Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307D03f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 194 1e-48
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 179 4e-44
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 161 1e-38
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 142 6e-33
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 139 4e-32
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 138 5e-32
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 134 2e-30
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 133 3e-30
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 132 6e-30
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 113 2e-24
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 113 3e-24
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 111 1e-23
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 110 2e-23
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 105 6e-22
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 102 4e-21
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 101 1e-20
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 100 2e-20
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 88 1e-16
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 85 7e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 82 7e-15
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 79 5e-14
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 75 1e-12
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 57 2e-07
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 57 2e-07
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 41 0.020
UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family prote... 35 0.98
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_Q2U174 Cluster: Predicted protein; n=1; Aspergillus ory... 33 4.0
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 33 5.2
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 5.2
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 33 5.2
UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n... 32 6.9
UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative, Ty3-... 32 6.9
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 9.2
UniRef50_A7AN85 Cluster: Membrane protein, putative; n=1; Babesi... 32 9.2
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 194 bits (472), Expect = 1e-48
Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Frame = -3
Query: 438 EFGTRGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 259
+F GKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI
Sbjct: 3 KFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKI 62
Query: 258 HKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERY 85
KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEERY
Sbjct: 63 AKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERY 122
Query: 84 KSGKNKWFFQKLRF 43
K+GKNKWFFQKLRF
Sbjct: 123 KTGKNKWFFQKLRF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 179 bits (435), Expect = 4e-44
Identities = 82/129 (63%), Positives = 102/129 (79%), Gaps = 2/129 (1%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
GKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK KI KR+K
Sbjct: 8 GKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNK 67
Query: 243 IKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 70
+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K + +FEERYK+GKN
Sbjct: 68 LKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKN 127
Query: 69 KWFFQKLRF 43
KWFF KLRF
Sbjct: 128 KWFFTKLRF 136
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 161 bits (390), Expect = 1e-38
Identities = 72/135 (53%), Positives = 100/135 (74%), Gaps = 2/135 (1%)
Frame = -3
Query: 441 AEFGTRGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNK 262
A+F GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G K
Sbjct: 2 AKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKK 61
Query: 261 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEER 88
+ KR+KIKPF+KVVNYNHL+PTRYT+D K S + + P++R++ + + FEER
Sbjct: 62 VAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEER 121
Query: 87 YKSGKNKWFFQKLRF 43
+++GKN+WFF KLRF
Sbjct: 122 HQAGKNQWFFSKLRF 136
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 142 bits (343), Expect = 6e-33
Identities = 63/129 (48%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK + KRS+
Sbjct: 58 GRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMVEKRSR 117
Query: 243 IKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 70
IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+ + + E+RY SGKN
Sbjct: 118 IKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRYTSGKN 177
Query: 69 KWFFQKLRF 43
+WFF LRF
Sbjct: 178 RWFFTPLRF 186
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 139 bits (336), Expect = 4e-32
Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 4/130 (3%)
Frame = -3
Query: 420 KVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 241
+V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPRKV MGK K +R+++
Sbjct: 9 RVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKKKFERRTRV 68
Query: 240 KPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKRKKLRFNTRVRFEERYKSGK 73
K F K +NYNHLM TRY+V F +K F K+ + RK+ + + ER+ + K
Sbjct: 69 KAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQTVMRERFLAAK 128
Query: 72 NKWFFQKLRF 43
N+WFF KLRF
Sbjct: 129 NRWFFTKLRF 138
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 138 bits (335), Expect = 5e-32
Identities = 58/127 (45%), Positives = 90/127 (70%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
GKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K I +RS+
Sbjct: 7 GKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTIQRRSR 66
Query: 243 IKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 64
+ F++VVN+ H +PTRY +D S E ++ D +K+ + + R F+ RY +G N+W
Sbjct: 67 VGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNAGSNRW 126
Query: 63 FFQKLRF 43
FFQ+LRF
Sbjct: 127 FFQRLRF 133
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 134 bits (323), Expect = 2e-30
Identities = 66/142 (46%), Positives = 94/142 (66%), Gaps = 9/142 (6%)
Frame = -3
Query: 441 AEFGTRGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPRKVHKRMGK 268
++F G++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M +
Sbjct: 3 SKFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSR 62
Query: 267 NKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDPAKRKKLRFNT 109
I KR+ I+ FVKVVNYNH+MPTRY + E F+ + AKR R
Sbjct: 63 KTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAV 122
Query: 108 RVRFEERYKSGKNKWFFQKLRF 43
+ FE ++K+GK+KWFF KLRF
Sbjct: 123 KKIFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 133 bits (321), Expect = 3e-30
Identities = 60/127 (47%), Positives = 87/127 (68%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
GKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K I +RS+
Sbjct: 8 GKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQTIARRSQ 67
Query: 243 IKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 64
+ F++VVN+ H +PTRY VD S E ++ D +KR + + R F+ RY +G + W
Sbjct: 68 VGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMW 127
Query: 63 FFQKLRF 43
FFQ+LRF
Sbjct: 128 FFQRLRF 134
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 132 bits (318), Expect = 6e-30
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 3/128 (2%)
Frame = -3
Query: 417 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 241
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP+KV KRMG KI KRSK+
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKV 122
Query: 240 KPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 67
KPFVKV++YNHLMPTRY ++ K + K+P++R+ + + FEE+Y SGKNK
Sbjct: 123 KPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKNK 182
Query: 66 WFFQKLRF 43
WFF LRF
Sbjct: 183 WFFTPLRF 190
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 113 bits (273), Expect = 2e-24
Identities = 49/66 (74%), Positives = 59/66 (89%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K ++HKRSK
Sbjct: 8 GKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKTRLHKRSK 67
Query: 243 IKPFVK 226
IKPF+K
Sbjct: 68 IKPFIK 73
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 113 bits (271), Expect = 3e-24
Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 18/145 (12%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
G+++++L+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG+ +I KR+
Sbjct: 907 GRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTT 966
Query: 243 IKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEER 88
+K F+K +N NH+MPTRY ++ S E+ +LK+ KRK+LR N R E+
Sbjct: 967 LKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRKNLRKYLAEK 1026
Query: 87 Y----------KSGKNKWFFQKLRF 43
Y K ++++ F KLRF
Sbjct: 1027 YRTLPAGSLADKKAQSRFLFSKLRF 1051
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 111 bits (266), Expect = 1e-23
Identities = 60/144 (41%), Positives = 94/144 (65%), Gaps = 11/144 (7%)
Frame = -3
Query: 441 AEFGTRGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNK 262
A+ +G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+ K K
Sbjct: 19 AKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSKEK 78
Query: 261 IHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEK-FSAKDLKDPAKRKK------LRFNTR 106
+ K+S IKPF+K +N NH+MPTRY V DF + D+++ +K+ L FN +
Sbjct: 79 LKKKSTIKPFLKSINMNHVMPTRYVVSDFDIKPLLQGIDMQEADGKKQALRALHLAFNDK 138
Query: 105 -VRFE-ERYKSGKNKWFFQK-LRF 43
+ + E+ K+ K+ F +K LRF
Sbjct: 139 LINIQSEKGKAPKDLIFLRKPLRF 162
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 110 bits (265), Expect = 2e-23
Identities = 44/77 (57%), Positives = 63/77 (81%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRMG KI KR+
Sbjct: 23 GRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMGSKKIQKRTS 82
Query: 243 IKPFVKVVNYNHLMPTR 193
+KPF+K VN NH+MPTR
Sbjct: 83 VKPFIKYVNLNHIMPTR 99
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 105 bits (252), Expect = 6e-22
Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M + K+++
Sbjct: 7 GRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLVKKTQ 66
Query: 243 IKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDPAKRKKLRFNTRVRFEERY 85
+K FVK VN+NH+M TR+ V DF F+K S + LKD +K L ++Y
Sbjct: 67 VKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVLRQKY 125
Query: 84 KSGKNKWFFQKLRF 43
+ K WFF+ L+F
Sbjct: 126 LNNKMAWFFKPLQF 139
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 102 bits (245), Expect = 4e-21
Identities = 43/78 (55%), Positives = 61/78 (78%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
GKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI KRSK
Sbjct: 100 GKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIKRSK 159
Query: 243 IKPFVKVVNYNHLMPTRY 190
+K FVK +N NH++PTRY
Sbjct: 160 VKAFVKYINVNHILPTRY 177
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 101 bits (242), Expect = 1e-20
Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 7/134 (5%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
G+VV++LSGR+AG+KA+V +GT D+ YG V G++R P K+ ++M R+
Sbjct: 8 GRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAKVQEMRTS 67
Query: 243 IKPFVKVVNYNHLMPTRYTVDFSFEKFS-AKDLK----DPAKRKKLRFNTRV--RFEERY 85
+K F KV+N NH+MPT+YTV + E+F+ K +K + K + + +F E Y
Sbjct: 68 VKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGKVYPISQKKAISSQFAEEY 125
Query: 84 KSGKNKWFFQKLRF 43
+ GK W F KLRF
Sbjct: 126 RKGKESWLFTKLRF 139
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 100 bits (240), Expect = 2e-20
Identities = 50/121 (41%), Positives = 77/121 (63%), Gaps = 3/121 (2%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
G+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P KV K+M KI KR K
Sbjct: 8 GRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSKKIEKRLK 67
Query: 243 IKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRKKLRFNTRVRFEERYKSGK 73
+K FVK VN NHLMPTRY V + + S + +++ + RK+ R + + EE + + +
Sbjct: 68 LKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVLEECFSNPE 127
Query: 72 N 70
N
Sbjct: 128 N 128
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 88.2 bits (209), Expect = 1e-16
Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 18/127 (14%)
Frame = -3
Query: 369 VKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 190
+K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRY 195
Query: 189 TVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY----------KSGKNKW 64
++ S E+ +LK+ KRK LR N R E+Y K ++++
Sbjct: 196 RLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRF 255
Query: 63 FFQKLRF 43
F KLRF
Sbjct: 256 LFSKLRF 262
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 85.4 bits (202), Expect = 7e-16
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = -3
Query: 387 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNH 208
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV V NYNH
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNH 63
Query: 207 LMPTRYTVDFSFEK 166
L RY+VD +K
Sbjct: 64 LKSIRYSVDIPLDK 77
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 82.2 bits (194), Expect = 7e-15
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = -3
Query: 291 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRF 115
+V K+M + K KRSK K F+K +NY+HLMPTRYT+D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 114 NTRVRFEERYKSGKNKWFFQKLRF 43
+ EER+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 76.6 bits (180), Expect = 3e-13
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
GKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H+ ++
Sbjct: 26 GKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRCAR 80
Query: 243 IKPFVKVVNYNHLMPTRYTVDFSFEKFSAK-DLKDPAKRKKLR 118
PF ++ R +V F + + K D K AKR K +
Sbjct: 81 TAPF----GCTEILTAR-SVAFENAQVTKKMDEKKQAKRSKCK 118
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 79.4 bits (187), Expect = 5e-14
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 244
G V +VL GR+AG+KA++V+ +A VAGI PR++ M + R +
Sbjct: 9 GLVCIVLQGRHAGKKAVIVEALPHNERGS---YAIVAGIAALPRRITNSMSDEEAVCRGR 65
Query: 243 IKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 67
++ FVK +N NHLMPT ++ +++ F S + + D KR+++ F+ R ++
Sbjct: 66 VRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRILEHRDT 125
Query: 66 WFFQKL 49
WFF KL
Sbjct: 126 WFFTKL 131
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 74.9 bits (176), Expect = 1e-12
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYD-EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 247
G+VV+VLSG+YAG+KA V+KN + E +K + GI + +K+ M K KI
Sbjct: 8 GRVVIVLSGKYAGKKAFVLKNSNIESLCEKKI---IILGIKKEMKKIKYNMSKRKIISNL 64
Query: 246 KIKPFVKVVNYNHLMPTRYTVD-----------FSFEKFSAKDLKDPAKRKKLRF-NTRV 103
+ K F+K +N H+ PTRY ++ + K K + ++ K+ +
Sbjct: 65 RFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNEHTNEKAKVNLVSINN 124
Query: 102 RFEERYKSGKNKWFFQKLRF 43
++R GKN WFF+K++F
Sbjct: 125 YLQDRLLRGKNLWFFKKMKF 144
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = -3
Query: 273 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 94
G+ + +R + +P V + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 93 ERYKSGKNKWFFQKLRF 43
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 57.2 bits (132), Expect = 2e-07
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = -3
Query: 417 VVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIK 238
+V+V SG+ AG+KA+V+K DE + A + R P++ K + +K
Sbjct: 8 IVVVTSGKNAGKKAVVIKQIDER-------YVLTACVVRIPKEPEDHQPKWIKRRNAKFY 60
Query: 237 PFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERYKSGKNKWF 61
+K N HL+ TRY D ++D A+ KK+ N T+ + +K K K+
Sbjct: 61 IILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENKAKFL 120
Query: 60 FQKLRF 43
F L F
Sbjct: 121 FSSLSF 126
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 40.7 bits (91), Expect = 0.020
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = -3
Query: 423 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRM--GKNKIH 256
GK++ L+G+YAG+ +VK+Y + + K + H V + ++ K K N
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTNTKFTNKNSKSFISKMNDQP 67
Query: 255 KRSKIKPFVKVVNYNHLMPTRYTVDFSF 172
K K K +K++N NH++ ++ +++ ++
Sbjct: 68 KIFKYKIKLKILNANHIIVSKKSINVNW 95
>UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family protein;
n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
Repeat family protein - Tetrahymena thermophila SB210
Length = 4758
Score = 35.1 bits (77), Expect = 0.98
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +1
Query: 127 LTFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHFPGVPV 306
L F F VF F + +C + VI+ NLD+ LYL ++ + L +
Sbjct: 107 LLFDSCFYVFDTNFQQIFNDCSQLFDDVIVQANLDKSLYLLSVIASFQNIQLSQVVDISF 166
Query: 307 DTSDEGMPVWLVGG 348
TSD +++VGG
Sbjct: 167 VTSDPNDNIYVVGG 180
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 33.9 bits (74), Expect = 2.3
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Frame = -3
Query: 441 AEFGTRGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDR-YPRKVHKRMGKN 265
A V +V++ RY G+ + E D+P GHAF AG+D R+V K G+
Sbjct: 217 ARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVDAGIMRRVGKFTGRM 276
Query: 264 KIHKRS-----------KIKPFVKVVNYNH 208
R+ K+ P + +VNY +
Sbjct: 277 TYGARTTTVQESFADALKLAPDIPIVNYEY 306
>UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 189
Score = 33.1 bits (72), Expect = 4.0
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -3
Query: 321 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKD 142
F+ I ++ +K KR ++ HKR + + N+N L T VD+ EK + +
Sbjct: 3 FLPEIQQFQQKQAKRKSQSSNHKRF----LIIIYNFNRLYLTEIEVDYKNEKITCSIFDE 58
Query: 141 PAKRKK 124
A RK+
Sbjct: 59 MASRKQ 64
>UniRef50_Q2U174 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 209
Score = 33.1 bits (72), Expect = 4.0
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +2
Query: 308 IPATKACP--YGLSEVPSS*FLTTIALRPAYRPLRTSTTLPLVPNS 439
+PA+ +C + LS++PS T ++ P+Y+P+ TSTT+ +P S
Sbjct: 4 LPASSSCSSYFLLSQIPSH--TTPLSHCPSYQPITTSTTMANLPTS 47
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 32.7 bits (71), Expect = 5.2
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -3
Query: 429 TRGKVVLVLSGRYAGRKAIVVKNYDEG 349
T G V+++L+GR+AG++ + +K D G
Sbjct: 92 TPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 5.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 201 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 115
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 210 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 64
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCEB7 UniRef100 entry -
Gallus gallus
Length = 75
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -3
Query: 276 MGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRF 97
+GK K K+ K K + + HL+ ++ T + +K + LK K+K +F+ + +
Sbjct: 1 VGKKKKEKKKKKKENYRNILEAHLLKSKQTNKQTNKKHPSFTLKKKKKKKAFKFSGKFKS 60
Query: 96 EER 88
EER
Sbjct: 61 EER 63
>UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 192
Score = 32.3 bits (70), Expect = 6.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 382 QGYRSQELRRRYLRQAIRACLRRWYRQVPPESAQEDGKE*NPQEVQDKAFRQGCK 218
Q Y ++ R+RY Q RA R+W R+ E +E + Q + +R+ K
Sbjct: 49 QRYPPRQARQRYCSQGCRAAARKWSRRKAQERYRETAAGQQKRNGQSRRYRERVK 103
>UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=7; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 1333
Score = 32.3 bits (70), Expect = 6.9
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 101 RTRVLKRSFLRLAGSFRSFALNFSKL 178
RT L RSFL LAG +R F NFSK+
Sbjct: 760 RTVTLVRSFLGLAGYYRRFIENFSKI 785
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 180 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 79
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 270 KNKIHKRSKIKPFV--KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 121
K + +K + F+ K++ YN P YT +F +EK ++ KRK++
Sbjct: 867 KCQFYKNKEEPQFICNKILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_A7AN85 Cluster: Membrane protein, putative; n=1; Babesia
bovis|Rep: Membrane protein, putative - Babesia bovis
Length = 543
Score = 31.9 bits (69), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 262 FILSHPLVHFPGVPVDTSDEGMPVWLV 342
F L H LV +P + DT DE M W V
Sbjct: 285 FALEHNLVQYPTINADTQDEAMAQWSV 311
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,279,500
Number of Sequences: 1657284
Number of extensions: 10406056
Number of successful extensions: 31271
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 30261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31242
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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