Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p pro...    48   8e-06
AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA...    48   8e-06
BT016007-1|AAV36892.1|  288|Drosophila melanogaster RE26656p pro...    44   1e-04
AE014297-419|AAF51902.1|  288|Drosophila melanogaster CG1153-PA ...    44   1e-04
AE014297-424|AAF51898.1|  302|Drosophila melanogaster CG15596-PA...    32   0.41 
X78421-1|CAA55186.1|  805|Drosophila melanogaster E2F protein.         30   1.7  
U10184-1|AAA19003.1|  805|Drosophila melanogaster drosE2F1 protein.    30   1.7  
BT016096-1|AAV36981.1|  805|Drosophila melanogaster LD35741p pro...    30   1.7  
AE014297-3023|AAN13879.1|  805|Drosophila melanogaster CG6376-PC...    30   1.7  
AE014297-3022|AAN13878.1|  805|Drosophila melanogaster CG6376-PB...    30   1.7  
AE014297-3021|AAF55904.1|  805|Drosophila melanogaster CG6376-PA...    30   1.7  
AB011813-2|BAA32746.1|  805|Drosophila melanogaster E2F protein.       30   1.7  
AE014134-2062|AAF53094.1|  282|Drosophila melanogaster CG14925-P...    30   2.2  
AY122110-1|AAM52622.1|  590|Drosophila melanogaster GH12419p pro...    29   3.8  
AE014298-3087|AAZ52506.1|  590|Drosophila melanogaster CG11566-P...    29   3.8  

>AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p
           protein.
          Length = 233

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
 Frame = +2

Query: 86  GIIALKKLLASKHTETSYEVVAHPHHEEHYASSGHGWGRSI--DD--AQNMAYSAH 241
           GII LKKLL SK  + +YEVVAHPH+E       H +GRS+  DD  AQ +AY+A+
Sbjct: 183 GIIGLKKLLESK--KENYEVVAHPHYEHE-----HSYGRSLPSDDSQAQQLAYAAY 231


>AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA
           protein.
          Length = 233

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
 Frame = +2

Query: 86  GIIALKKLLASKHTETSYEVVAHPHHEEHYASSGHGWGRSI--DD--AQNMAYSAH 241
           GII LKKLL SK  + +YEVVAHPH+E       H +GRS+  DD  AQ +AY+A+
Sbjct: 183 GIIGLKKLLESK--KENYEVVAHPHYEHE-----HSYGRSLPSDDSQAQQLAYAAY 231


>BT016007-1|AAV36892.1|  288|Drosophila melanogaster RE26656p
           protein.
          Length = 288

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 23/73 (31%)
 Frame = +2

Query: 89  IIALKKLLASKHTETSYEVVAHPHHEE----------------------HYASSGH-GWG 199
           +I LKKLL S+    +YEVVAHPHH                         Y SSGH GWG
Sbjct: 212 VIGLKKLL-SQEKHVTYEVVAHPHHSSSHSTSHDSYGSGYSADAGASSASYGSSGHGGWG 270

Query: 200 RSIDDAQNMAYSA 238
           RSI DAQ++AY A
Sbjct: 271 RSI-DAQDLAYGA 282


>AE014297-419|AAF51902.1|  288|Drosophila melanogaster CG1153-PA
           protein.
          Length = 288

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 23/73 (31%)
 Frame = +2

Query: 89  IIALKKLLASKHTETSYEVVAHPHHEE----------------------HYASSGH-GWG 199
           +I LKKLL S+    +YEVVAHPHH                         Y SSGH GWG
Sbjct: 212 VIGLKKLL-SQEKHVTYEVVAHPHHSSSHSTSHDSYGSGYSADAGASSASYGSSGHGGWG 270

Query: 200 RSIDDAQNMAYSA 238
           RSI DAQ++AY A
Sbjct: 271 RSI-DAQDLAYGA 282


>AE014297-424|AAF51898.1|  302|Drosophila melanogaster CG15596-PA
           protein.
          Length = 302

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 17/67 (25%)
 Frame = +2

Query: 89  IIALKKLLASKHTE-TSYEVVAHPH----------HEEHYASSGHGWG---RSIDD---A 217
           II LKKL+     E T+YE+V HP           H+  Y + GH  G   RSIDD    
Sbjct: 219 IIGLKKLVGHDGGEKTTYEIVKHPQVQQSHTYSSSHQGEYDTGGHDGGSYHRSIDDEMMM 278

Query: 218 QNMAYSA 238
           Q+ AY A
Sbjct: 279 QDKAYQA 285


>X78421-1|CAA55186.1|  805|Drosophila melanogaster E2F protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 113 ASKHTETSYEVVAHPHHEEHYASSG 187
           +S HT TS     H  H++HY  SG
Sbjct: 17  SSSHTTTSSNTQRHQQHQQHYGGSG 41


>U10184-1|AAA19003.1|  805|Drosophila melanogaster drosE2F1 protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 113 ASKHTETSYEVVAHPHHEEHYASSG 187
           +S HT TS     H  H++HY  SG
Sbjct: 17  SSSHTTTSSNTQRHQQHQQHYGGSG 41


>BT016096-1|AAV36981.1|  805|Drosophila melanogaster LD35741p
           protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 113 ASKHTETSYEVVAHPHHEEHYASSG 187
           +S HT TS     H  H++HY  SG
Sbjct: 17  SSSHTTTSSNTQRHQQHQQHYGGSG 41


>AE014297-3023|AAN13879.1|  805|Drosophila melanogaster CG6376-PC,
           isoform C protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 113 ASKHTETSYEVVAHPHHEEHYASSG 187
           +S HT TS     H  H++HY  SG
Sbjct: 17  SSSHTTTSSNTQRHQQHQQHYGGSG 41


>AE014297-3022|AAN13878.1|  805|Drosophila melanogaster CG6376-PB,
           isoform B protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 113 ASKHTETSYEVVAHPHHEEHYASSG 187
           +S HT TS     H  H++HY  SG
Sbjct: 17  SSSHTTTSSNTQRHQQHQQHYGGSG 41


>AE014297-3021|AAF55904.1|  805|Drosophila melanogaster CG6376-PA,
           isoform A protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 113 ASKHTETSYEVVAHPHHEEHYASSG 187
           +S HT TS     H  H++HY  SG
Sbjct: 17  SSSHTTTSSNTQRHQQHQQHYGGSG 41


>AB011813-2|BAA32746.1|  805|Drosophila melanogaster E2F protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 113 ASKHTETSYEVVAHPHHEEHYASSG 187
           +S HT TS     H  H++HY  SG
Sbjct: 17  SSSHTTTSSNTQRHQQHQQHYGGSG 41


>AE014134-2062|AAF53094.1|  282|Drosophila melanogaster CG14925-PA
           protein.
          Length = 282

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 86  GIIALKKLLASKHT-ETSYEVVAHPHHEEH 172
           GIIALKKL +  H+ ETS++V A  H+  +
Sbjct: 211 GIIALKKLFSHDHSEETSFQVHAGEHNRRN 240


>AY122110-1|AAM52622.1|  590|Drosophila melanogaster GH12419p
           protein.
          Length = 590

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
 Frame = +1

Query: 22  GYHRLRSRQSRRTCQDLTPGRRYHCSEEAAGQQAHRDQLRSGRP----SSPRGALRKQRP 189
           G H L     R     +T   +   S    GQQ H+    + +P      P G LR    
Sbjct: 51  GQHPLSDSYKRYKQPGITTASQEGLSSAGQGQQGHQSHHPTHQPHPTAQPPHGILRSGNS 110

Query: 190 RLGQVY 207
           RL QVY
Sbjct: 111 RLHQVY 116


>AE014298-3087|AAZ52506.1|  590|Drosophila melanogaster CG11566-PA
           protein.
          Length = 590

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
 Frame = +1

Query: 22  GYHRLRSRQSRRTCQDLTPGRRYHCSEEAAGQQAHRDQLRSGRP----SSPRGALRKQRP 189
           G H L     R     +T   +   S    GQQ H+    + +P      P G LR    
Sbjct: 51  GQHPLSDSYKRYKQPGITTASQEGLSSAGQGQQGHQSHHPTHQPHPTAQPPHGILRSGNS 110

Query: 190 RLGQVY 207
           RL QVY
Sbjct: 111 RLHQVY 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,188,996
Number of Sequences: 53049
Number of extensions: 432007
Number of successful extensions: 1937
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)