Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   2.7  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   3.6  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    23   6.2  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   8.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 163 HLTNHYDEDIYPVYSTYKQ 219
           H T HY +D+ P+  T +Q
Sbjct: 637 HFTFHYSKDVKPLLQTIQQ 655


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 255 LYNVTCWYVQCDLFVC 208
           LY  T W+VQC++ +C
Sbjct: 276 LYFPTDWHVQCNVPIC 291


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 175 HYDEDIYPVYSTY 213
           H+D DIYP  +TY
Sbjct: 415 HHDPDIYPEPATY 427


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 246 HCIKLNLSITKYYRY*NHSD*YILSYLSKNLHNSTRRQCR 365
           HC   ++ +  +    N+SD + L  LS    NST    R
Sbjct: 297 HCTNTSIIVDGFTNPSNNSDRFCLGQLSNVNRNSTIENTR 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,660
Number of Sequences: 2352
Number of extensions: 10108
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)