Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307D01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    26   0.67 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.2  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   1.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.5  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   6.2  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2

Query: 385 FYNILGLD*ITTNQDLINSIKARLCHISHLNNVLRHIYKLLL 260
           F NILG D I   Q L +  K+  CH S ++ V   +   LL
Sbjct: 831 FDNILGRDTINILQLLTSETKSIFCHSSMVDRVAAMLNYFLL 872


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 141 ISNFNCF*CIYESTIIKAGNVTFGQLLVNQK 49
           I NFNC   IY +  + AGN  F  ++ + +
Sbjct: 538 IENFNCDKSIYTAVEVTAGNRLFHHIVESDR 568


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 235  YYLIVI*QDNIEGMRGIDDGSHDMILTYPIEHFKFQLLLMHI 110
            YY++     N +G  G+D  SHD+ +   ++  K  L  +HI
Sbjct: 1432 YYIV---HGNEDGHFGLDPVSHDLTVEKELDREKKSLYKLHI 1470


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 477  TYDGWHWSKK 506
            TYDG+HW+K+
Sbjct: 1076 TYDGFHWNKR 1085


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 376 ILGLD*ITTNQDLINSIKARL 314
           I+ LD ITT +++  S+KA+L
Sbjct: 199 IMHLDEITTPEEVAESVKAQL 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,687
Number of Sequences: 2352
Number of extensions: 7967
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)