Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   0.94 
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    23   1.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.0  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   8.7  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = +2

Query: 332 KQNKLDFLYRLTYFVIDRSILSEKSNKFNSKREV 433
           KQN   F+Y   +  +   +L+ +  K+ ++R++
Sbjct: 96  KQNTKSFIYHFLHSWLGTGLLTSRGPKWQNRRKI 129


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 377 IDRSILSEKSNKFN--SKREVYHCSRCLAWLGLKIKDTVRLYNS 502
           +  SI++E        SK+  Y+  + L +L   IK+T+RLY S
Sbjct: 18  VQESIVAEMREVLGDLSKKPSYNDLQNLKYLERCIKETLRLYPS 61


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 328 NYICLISMAVSMTVSMTEPFCHV 260
           NY CL S + S+T   T  F +V
Sbjct: 675 NYTCLASNSASVTTYTTSLFINV 697


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +2

Query: 332 KQNKLDFLYRLTYFVIDRSILSEKSNKFNSKREV 433
           KQN   F+Y   +  +   +L+    K+ ++R++
Sbjct: 96  KQNTKSFIYHFLHSWLGTGLLTSAGPKWQNRRKI 129


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 366 HISLLIDQSYQRNRTNLILKGRYTIAAAVWL 458
           ++SL+I+   QR R+ + L  RY    +  L
Sbjct: 118 NVSLIINYENQRTRSRIHLFVRYVFVTSYLL 148


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 422 KREVYHCSRCLAWLGLKIKDTVRLYNS 502
           K+ VY+  + L ++   IK+ +RLY S
Sbjct: 35  KKPVYNDLQELKYMERVIKEVLRLYPS 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,032
Number of Sequences: 336
Number of extensions: 2454
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)