRKQRPRLGQVYR 210
           D TP       EEA+  +  RD  R   P SPR ALR +  +L  +YR
Sbjct: 123 DGTPAEARRVPEEASTNRRARDSGREDEPGSPR-ALRARLEKLEAMYR 169


>BC046919-1|AAH46919.1|  204|Homo sapiens TUSC1 protein protein.
          Length = 204

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +1

Query: 67  DLTPGRRYHCSEEAAGQQAHRDQLRSGRPSSPRGALRKQRPRLGQVYR 210
           D TP       EEA+  +  RD  R   P SPR ALR +  +L  +YR
Sbjct: 115 DGTPAEARRVPEEASTNRRARDSGREDEPGSPR-ALRARLEKLEAMYR 161


>BC028316-1|AAH28316.1|   90|Homo sapiens TUSC1 protein protein.
          Length = 90

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +1

Query: 67  DLTPGRRYHCSEEAAGQQAHRDQLRSGRPSSPRGALRKQRPRLGQVYR 210
           D TP       EEA+  +  RD  R   P SPR ALR +  +L  +YR
Sbjct: 1   DGTPAEARRVPEEASTNRRARDSGREDEPGSPR-ALRARLEKLEAMYR 47


>BC017510-1|AAH17510.1|  182|Homo sapiens TUSC1 protein protein.
          Length = 182

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 73  TPGRRYHCSEEAAGQQAHRDQLRSGRPSSPRGALRKQRPRLGQVYR 210
           TP       EEA+  +  RD  R   P SPR ALR +  +L  +YR
Sbjct: 95  TPAEARRVPEEASTNRRARDSGREDEPGSPR-ALRARLEKLEAMYR 139


>AY168647-1|AAO38227.2|  209|Homo sapiens TUSC1 protein.
          Length = 209

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 73  TPGRRYHCSEEAAGQQAHRDQLRSGRPSSPRGALRKQRPRLGQVYR 210
           TP       EEA+  +  RD  R   P SPR ALR +  +L  +YR
Sbjct: 122 TPAEARRVPEEASTNRRARDSGREDEPGSPR-ALRARLEKLEAMYR 166


>AK127534-1|BAC87022.1|  166|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45627 fis, clone CERVX2000812. ).
          Length = 166

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 73  TPGRRYHCSEEAAGQQAHRDQLRSGRPSSPRGALRKQR-PRLGQVYR*RPKHG 228
           +P RRY  + EA    A   + +S R SS +   RKQR PR  +V    P+ G
Sbjct: 106 SPARRYRPATEATLLTAGPARTKSARSSSRKADSRKQRDPRTSRVASGPPRTG 158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,824,874
Number of Sequences: 237096
Number of extensions: 1462189
Number of successful extensions: 3808
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3792
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)