Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307C10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 254 SIYGYMILVVPIQTRSQLLRTSPKTYLE 337
           S++GY  L++     SQL+  + KT L+
Sbjct: 369 SLFGYQTLLITFHIGSQLVLHTVKTVLK 396


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 149 HSLIV*S*PPVTKATCDPPREAVVSP 72
           H+L+    PP T+  C  P   ++SP
Sbjct: 218 HNLLSDKNPPNTENNCAQPVVVIMSP 243


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 388 TARIWDPRAAPRTRCQKIF 444
           T  IW P+     R +K+F
Sbjct: 478 TLHIWTPKCERLARTEKLF 496


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 388 TARIWDPRAAPRTRCQKIF 444
           T  IW P+     R +K+F
Sbjct: 478 TLHIWTPKCERLARTEKLF 496


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 388 TARIWDPRAAPRTRCQKIF 444
           T  IW P+     R +K+F
Sbjct: 478 TLHIWTPKCERLARTEKLF 496


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 388 TARIWDPRAAPRTRCQKIF 444
           T  IW P+     R +K+F
Sbjct: 478 TLHIWTPKCERLARTEKLF 496


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 41  LAYLFLKSTFFYF 3
           +++ F  STFFYF
Sbjct: 237 VSFYFFISTFFYF 249


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 41  LAYLFLKSTFFYF 3
           +++ F  STFFYF
Sbjct: 233 VSFYFFISTFFYF 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,786
Number of Sequences: 336
Number of extensions: 3390
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)