Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    22   3.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.7  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 29  FFLPMLIALRGYFSFALTYR*VHGARTGSVANTD 130
           F + +LIA  G  +  L +    G R+GS A +D
Sbjct: 5   FLIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGSD 38


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 373 IETLVWGVGSKANHCPNL*NKVHTP 447
           +ETLV  + ++  H  N  NK+  P
Sbjct: 505 LETLVHQLNTEVLHLSNAINKMKAP 529


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 255 LYNVTCWYVQCDLFVCTINRINVFIVMVC*MEGLCEVLL 139
           LY     Y+  D  V   N  ++F+ ++C +    E+L+
Sbjct: 257 LYFCIFGYIYDDEMVVPQNFHDIFLPLLCILTNTLEILI 295


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 255 LYNVTCWYVQCDLFVCTINRINVFIVMVC*MEGLCEVLL 139
           LY     Y+  D  V   N  ++F+ ++C +    E+L+
Sbjct: 82  LYFCIFGYIYDDEMVVPQNFHDIFLPLLCILTNTLEILI 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,954
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)