Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307D04f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g12380.1 68418.m01456 annexin, putative similar to annexin [F... 80 1e-15
At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to ca... 77 7e-15
At1g35720.1 68414.m04440 annexin 1 (ANN1) identical to annexin (... 76 1e-14
At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to ca... 75 2e-14
At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to calcium-b... 74 5e-14
At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin (... 73 2e-13
At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to an... 72 3e-13
At2g38750.1 68415.m04758 annexin 4 (ANN4) nearly identical to an... 32 0.20
At5g64840.1 68418.m08157 ABC transporter family protein 28 4.4
At3g04750.1 68416.m00511 pentatricopeptide (PPR) repeat-containi... 28 4.4
At1g34320.1 68414.m04259 expressed protein contains Pfam domain ... 28 4.4
At5g09930.1 68418.m01148 ABC transporter family protein 27 5.8
>At5g12380.1 68418.m01456 annexin, putative similar to annexin
[Fragaria x ananassa] GI:6010777, annexin p33 [Zea mays]
GI:6272285; contains Pfam profile PF00191: Annexin
Length = 316
Score = 79.8 bits (188), Expect = 1e-15
Identities = 48/138 (34%), Positives = 72/138 (52%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 282
++ A +G+GT+E AII +L R + QR I + ++ Y +DLI +LKSEL+GN E I
Sbjct: 19 IKAACQGWGTNENAIISILGHRNLFQRKLIRQAYQEIYHEDLIHQLKSELSGNFERAICL 78
Query: 283 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 462
+ P A + A+ D + ++EI C S + Y LY SLE DL
Sbjct: 79 WVLDPPERDALLANLALQKPIPDYKVLVEIACMRSPEDMLAARRAYRCLYKHSLEEDLAS 138
Query: 463 DTSGHFKRLCVSLCMAXR 516
T G +RL V++ A +
Sbjct: 139 RTIGDIRRLLVAMVSAYK 156
Score = 59.3 bits (137), Expect = 2e-09
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYG----KDLISELKSELTGNLEN 270
L + G D + I VL R +Q I +K YG KDL++ +E L
Sbjct: 174 LHDEILGKAVDHEETIRVLSTRSSMQLSAIFNRYKDIYGTSITKDLLNHPTNEYLSALRA 233
Query: 271 VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLES 450
I + P +YAK L ++++ +GTDE+A+ ++ T + + I+ Y + SL+
Sbjct: 234 AIRCIKNPT-RYYAKVLRNSINTVGTDEDALNRVIVTRAEKDLTNITGLYFKRNNVSLDQ 292
Query: 451 DLKGDTSGHFKRLCVSL 501
+ +TSG +K ++L
Sbjct: 293 AIAKETSGDYKAFLLAL 309
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 277 VALMTPLPHFY----AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 444
+A + PHF A+ + A G GT+E AII IL + + + I Y+++Y + L
Sbjct: 1 MATIVSPPHFSPVEDAENIKAACQGWGTNENAIISILGHRNLFQRKLIRQAYQEIYHEDL 60
Query: 445 ESDLKGDTSGHFKR-LCV 495
LK + SG+F+R +C+
Sbjct: 61 IHQLKSELSGNFERAICL 78
>At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to
calcium-binding protein annexin 7 [Arabidopsis thaliana]
GI:12667522
Length = 316
Score = 77.0 bits (181), Expect = 7e-15
Identities = 45/138 (32%), Positives = 65/138 (47%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 282
L KA KG+GT+E+ II +L R QR I + NY KDL+ EL EL+G+ E ++
Sbjct: 20 LYKAFKGWGTNERMIISILAHRNATQRSFIRAVYAANYNKDLLKELDRELSGDFERAVML 79
Query: 283 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 462
A ++ + ++EI CT S + Y+ Y SLE D+
Sbjct: 80 WTFEPAERDAYLAKESTKMFTKNNWVLVEIACTRSALELFNAKQAYQARYKTSLEEDVAY 139
Query: 463 DTSGHFKRLCVSLCMAXR 516
TSG ++L V L R
Sbjct: 140 HTSGDIRKLLVPLVSTFR 157
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/70 (37%), Positives = 34/70 (48%)
Frame = +1
Query: 277 VALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 456
V PLP A++L+ A G GT+E II IL + I A Y Y K L +L
Sbjct: 6 VPATVPLPEEDAEQLYKAFKGWGTNERMIISILAHRNATQRSFIRAVYAANYNKDLLKEL 65
Query: 457 KGDTSGHFKR 486
+ SG F+R
Sbjct: 66 DRELSGDFER 75
>At1g35720.1 68414.m04440 annexin 1 (ANN1) identical to annexin
(AnnAt1) [Arabidopsis thaliana] GI:4959106
Length = 317
Score = 76.2 bits (179), Expect = 1e-14
Identities = 43/138 (31%), Positives = 69/138 (50%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 282
LR A +G+GT+E II +L R QR I + + YG+DL+ L EL+ + E I+
Sbjct: 20 LRTAFEGWGTNEDLIISILAHRSAEQRKVIRQAYHETYGEDLLKTLDKELSNDFERAILL 79
Query: 283 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 462
A ++A + + ++E+ CT ++ + Y Y KSLE D+
Sbjct: 80 WTLEPGERDALLANEATKRWTSSNQVLMEVACTRTSTQLLHARQAYHARYKKSLEEDVAH 139
Query: 463 DTSGHFKRLCVSLCMAXR 516
T+G F++L VSL + R
Sbjct: 140 HTTGDFRKLLVSLVTSYR 157
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +1
Query: 292 PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 471
P P A++L A G GT+E+ II IL S + I Y + YG+ L L + S
Sbjct: 11 PAPSDDAEQLRTAFEGWGTNEDLIISILAHRSAEQRKVIRQAYHETYGEDLLKTLDKELS 70
Query: 472 GHFKR 486
F+R
Sbjct: 71 NDFER 75
>At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to
calcium-binding protein annexin 6 [Arabidopsis thaliana]
GI:12667518
Length = 318
Score = 75.4 bits (177), Expect = 2e-14
Identities = 45/138 (32%), Positives = 65/138 (47%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 282
L KA KG+GT+E II +L R QR I + NY KDL+ EL EL+G+ E V++
Sbjct: 20 LHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVML 79
Query: 283 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 462
A +++ + ++EI CT + Y Y SLE D+
Sbjct: 80 WTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAY 139
Query: 463 DTSGHFKRLCVSLCMAXR 516
TSG+ ++L V L R
Sbjct: 140 HTSGNIRKLLVPLVSTFR 157
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/66 (39%), Positives = 35/66 (53%)
Frame = +1
Query: 292 PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 471
PLP +++LH A G GT+E II IL + I A Y Y K L +L G+ S
Sbjct: 11 PLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELS 70
Query: 472 GHFKRL 489
G F+R+
Sbjct: 71 GDFERV 76
>At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to
calcium-binding protein annexin 5 [Arabidopsis thaliana]
GI:12667520
Length = 316
Score = 74.1 bits (174), Expect = 5e-14
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Frame = +1
Query: 100 TLRKAM-KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVI 276
TL+ A+ + +D++ +I + R + + T+++ YGK+L ++ E GN E+V+
Sbjct: 174 TLKSAVARKHKSDDQTLIQIFTDRSRTHLVAVRSTYRSMYGKELGKAIRDETRGNFEHVL 233
Query: 277 VALMTPLPH---FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 447
+ ++ + ++AK L ++ G+GTD+ A+I I+ T + ++ I Y + Y K+L
Sbjct: 234 LTILQCAENSCFYFAKALRKSMKGLGTDDTALIRIVVTRAEVDMQFIITEYRKRYKKTLY 293
Query: 448 SDLKGDTSGHFKRLCVSL 501
+ + DT+ H++ +SL
Sbjct: 294 NAVHSDTTSHYRTFLLSL 311
Score = 60.1 bits (139), Expect = 9e-10
Identities = 36/145 (24%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 282
L+++++G TD KAI +++C R Q +I + + +G L +++SE +GN + V++A
Sbjct: 92 LKRSLRGAVTDHKAIAEIICTRSGSQLRQIKQVYSNTFGVKLEEDIESEASGNHKRVLLA 151
Query: 283 LMTPL----PHF-------YAKELHDAVS-GIGTDEEAIIEILCTLSNYGIRTISAFYEQ 426
+ P A+ L AV+ +D++ +I+I S + + + Y
Sbjct: 152 YLNTTRYEGPEIDNASVENDARTLKSAVARKHKSDDQTLIQIFTDRSRTHLVAVRSTYRS 211
Query: 427 LYGKSLESDLKGDTSGHFKRLCVSL 501
+YGK L ++ +T G+F+ + +++
Sbjct: 212 MYGKELGKAIRDETRGNFEHVLLTI 236
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 282
LRK+MKG GTD+ A+I ++ R V I ++ Y K L + + S+ T + +++
Sbjct: 251 LRKSMKGLGTDDTALIRIVVTRAEVDMQFIITEYRKRYKKTLYNAVHSDTTSHYRTFLLS 310
Query: 283 LMTP 294
L+ P
Sbjct: 311 LLGP 314
>At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin
(AnnAt2) [Arabidopsis thaliana] GI:4959108
Length = 317
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/138 (28%), Positives = 63/138 (45%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 282
L KA G+GT+EK II +L R QR I + Y +DL+ L EL+ + E ++
Sbjct: 20 LHKAFSGWGTNEKLIISILAHRNAAQRSLIRSVYAATYNEDLLKALDKELSSDFERAVML 79
Query: 283 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 462
P A ++ + ++EI CT + + Y+ Y KS+E D+
Sbjct: 80 WTLDPPERDAYLAKESTKMFTKNNWVLVEIACTRPALELIKVKQAYQARYKKSIEEDVAQ 139
Query: 463 DTSGHFKRLCVSLCMAXR 516
TSG ++L + L R
Sbjct: 140 HTSGDLRKLLLPLVSTFR 157
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Frame = +1
Query: 106 RKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVAL 285
+++ K F + ++++ C R ++ +++ + ++ Y K + ++ +G+L +++ L
Sbjct: 93 KESTKMFTKNNWVLVEIACTRPALELIKVKQAYQARYKKSIEEDVAQHTSGDLRKLLLPL 152
Query: 286 MTP-----------LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLY 432
++ L AK LH+ VS ++ I IL T S + Y Y
Sbjct: 153 VSTFRYEGDDVNMMLARSEAKILHEKVSEKSYSDDDFIRILTTRSKAQLGATLNHYNNEY 212
Query: 433 GKSLESDLK--GDTSGHFKRL-CVSLCM 507
G ++ +LK D + + K L V C+
Sbjct: 213 GNAINKNLKEESDDNDYMKLLRAVITCL 240
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +1
Query: 292 PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 471
PLP A++LH A SG GT+E+ II IL + I + Y Y + L L + S
Sbjct: 11 PLPEDDAEQLHKAFSGWGTNEKLIISILAHRNAAQRSLIRSVYAATYNEDLLKALDKELS 70
Query: 472 GHFKR 486
F+R
Sbjct: 71 SDFER 75
>At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to
annexin (AnnAt3) [Arabidopsis thaliana] GI:6503082;
contains Pfam profile PF00191: Annexin
Length = 321
Score = 71.7 bits (168), Expect = 3e-13
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Frame = +1
Query: 100 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 279
TL++A++G+GTDEKAII VL +R QR +I E+F+ YGKDLI L SEL+G+ +V
Sbjct: 19 TLKQAIRGWGTDEKAIIRVLGQRDQSQRRKIRESFREIYGKDLIDVLSSELSGDFMKAVV 78
Query: 280 ALMTPLPHFYAKELHDAVSGIGTDE-----EAIIEILCTLSNYGIRTISAFYEQLYGKSL 444
+ A+ ++ ++ + + I+EI CT S + + Y L+ SL
Sbjct: 79 SWTYDPAERDARLVNKILNKEKKKKSLENLKVIVEISCTTSPNHLIAVRKAYCSLFDSSL 138
Query: 445 ESDLKGDTSGHFKRLCVSLCMAXR 516
E + +L V+L R
Sbjct: 139 EEHIASSLPFPLAKLLVTLASTFR 162
Score = 65.3 bits (152), Expect = 2e-11
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELK-----SELTGNLE 267
LR+A++ D ++ +L R I Q E +K NYG + ++ ++L L+
Sbjct: 180 LREAIEKKQLDHDHVLYILGTRSIYQLRETFVAYKKNYGVTIDKDVDGCPGDADLRSLLK 239
Query: 268 NVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 447
I + TP HF AK + D++ G GTDE+++ + T + + + Y +Y S++
Sbjct: 240 VAIFCIDTPEKHF-AKVVRDSIEGFGTDEDSLTRAIVTRAEIDLMKVRGEYFNMYNTSMD 298
Query: 448 SDLKGDTSGHFKRLCVSL 501
+ + GD SG +K ++L
Sbjct: 299 NAITGDISGDYKDFIITL 316
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +1
Query: 292 PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 471
P P ++ L A+ G GTDE+AII +L R I + ++YGK L L + S
Sbjct: 11 PSPAQDSETLKQAIRGWGTDEKAIIRVLGQRDQSQRRKIRESFREIYGKDLIDVLSSELS 70
Query: 472 GHFKRLCVS 498
G F + VS
Sbjct: 71 GDFMKAVVS 79
Score = 34.3 bits (75), Expect = 0.050
Identities = 12/62 (19%), Positives = 35/62 (56%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 282
+R +++GFGTDE ++ + R + +++ + Y + + + +++G+ ++ I+
Sbjct: 256 VRDSIEGFGTDEDSLTRAIVTRAEIDLMKVRGEYFNMYNTSMDNAITGDISGDYKDFIIT 315
Query: 283 LM 288
L+
Sbjct: 316 LL 317
>At2g38750.1 68415.m04758 annexin 4 (ANN4) nearly identical to
annexin (AnnAt4) [Arabidopsis thaliana] GI:6503084;
contains Pfam profile PF00191: Annexin
Length = 319
Score = 32.3 bits (70), Expect = 0.20
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 14/146 (9%)
Frame = +1
Query: 121 GFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKD-----------LISELKSELTGNLE 267
G G DE A+I L + R + K+ + +D + LK E +
Sbjct: 19 GMGVDENALISTLGKSQKEHRKLFRKASKSFFVEDEERAFEKCHDHFVRHLKLEFSRFNT 78
Query: 268 NVIVALMTPLPHFYAKELHDAVSGIGTDEEA---IIEILCTLSNYGIRTISAFYEQLYGK 438
V++ M P + ++ + EEA I+E+ CT S + Y L+ +
Sbjct: 79 AVVMWAMHP----WERDARLVKKALKKGEEAYNLIVEVSCTRSAEDLLGARKAYHSLFDQ 134
Query: 439 SLESDLKGDTSGHFKRLCVSLCMAXR 516
S+E D+ G ++L V L A R
Sbjct: 135 SMEEDIASHVHGPQRKLLVGLVSAYR 160
>At5g64840.1 68418.m08157 ABC transporter family protein
Length = 692
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 136 EKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISE 237
++A +D LC + + + ++ TF+ NY + +IS+
Sbjct: 315 DRAFLDQLCTKIVETEMGVSRTFEGNYSQYVISK 348
>At3g04750.1 68416.m00511 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 661
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 103 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTG 258
+R +KG A+ID+ C+ GI++R + FKT KD ++ S +TG
Sbjct: 395 IRLQLKGDAFLSSALIDMYCKCGIIERAFM--VFKTATEKD-VALWTSMITG 443
>At1g34320.1 68414.m04259 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668)
Length = 657
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 163 RRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGI 342
+RG+ L I T + K + + K L + ++ + + HF E+H+A G
Sbjct: 305 QRGVGDTLAILRTELKSQKKHVRNLKKKSLWSRILEEVMEKLVDVVHFLHLEIHEAFGGA 364
Query: 343 GTDEEA 360
D+ A
Sbjct: 365 DPDKPA 370
>At5g09930.1 68418.m01148 ABC transporter family protein
Length = 678
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 136 EKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSEL 252
++A +D LC + + + ++ TF NY + +IS K+EL
Sbjct: 301 DRAFLDQLCTKIVETEMGVSRTFDGNYSQYVIS--KAEL 337
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,971,565
Number of Sequences: 28952
Number of extensions: 189450
Number of successful extensions: 632
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -