Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C10f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 148 2e-36
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 128 2e-30
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 56 1e-08
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 55 3e-08
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 55 3e-08
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 54 4e-08
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 54 4e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 52 2e-07
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 51 4e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 50 7e-07
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 50 7e-07
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 49 2e-06
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 48 5e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 46 2e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 46 2e-05
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 46 2e-05
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 45 3e-05
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 45 4e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 45 4e-05
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 45 4e-05
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 44 5e-05
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 44 6e-05
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 43 1e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 42 2e-04
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 41 6e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 40 8e-04
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 40 8e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 40 0.001
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 40 0.001
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 40 0.001
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 39 0.002
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 39 0.002
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 39 0.002
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 39 0.002
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 39 0.002
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 39 0.002
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 38 0.003
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 38 0.003
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 38 0.003
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 38 0.004
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 38 0.004
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 38 0.005
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 38 0.005
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 37 0.007
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 37 0.007
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 37 0.009
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 36 0.012
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 36 0.017
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 36 0.017
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 36 0.017
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 36 0.017
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 36 0.022
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 35 0.029
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 35 0.029
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 35 0.029
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 35 0.029
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 35 0.029
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 35 0.038
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 0.060
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 34 0.067
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 34 0.067
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 34 0.067
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 34 0.067
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 34 0.067
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.088
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 33 0.088
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 33 0.088
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 33 0.088
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 33 0.088
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.12
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 33 0.15
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 33 0.15
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 33 0.15
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 33 0.15
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 32 0.20
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 32 0.20
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 32 0.20
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 32 0.20
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 32 0.20
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 32 0.20
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 32 0.27
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 32 0.27
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 32 0.27
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 32 0.27
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 32 0.27
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 32 0.27
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 32 0.27
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 32 0.27
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 32 0.27
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 32 0.27
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 32 0.27
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 32 0.27
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 31 0.36
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 31 0.47
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 31 0.47
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 31 0.47
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 31 0.47
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 31 0.62
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 31 0.62
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 31 0.62
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 31 0.62
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 0.62
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 0.62
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 30 0.82
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 30 0.82
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 0.82
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 30 0.82
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 30 0.82
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 1.1
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 30 1.1
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 30 1.1
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 30 1.1
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 29 1.4
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 29 1.4
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 29 1.4
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 1.4
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 29 1.4
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 29 1.4
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 29 1.4
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 29 1.4
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 1.9
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 1.9
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 29 1.9
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 29 2.5
At4g32940.1 68417.m04687 vacuolar processing enzyme gamma / gamm... 29 2.5
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 2.5
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 29 2.5
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 29 2.5
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 28 3.3
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 28 3.3
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 28 3.3
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 28 4.4
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 28 4.4
At1g29980.2 68414.m03666 expressed protein contains Pfam profile... 28 4.4
At1g29980.1 68414.m03667 expressed protein contains Pfam profile... 28 4.4
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 27 5.8
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 27 5.8
At3g17940.1 68416.m02284 aldose 1-epimerase family protein simil... 27 5.8
At2g39680.1 68415.m04868 expressed protein 27 5.8
At2g08986.1 68415.m01009 hypothetical protein 27 5.8
At1g09000.1 68414.m01004 NPK1-related protein kinase, putative (... 27 5.8
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 27 7.7
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 27 7.7
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 27 7.7
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 27 7.7
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 27 7.7
At2g34510.1 68415.m04239 expressed protein contains Pfam profile... 27 7.7
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 27 7.7
At1g68510.1 68414.m07826 LOB domain protein 42 / lateral organ b... 27 7.7
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 148 bits (359), Expect = 2e-36
Identities = 70/139 (50%), Positives = 96/139 (69%), Gaps = 1/139 (0%)
Frame = +1
Query: 106 VALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS-MVAAAGFQHIRLYDLSS 282
V L T YDHTI+ W+A +G C RT+Q+PDS VN LEI+P +AAA HIRL+D++S
Sbjct: 6 VILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDVNS 65
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPV 462
+P PV T++ + NV VGFQ + WMY+G ED T +IWD RA CQK ++ A V
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRA---PGCQKEYESVAAV 122
Query: 463 NAVMLHPDQSQIMVGDQSG 519
N V+LHP+Q++++ GDQ+G
Sbjct: 123 NTVVLHPNQTELISGDQNG 141
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 128 bits (310), Expect = 2e-30
Identities = 66/142 (46%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Frame = +1
Query: 100 SQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISP-TSMVAAAGFQHIRLYDL 276
S V L T +D TI+LWQA +G C + ++PD VN LE++P + AA HIRL+DL
Sbjct: 9 SPVYLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIRLFDL 68
Query: 277 SSANPD-PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQ 453
S NP PV F +KNV VGFQ G MY+G ED + +IWD R CQ+ F+
Sbjct: 69 RSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRV---RECQREFRSV 125
Query: 454 APVNAVMLHPDQSQIMVGDQSG 519
+PVN V+LHP+Q++++ GDQ+G
Sbjct: 126 SPVNTVVLHPNQTELISGDQNG 147
Score = 30.7 bits (66), Expect = 0.62
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 172 LRTMQHPDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGF 345
L +Q +S + +SP + + A+ + +++++L + V T + + V F
Sbjct: 210 LHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHE--RWVWDCDF 267
Query: 346 QKNGTWMYTGGEDCTARIWDPRA 414
+G ++ T D TAR+W RA
Sbjct: 268 SMDGEYLVTASSDTTARLWSMRA 290
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSA 285
+ TG D T++LW +G C+R S V SL +SP A+G + I ++DLS+A
Sbjct: 514 IATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA 573
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+T + V + + G+ + +G DCT ++WD
Sbjct: 574 R--CITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 611
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 54.8 bits (126), Expect = 3e-08
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS-PTSMVAAAGF-QHIRLYDLSSA 285
L +G D IK+W+ +GVC+R V SL S S + + F Q R++ L S
Sbjct: 278 LASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSG 337
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQ------ 447
+ F + V+ F +G+ + T DCT ++WD + T C + F+
Sbjct: 338 K--LLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKT---TDCLQTFKPPPPLR 392
Query: 448 -VQAPVNAVMLHPDQSQIMV 504
A VN++ L P ++ +V
Sbjct: 393 GTDASVNSIHLFPKNTEHIV 412
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 54.8 bits (126), Expect = 3e-08
Identities = 34/149 (22%), Positives = 61/149 (40%)
Frame = +1
Query: 61 HKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVA 240
H A D+ A ++V ++ G IKLW +R S +++E P
Sbjct: 57 HTSAVDSVA-FDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFL 115
Query: 241 AAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAP 420
A+G L + T++ S+ +S + F +G W+ +GG D ++WD A
Sbjct: 116 ASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGK 175
Query: 421 RTRCQKIFQVQAPVNAVMLHPDQSQIMVG 507
K + P+ ++ HP + + G
Sbjct: 176 LLHEFKFH--EGPIRSLDFHPLEFLLATG 202
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +1
Query: 115 VTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSAN 288
+TGG D+ + LW L ++ S V+S+ ++ AG I+L+D+ A
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAK 91
Query: 289 PDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 411
V F N S V F G ++ +G D +IWD R
Sbjct: 92 --MVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIR 130
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 54.4 bits (125), Expect = 4e-08
Identities = 35/156 (22%), Positives = 66/156 (42%)
Frame = +1
Query: 40 NCLNNKFHKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEI 219
N + + + +G + + S+V + G TIKLW +RT+ S S++
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
Query: 220 SPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARI 399
P A+G L + T++ ++ V+ + F +G W+ +GGED ++
Sbjct: 110 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKV 169
Query: 400 WDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMVG 507
WD A K + Q + ++ HP + + G
Sbjct: 170 WDLTAGKLLTEFKSHEGQ--IQSLDFHPHEFLLATG 203
Score = 48.4 bits (110), Expect = 3e-06
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Frame = +1
Query: 100 SQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYD 273
S LVTGG DH + LW + ++ S ++S+ + ++ AAG I+L+D
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
Query: 274 LSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQ 453
L A V T N V F G + +G D +IWD R + C ++
Sbjct: 88 LEEAK--IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR---KKGCIHTYKGH 142
Query: 454 A-PVNAVMLHPDQSQIMVGDQ 513
VN + PD ++ G +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGE 163
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF--QHIRLYDLSS 282
+V+GG D+ +K+W +G L + + Q+ SL+ P + A G + ++ +DL +
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 54.4 bits (125), Expect = 4e-08
Identities = 35/156 (22%), Positives = 66/156 (42%)
Frame = +1
Query: 40 NCLNNKFHKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEI 219
N + + + +G + + S+V + G TIKLW +RT+ S S++
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
Query: 220 SPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARI 399
P A+G L + T++ ++ V+ + F +G W+ +GGED ++
Sbjct: 110 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKV 169
Query: 400 WDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMVG 507
WD A K + Q + ++ HP + + G
Sbjct: 170 WDLTAGKLLTEFKSHEGQ--IQSLDFHPHEFLLATG 203
Score = 48.4 bits (110), Expect = 3e-06
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Frame = +1
Query: 100 SQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYD 273
S LVTGG DH + LW + ++ S ++S+ + ++ AAG I+L+D
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
Query: 274 LSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQ 453
L A V T N V F G + +G D +IWD R + C ++
Sbjct: 88 LEEAK--IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR---KKGCIHTYKGH 142
Query: 454 A-PVNAVMLHPDQSQIMVGDQ 513
VN + PD ++ G +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGE 163
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF--QHIRLYDLSS 282
+V+GG D+ +K+W +G L + + Q+ SL+ P + A G + ++ +DL +
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/142 (20%), Positives = 58/142 (40%)
Frame = +1
Query: 82 TASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHI 261
+ + +V ++ G IKLW +R S +++E P A+G
Sbjct: 12 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 71
Query: 262 RLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKI 441
L + + T++ ++ +S + F +G W+ +GG D ++WD A K
Sbjct: 72 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 131
Query: 442 FQVQAPVNAVMLHPDQSQIMVG 507
+ P+ ++ HP + + G
Sbjct: 132 H--EGPIRSLDFHPLEFLLATG 151
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 51.2 bits (117), Expect = 4e-07
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Frame = +1
Query: 55 KFHKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEI-SPTS 231
K H L G +V +T +D T+K+W + +C+ T+ S + SLE T
Sbjct: 936 KGHDSQVSCVKMLSGERV--LTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 232 MVAAAGFQHI-RLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDP 408
++AAAG + ++D+ S + + +K + + ++ + TG +D TAR+W
Sbjct: 994 ILAAAGRDTVANIWDIRSGK--QMHKLKGHTKWIRSIRMVED--TLITGSDDWTARVW-- 1047
Query: 409 RAAPRTRCQKIFQVQA-PVNAVMLHPDQSQIMVGDQSG 519
+ R C + A PV +V P I+ G G
Sbjct: 1048 -SVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADG 1084
Score = 34.3 bits (75), Expect = 0.050
Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = +1
Query: 79 TTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLE-ISPTSMVAAAGFQ 255
T ++ + +V+G D ++ +W + L ++ DSQV+ ++ +S ++ AA
Sbjct: 901 TVRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHDG 960
Query: 256 HIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRA 414
++++D+ + V T S + + + + + G D A IWD R+
Sbjct: 961 TVKMWDVRT--DMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRS 1011
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 337 VGFQKNGTWMYTGGEDCTARIWDP 408
VG +++ + +G DC +IWDP
Sbjct: 861 VGDREDAGFFISGSTDCLVKIWDP 884
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 50.4 bits (115), Expect = 7e-07
Identities = 28/122 (22%), Positives = 52/122 (42%)
Frame = +1
Query: 40 NCLNNKFHKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEI 219
N + + + +G + + S+ + G TIKLW +RT+ S S+
Sbjct: 143 NAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNF 202
Query: 220 SPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARI 399
P A+G L + T++ ++ V+ + F +G W+ +GGED ++
Sbjct: 203 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKV 262
Query: 400 WD 405
WD
Sbjct: 263 WD 264
Score = 48.0 bits (109), Expect = 4e-06
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Frame = +1
Query: 100 SQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYD 273
S LVTGG DH + LW + ++ S ++S+ + + AAG I+L+D
Sbjct: 121 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD 180
Query: 274 LSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQ 453
L A V T N V F G + +G D +IWD R + C ++
Sbjct: 181 LEEAK--VVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR---KKGCIHTYKGH 235
Query: 454 A-PVNAVMLHPDQSQIMVGDQ 513
VN + PD I+ G +
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGE 256
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF--QHIRLYDLSS 282
+V+GG D+ +K+W +G L + + ++ SL+ P + A G + ++ +DL +
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET 309
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 50.4 bits (115), Expect = 7e-07
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS-PTSMVAAAGFQHI-RLYDLSSA 285
+V+G +D T+++W +G CL+ + V +++ + S++ ++ + + R++D S
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD-SGT 186
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAA 417
T +D + VS V F NG ++ G D T R+W+ +A
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSA 230
Score = 45.6 bits (103), Expect = 2e-05
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS-MVAAAGF-QHIRLYDLSSA 285
+V+ D T+KLW +G ++T+ + + +P S M+ + F + +R++D+++
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQK--IFQVQAP 459
V S V+ V F ++G+ + + D RIWD C K I P
Sbjct: 146 KCLKVLPAH--SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTG---HCVKTLIDDENPP 200
Query: 460 VNAVMLHPDQSQIMVG 507
V+ V P+ I+VG
Sbjct: 201 VSFVRFSPNGKFILVG 216
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 175 RTMQHPDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANP---DPVTTFEDISKNVSRV 339
+T+ + V+S++ S + +A+ + IR Y +++ N +PV F +S V
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 340 GFQKNGTWMYTGGEDCTARIWD 405
F + ++ + +D T ++WD
Sbjct: 78 AFSSDARFIVSASDDKTLKLWD 99
Score = 27.5 bits (58), Expect = 5.8
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQ-HPDSQ-VNSLEISPTS---MVAAAGFQHIRLYDL 276
++ G D+T++LW S L+T H ++Q S S T+ +V+ + + +++L
Sbjct: 213 ILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWEL 272
Query: 277 SSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
+S + E ++ V V + +G D T RIW
Sbjct: 273 NSKK--LLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQ--HIRLYDLSSA 285
+V+ YD TIKLW H G C T+ S N++ +S + +G ++RL+D+ +
Sbjct: 331 VVSAAYDRTIKLWDLHKGYCTNTVLF-TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTG 389
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 411
++ S V+ V +NG + T G D ++D R
Sbjct: 390 K--LLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTR 429
Score = 39.1 bits (87), Expect = 0.002
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT----SMVAAAGFQHIRLYDLS 279
L TGG D +K+W +SG ++++ S N L+++ T S++AA ++ ++D+S
Sbjct: 246 LFTGGQDRAVKMWDTNSGTLIKSLY--GSLGNILDMAVTHDNKSVIAATSSNNLFVWDVS 303
Query: 280 SANPDPVTTFEDISKNVSRVGFQK-NGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQA 456
S T + V V K + + + D T ++WD + C +
Sbjct: 304 SGRVRHTLTGH--TDKVCAVDVSKFSSRHVVSAAYDRTIKLWD---LHKGYCTNTVLFTS 358
Query: 457 PVNAVMLHPDQSQIMVGDQSG 519
NA+ L D + G G
Sbjct: 359 NCNAICLSIDGLTVFSGHMDG 379
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 47.6 bits (108), Expect = 5e-06
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAA-GFQHI-RLYDLSSA 285
L T YD T +LW ++G L + V + +AA+ G + R++DL +
Sbjct: 354 LGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTG 413
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 411
+ F+ K V V F NG + +GGED RIWD R
Sbjct: 414 RS--ILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 304 TFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
TFE ++RV F +G ++ T D T R+WD
Sbjct: 334 TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWD 367
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDL--SSA 285
L T YD + +W ++++ +S+V SL+I+ S A H R L SS
Sbjct: 481 LATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIAT-VSHDRTIKLWTSSG 539
Query: 286 NPD 294
N D
Sbjct: 540 NDD 542
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +1
Query: 85 ASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISP--TSMVAAAGFQH 258
A G +T G D TI+LW H G+ ++T + +V + ++ + G +
Sbjct: 24 ARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQ 83
Query: 259 IRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRA 414
+ +D+S+ + F V+ V F + + + + G D + R+WD R+
Sbjct: 84 VYYWDVSTGR--VIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 8/145 (5%)
Frame = +1
Query: 79 TTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT-SMVAAAGFQ 255
T S + + TGG D+ +K+W G T++ + + +SP S + G
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMD 243
Query: 256 H-IRLYDLSSANPDP--VTTFE----DISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRA 414
+ + ++D+ P V FE + KN+ + + +GT + G D IWD
Sbjct: 244 NKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD--T 301
Query: 415 APRTRCQKIFQVQAPVNAVMLHPDQ 489
R K+ VN + HP +
Sbjct: 302 TSRRTIYKLPGHTGSVNECVFHPTE 326
Score = 45.2 bits (102), Expect = 3e-05
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 7/171 (4%)
Frame = +1
Query: 10 KNVLLRNKYANCLNN---KFHKMAG-DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLR 177
+ + L + +C N K HK A D + GSQ+ V+ D T++ W +G ++
Sbjct: 75 REIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQI--VSASPDKTVRAWDVETGKQIK 132
Query: 178 TMQHPDSQVNSL---EISPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQ 348
M S VNS P +++ + +L+D+ + TF D ++ V F
Sbjct: 133 KMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGA--IQTFPD-KYQITAVSFS 189
Query: 349 KNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIM 501
++TGG D ++WD R T + Q + + L PD S ++
Sbjct: 190 DAADKIFTGGVDNDVKVWDLRKGEAT--MTLEGHQDTITGMSLSPDGSYLL 238
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 115 VTGGYDHTIKLWQAHSGVCLRTMQHPD----SQVNSLEISPTSMVAAAGFQHIRLYDLSS 282
+TG +DH +K+W ++ + + P + ++S+ +S T + A +RL D++S
Sbjct: 120 ITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIAS 179
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTW-MYTGGEDCTARIWDPRAAPRTRCQKIFQVQAP 459
T V V + + W +YTGG D R WD R A R Q Q
Sbjct: 180 GAFSH--TLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDNSQTQLG 237
Query: 460 VNAVML 477
V +L
Sbjct: 238 VRPPIL 243
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 100 SQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQV 204
S+ L TGG D I+ W C R + + +Q+
Sbjct: 202 SEWVLYTGGCDGAIRFWDIRRAGCFRVLDNSQTQL 236
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Frame = +1
Query: 118 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS--PTSMVAAAGFQHIRLYDLSSANP 291
TG D TIK+W +GV T+ QV L +S T M +A + ++ +DL
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK- 245
Query: 292 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQ-KIFQVQAPVNA 468
+ ++ V + + TGG D R+WD RT+ Q + + V +
Sbjct: 246 -VIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWD----IRTKMQIFVLPHDSDVFS 300
Query: 469 VMLHPDQSQIMVG 507
V+ P Q++ G
Sbjct: 301 VLARPTDPQVITG 313
Score = 33.5 bits (73), Expect = 0.088
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISP-TSMVAAAGFQHIRLYDLSSAN 288
++TG +D TIK W G + T+ + V ++ + P + +A +I+ + L
Sbjct: 310 VITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKFSLPKGE 369
Query: 289 --PDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+ ++ DI ++ V ++G M TGG+ WD
Sbjct: 370 FCHNMLSLQRDI---INAVAVNEDGV-MVTGGDKGGLWFWD 406
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/109 (23%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +1
Query: 88 SLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRL 267
SL ++ +G +D ++++W S C++T++H D V L T++ + +G + +
Sbjct: 262 SLALDMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSD-WVWGLAPHETTLASTSG-SDVYI 319
Query: 268 YDLSSANPDPVTTFEDISKNVS-RVGFQKNGTWMYTGGEDCTARIWDPR 411
+D+SS P+ D + + + G +++TGGED ++++ R
Sbjct: 320 WDVSSET--PLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIR 366
Score = 31.5 bits (68), Expect = 0.36
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 10/118 (8%)
Frame = +1
Query: 82 TASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAA--GFQ 255
T L S + T GYD +++W G+ + + + +L +VA GF
Sbjct: 167 TVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKLLVAGGTDGFI 226
Query: 256 HI--------RLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
H L+DL+ + T F + T +++G D + RIWD
Sbjct: 227 HCWKSLDGLRNLFDLTGFQKEK-TEFRLWGHEGPITSLALDMTSIFSGSWDMSVRIWD 283
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 44.8 bits (101), Expect = 4e-05
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS---MVAAA 246
DT S G+ V +VTG D T++LW A S C+ + + ++ + S V+ +
Sbjct: 408 DTCVSSSGN-VLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGS 466
Query: 247 GFQHIRLYDLSSANPD---PV-----TTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
G + ++++ L + D P+ + K+++ V +N + + TG ED TA IW
Sbjct: 467 GDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIW 526
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS----MVAAAGFQHIRLYDLS 279
L T G D + +W G C + V+S+ P S +++ + +R++DL+
Sbjct: 117 LATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLN 176
Query: 280 SANPDP--VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+ N + + E V+ + ++G +++ G D +WD
Sbjct: 177 AKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQ-HPDSQVNSLEISP-TSMVAAAGFQHIRLYDLSSA 285
++T D T+K+W G CL+T + H S + + I+ T V+ ++L++++++
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAA 417
+ + T++ V + K + TGG D +W A
Sbjct: 616 --ECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTA 657
Score = 31.9 bits (69), Expect = 0.27
Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 6/142 (4%)
Frame = +1
Query: 79 TTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT-SMVAAAGF- 252
T +L L + G+ I++W + C+R+ + + V + + ++A AG
Sbjct: 64 TALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGAD 123
Query: 253 QHIRLYDLSSANPDPVTTFEDISKNVSRVGF--QKNGTWMYTGGEDCTARIWDPRAA-PR 423
+ + ++D+ F VS + F N + +G +D T R+WD A
Sbjct: 124 RKVLVWDVDGG--FCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTE 181
Query: 424 TRCQKIFQVQ-APVNAVMLHPD 486
+C I + + V ++ L D
Sbjct: 182 KKCLAIMEKHFSAVTSIALSED 203
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 44.8 bits (101), Expect = 4e-05
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Frame = +1
Query: 118 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS--PTSMVAAAGFQHIRLYDLSSANP 291
TG D TIK+W +GV T+ QV L +S T M +A + ++ +DL
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK- 251
Query: 292 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVN-- 465
+ ++ V + + TGG D R+WD RT+ Q IF + N
Sbjct: 252 -VIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWD----IRTKMQ-IFALSGHDNTV 305
Query: 466 -AVMLHPDQSQIMVG 507
+V P Q++ G
Sbjct: 306 CSVFTRPTDPQVVTG 320
Score = 36.3 bits (80), Expect = 0.012
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISP-TSMVAAAGFQHIRLYDLSSAN 288
+VTG +D TIK W G + T+ H V ++ + P + A+A + + + L
Sbjct: 317 VVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGE 376
Query: 289 PDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
++ + ++G M TGG++ + WD
Sbjct: 377 -FCHNMLSQQKTIINAMAVNEDGV-MVTGGDNGSIWFWD 413
Score = 27.1 bits (57), Expect = 7.7
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 3/136 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSA 285
L+TGG D ++W + + + + D+ V S+ PT G I+ +DL
Sbjct: 275 LLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYG 334
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIF-QVQAPV 462
++T K+V + + D T + P+ C + Q + +
Sbjct: 335 K--TMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKG---EFCHNMLSQQKTII 389
Query: 463 NAVMLHPDQSQIMVGD 510
NA+ ++ D + GD
Sbjct: 390 NAMAVNEDGVMVTGGD 405
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 115 VTGGYDHTIKLWQAHSGVCLRTMQHPD----SQVNSLEISPTSMVAAAGFQHIRLYDLSS 282
+TG +DH +K+W ++ + + P + ++S+ +S T + A +RL D++S
Sbjct: 120 ITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIAS 179
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTW-MYTGGEDCTARIWDPRAA 417
T V V + + W +YTGG D R WD R A
Sbjct: 180 GAFS--HTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRA 223
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 100 SQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQV 204
S+ L TGG D I+ W C R + +Q+
Sbjct: 202 SEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQL 236
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 44.0 bits (99), Expect = 6e-05
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQA--HSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSA 285
LVTG YDHT+K+W A H+ + + H + + + ++A AG ++++DL
Sbjct: 194 LVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAGGNSVKVWDLIGG 253
Query: 286 NPDPVTTFEDISKNVS--RVGFQKNG-TWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQA 456
V + E +K V+ RV ++ + + + D +++D A T + A
Sbjct: 254 G-KMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVTYSMRF---PA 309
Query: 457 PVNAVMLHPDQSQIMVGDQSG 519
P+ ++ L PD S ++G +G
Sbjct: 310 PLMSLGLSPDGSTRVIGGSNG 330
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 42.7 bits (96), Expect = 1e-04
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Frame = +1
Query: 79 TTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH 258
T GG + + TG D TIK+W+ G +R ++ +NSL +S ++ F H
Sbjct: 245 TCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDH 303
Query: 259 I-RLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQ 435
R Y N + E +K + + +G +D T +W+P + + + +
Sbjct: 304 TGRQY---PPNEEKQKALERYNKTKG-----DSPERLVSGSDDFTMFLWEPSVSKQPK-K 354
Query: 436 KIFQVQAPVNAVMLHPD 486
++ Q VN V PD
Sbjct: 355 RLTGHQQLVNHVYFSPD 371
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSA 285
++TG D +K+W + +CL + + + + L +S + + A+ IR++ L
Sbjct: 320 VITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDG 379
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMY---TGGEDCTARIWDPR 411
P++ + V+ + F +Y + +D T RIWD R
Sbjct: 380 M--PISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDAR 422
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 40.7 bits (91), Expect = 6e-04
Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 2/149 (1%)
Frame = +1
Query: 79 TTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSM-VAAAGFQ 255
T L G Q L + ++LW SG ++T++ S V S E+S + A
Sbjct: 150 TLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLE-TKSPVTSAEVSQDGRYITTADGS 208
Query: 256 HIRLYDLSSANPDPVTTFEDISKNVSRVGFQ-KNGTWMYTGGEDCTARIWDPRAAPRTRC 432
++ +D AN + D+ N+ + K+G GGED R++D C
Sbjct: 209 TVKFWD---ANHFGLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGC 265
Query: 433 QKIFQVQAPVNAVMLHPDQSQIMVGDQSG 519
K PV+ V P G + G
Sbjct: 266 NK--GHHGPVHCVRFAPTGESYASGSEDG 292
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 40.3 bits (90), Expect = 8e-04
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF--QHIRLYDLSSA 285
L+TG D T+KLW+ +RT V +L P+ ++AA+ +R++D+ +
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDT- 91
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWM-YTGGEDCTARIWD 405
+ E V + F+ GT + GG + ++WD
Sbjct: 92 -NATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWD 131
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Frame = +1
Query: 88 SLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--I 261
SL Q L + +D TIK+W+ CL ++ D VNS+ +S T + +G +
Sbjct: 213 SLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGSADGTV 271
Query: 262 RLYDLSSANP-DPVTTFEDISKN---VSRVGFQKNGTWMYTGGEDCTARIWD 405
+ + T + ++K V+ + KNG +Y G D W+
Sbjct: 272 KAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWE 323
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSA 285
++TG D +K+W + CL + + + + L +S ++ A+ IR++ L
Sbjct: 260 VITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDG 319
Query: 286 NPDPVTTFEDISKNVSRVGFQ-KNGT--WMYTGGEDCTARIWDPRAA 417
PV+ + V+ + F + G+ + + +D T RIWD R A
Sbjct: 320 L--PVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGA 364
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS--PTSMVAAAGFQHIRLYDLSSA 285
+V+G +D TI++W+ +G C+R ++ ++S+ + + +V+A+ +++D +
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD-AKE 201
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARI 399
T +D S VS F NG ++ D T ++
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Score = 35.5 bits (78), Expect = 0.022
Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +1
Query: 172 LRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQK 351
L+T++ + ++ ++ S + A+ + S+ N + +E S +S + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 352 NGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAP-VNAVMLHPDQSQIMVG 507
+ + + +DCT RIWD R+ C K+ + V V +P + I+ G
Sbjct: 96 DSHYTCSASDDCTLRIWDARSP--YECLKVLRGHTNFVFCVNFNPPSNLIVSG 146
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 238 AAAGFQHI-RLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 411
A++GF + R++DL +A + F+ K V V F NG + +GGED RIWD R
Sbjct: 146 ASSGFDSLARVWDLRTARN--ILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR 202
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +1
Query: 193 DSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWM 366
D VN PT +V+ A + ++L+ ++ V T NVS V F +
Sbjct: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDII 263
Query: 367 YTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMVGDQSG 519
+ ED + R+WD A RT Q + + +HP+ + + G SG
Sbjct: 264 VSNSEDKSIRVWD--ATKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSG 312
Score = 33.9 bits (74), Expect = 0.067
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 100 SQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS--MVAAAGFQHIRLYD 273
SQ V+GG D+ IK+W + CL T+ + +++ +V+A+ Q IR+++
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
Query: 274 LSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
S V T + V F + + D T R+WD
Sbjct: 122 WQSRTCVSVLTGH--NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMV-AAAGF 252
D +L S + + +D T+K+W+A C +++ D VN++ +S V +
Sbjct: 196 DAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVYTGSAD 255
Query: 253 QHIRLY--DLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+ IR++ V T E V+ + +G+ +++G D + +W+
Sbjct: 256 RRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +1
Query: 79 TTASLGGSQVALVTGGYDHTIKLWQAHSG---VCLRTMQHPDSQVNSLEISPTS--MVAA 243
T+ G ++T D T+++W+ C T+ ++V ++ + PT+ V+A
Sbjct: 268 TSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSA 327
Query: 244 AGFQHIRLYDLSSANPDPVTTFEDISKNV--SRVGFQKNGTWMYTGGEDCTARIWDPRA 414
+ YDLSS + + D SKNV + F +G + TG +IWD ++
Sbjct: 328 SLDGTWCFYDLSSGSC--LAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKS 384
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +1
Query: 79 TTASLGGSQVALVTGGYDHTIKLWQAHSG---VCLRTMQHPDSQVNSLEISPTS--MVAA 243
T+ G ++T D T+++W+ C T+ ++V ++ + PT+ V+A
Sbjct: 268 TSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSA 327
Query: 244 AGFQHIRLYDLSSANPDPVTTFEDISKNV--SRVGFQKNGTWMYTGGEDCTARIWDPRA 414
+ YDLSS + + D SKNV + F +G + TG +IWD ++
Sbjct: 328 SLDGTWCFYDLSSGSC--LAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKS 384
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 38.7 bits (86), Expect = 0.002
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Frame = +1
Query: 139 IKLWQAHSGVCLRTMQHPDSQVNSLEISPTSM-VAAAGFQHIRLYDLSSANPDPVTTFED 315
++LW SG ++T++ S V S E+S + A ++ +D AN + D
Sbjct: 170 VRLWDVRSGKIVQTLE-TKSPVTSAEVSQDGRYITTADGSTVKFWD---ANHFGLVKSYD 225
Query: 316 ISKNVSRVGFQ-KNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQS 492
+ N+ + K+G GGED R++D C K PV+ V P
Sbjct: 226 MPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNK--GHHGPVHCVRFTPTGL 283
Query: 493 QIMVGDQSG 519
G + G
Sbjct: 284 SYASGSEDG 292
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 115 VTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSAN 288
V GG D ++++ ++G + + V+ + +PT + A+G + IR++ + AN
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPAN 303
Query: 289 PD 294
P+
Sbjct: 304 PE 305
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 38.7 bits (86), Expect = 0.002
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Frame = +1
Query: 139 IKLWQAHSGVCLRTMQHPDSQVNSLEISPTSM-VAAAGFQHIRLYDLSSANPDPVTTFED 315
++LW SG ++T++ S V S E+S + A ++ +D AN + D
Sbjct: 170 VRLWDVRSGKIVQTLE-TKSPVTSAEVSQDGRYITTADGSTVKFWD---ANHFGLVKSYD 225
Query: 316 ISKNVSRVGFQ-KNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQS 492
+ N+ + K+G GGED R++D C K PV+ V P
Sbjct: 226 MPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNK--GHHGPVHCVRFTPTGL 283
Query: 493 QIMVGDQSG 519
G + G
Sbjct: 284 SYASGSEDG 292
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 115 VTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSAN 288
V GG D ++++ ++G + + V+ + +PT + A+G + IR++ + AN
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPAN 303
Query: 289 PD 294
P+
Sbjct: 304 PE 305
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 352 NGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMVGDQSG 519
N W +G D TAR+WD RAA R + + VN V PD + G G
Sbjct: 216 NPNWFISGSCDSTARLWDTRAASRA-VRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 270
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 352 NGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMVGDQSG 519
N W +G D TAR+WD RAA R + + VN V PD + G G
Sbjct: 154 NPNWFISGSCDSTARLWDTRAASRA-VRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 208
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 352 NGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMVGDQSG 519
N W +G D TAR+WD RAA R + + VN V PD + G G
Sbjct: 216 NPNWFISGSCDSTARLWDTRAASRA-VRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 270
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +1
Query: 121 GGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYDLSSANPD 294
GG D TIK W H+G CL ++ SQV SL S ++++ GF +L +
Sbjct: 335 GGGDRTIKFWNTHTGACLNSVD-TGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMV 393
Query: 295 PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRT 426
+ + V + +G + + D T R W+ P T
Sbjct: 394 KMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPET 437
Score = 30.7 bits (66), Expect = 0.62
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +1
Query: 130 DHTIKLWQAHSGVC--LRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVT 303
DHT+ LW A +G L T+ V S+ +P A G + + SA+ +
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 304 TFEDISKNVSRVG-FQKNGTWMYTGGED 384
T + + SRVG N + TGG D
Sbjct: 219 TLK--GGHQSRVGSLAWNNHILTTGGMD 244
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 139 IKLWQAHSGVCLRTMQHP-DSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVTTFED 315
++LW + S LRT++ S+V SL + ++ G + + + V T+
Sbjct: 206 VQLWDSASNRQLRTLKGGHQSRVGSLAWN-NHILTTGGMDGLIINNDVRIRSPIVETYRG 264
Query: 316 ISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR-AAPRTRCQKIFQVQAPVNAV 471
++ V + + +G + +GG D IWD A+ + Q + +++ +AV
Sbjct: 265 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 317
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +1
Query: 121 GGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYDLSSANPD 294
GG D TIK W H+G CL ++ SQV SL S ++++ GF +L +
Sbjct: 325 GGGDRTIKFWNTHTGACLNSVD-TGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMV 383
Query: 295 PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRT 426
+ + V + +G + + D T R W+ P T
Sbjct: 384 KMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPET 427
Score = 30.7 bits (66), Expect = 0.62
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +1
Query: 130 DHTIKLWQAHSGVC--LRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVT 303
DHT+ LW A +G L T+ V S+ +P A G + + SA+ +
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 304 TFEDISKNVSRVG-FQKNGTWMYTGGED 384
T + + SRVG N + TGG D
Sbjct: 209 TLK--GGHQSRVGSLAWNNHILTTGGMD 234
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 139 IKLWQAHSGVCLRTMQHP-DSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVTTFED 315
++LW + S LRT++ S+V SL + ++ G + + + V T+
Sbjct: 196 VQLWDSASNRQLRTLKGGHQSRVGSLAWN-NHILTTGGMDGLIINNDVRIRSPIVETYRG 254
Query: 316 ISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR-AAPRTRCQKIFQVQAPVNAV 471
++ V + + +G + +GG D IWD A+ + Q + +++ +AV
Sbjct: 255 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 307
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 94 GGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 249
GG + L+TG DHT K+W + C++T++ V+++ P + G
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITG 247
Score = 31.5 bits (68), Expect = 0.36
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 130 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEI----SPTSMVAAAGFQHIRLYDLSSANPDP 297
D TIK+W S T+ VN ++ ++ + +++D + +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-- 221
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
V T E + NVS V F + TG ED T RIW
Sbjct: 222 VQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +1
Query: 88 SLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRL 267
SL Q L + +D T+K+W+ H C+ +++ D VNS+ + + + + +++
Sbjct: 142 SLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESLVFTGSADGTVKV 201
Query: 268 YDLSSANPDPV-TTFEDISKNVSRV-GFQKNGTWMYTGGEDCTARIWD 405
+ + F+ + K S V + +Y+G D W+
Sbjct: 202 WKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAVNFWE 249
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 37.1 bits (82), Expect = 0.007
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +1
Query: 193 DSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWM 366
D VN PT +V+ A + ++L+ ++ V T NVS V F +
Sbjct: 204 DRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDII 263
Query: 367 YTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMVGDQSG 519
+ ED + R+WD A RT Q + + +HP+ + + G +G
Sbjct: 264 VSNSEDKSIRVWD--ATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNG 312
Score = 35.1 bits (77), Expect = 0.029
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 100 SQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS--MVAAAGFQHIRLYD 273
SQ V+GG D+ IK+W + CL T+ + +++ + +V+A+ Q IR+++
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Query: 274 LSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
S V T + V F + + D T R+WD
Sbjct: 122 WQSRTCISVLTGH--NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 37.1 bits (82), Expect = 0.007
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANP 291
L+ +D +++L+ A+ + +H + ++ +S + +R D ++
Sbjct: 31 LLVSSWDKSVRLYDANGDLMRGEFKHGGAVLDCCFHDDSSGFSVCADTKVRRIDFNAGKE 90
Query: 292 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAP--VN 465
D + T E K V V + + TG D T + WDPR A T +I P VN
Sbjct: 91 DVLGTHE---KPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTERTQIGTYMQPERVN 147
Query: 466 AVML 477
++ L
Sbjct: 148 SLSL 151
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAH--SGV---CLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDL 276
++TG +D TIK W SG + T P+ +VNSL + +V A +H+ +YDL
Sbjct: 112 VITGSWDKTIKCWDPRGASGTERTQIGTYMQPE-RVNSLSLVGNRLVVATAGRHVNIYDL 170
Query: 277 SSANPDPVTTFEDISKNVSRVGFQKNGT 360
+ + + V NGT
Sbjct: 171 RNMSQPEQRRESSLKYQTRCVRCYPNGT 198
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 61 HKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISP 225
H+M GD S L++G D TI++W SG + M H + V + +SP
Sbjct: 537 HRMFGDANGC--NSSHVLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSP 589
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 36.3 bits (80), Expect = 0.012
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 190 PDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTW 363
P ++N++ + P S + AAG +D+ S TF+ S + V + + +
Sbjct: 158 PMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIK--MTFKGHSDYLHTVVSRSSASQ 215
Query: 364 MYTGGEDCTARIWDPRAAPRTRCQKIFQVQ 453
+ TG ED TARIWD + +C K+ Q
Sbjct: 216 ILTGSEDGTARIWDCKTG---KCVKVIGSQ 242
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 35.9 bits (79), Expect = 0.017
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTM-QHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSAN 288
+VTG D +K+W G C +++ H DS + + T + + G + Y +
Sbjct: 597 IVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKY-WDADK 655
Query: 289 PDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAP 420
+ + T E + + G ++ TG D + R WD P
Sbjct: 656 FEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEEP 699
Score = 32.3 bits (70), Expect = 0.20
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +1
Query: 139 IKLWQAHSGVCLRTMQ------HPDSQVNSLEISPTSMVAAA-GFQHIRLYDLSSANPDP 297
+ +W GVC +T+ P V S+ S +S+VA IR++D +
Sbjct: 41 VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCE- 99
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
F V+ + + K G+ + +G +D +WD
Sbjct: 100 -VNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWD 134
Score = 32.3 bits (70), Expect = 0.20
Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Frame = +1
Query: 88 SLGGSQVALVTGGY-DHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIR 264
S+ S +LV GY D +I++W G C V +L + + A+G +
Sbjct: 70 SIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDND 129
Query: 265 LYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+ + V+ + F G + + +D R+WD
Sbjct: 130 IILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWD 176
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 35.9 bits (79), Expect = 0.017
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 94 GGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 249
GG + L+TG DHT K+W + C++T++ V+++ P + G
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
Score = 31.9 bits (69), Expect = 0.27
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 130 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEI----SPTSMVAAAGFQHIRLYDLSSANPDP 297
D TIK+W S T+ VN ++ ++ + +++D + +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-- 221
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
V T E + NVS V F + TG ED T RIW
Sbjct: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 35.9 bits (79), Expect = 0.017
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSM--VAAAGFQ-HIRLYDLSS 282
L++ D T++LW+ CL H ++ V +E +P + A+ R++ LS
Sbjct: 286 LLSASKDKTVRLWRTGCDQCLHVFHH-NNYVTCVEFNPVNKNNFASGSIDGKARIWGLSE 344
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYTG 375
+ V + D+ ++S + +Q NG G
Sbjct: 345 ---ERVVAWTDVRDSISAISYQPNGNGFVVG 372
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 343 FQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVN---AVMLHPDQS 492
F +G ++ TGGED +IW + + Q Q P+N A++L P ++
Sbjct: 206 FSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQ-QEPINQQAALVLFPQKA 257
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 35.9 bits (79), Expect = 0.017
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSA 285
+V+ +D T+K+W + T+ +N++ +SP + A+G + I L+DL A
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL--A 223
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+ + E + + F N W+ E+ + RIWD
Sbjct: 224 EGKKLYSLE-AGSIIHSLCFSPNRYWLCAATEN-SIRIWD 261
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 35.5 bits (78), Expect = 0.022
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Frame = +1
Query: 118 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSAN--- 288
TG D+TIK W G L TM S V++L + + + + +RL+ LS +
Sbjct: 602 TGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDNSLLT 661
Query: 289 ------PDPVTTFEDISK-----NVSRVGFQKNGTWMYTGGEDCTARI 399
P + + + K N + + NG W++TGG D T +
Sbjct: 662 VLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTGGWDKTINV 709
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 35.1 bits (77), Expect = 0.029
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +1
Query: 112 LVTGGY--DHTIKLWQAHSGVCLRTMQHPDSQVNSL--EISPTSMVAAAGFQHIRLYDLS 279
L TGG D IK W H+G CL +++ SQV SL S ++++ GF +L
Sbjct: 316 LATGGGVGDGKIKFWNTHTGACLNSVE-TGSQVCSLLWSQSERELLSSHGFTQNQLTLWK 374
Query: 280 SANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAP 459
+ + + V + NG + + D R+W+ P +K + P
Sbjct: 375 YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTTKKAASKKYP 434
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 35.1 bits (77), Expect = 0.029
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 3/139 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH-IRLYDLSSAN 288
+++ GY +K+W S V + ++A IRLYD+ +
Sbjct: 489 MISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLK 548
Query: 289 PDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNA 468
V F + ++ + F ++G W+ + D + RIWD A + V P+ A
Sbjct: 549 M--VREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQI---DGVHVDVPITA 603
Query: 469 VMLHPDQSQIMV--GDQSG 519
+ L P+ + DQ+G
Sbjct: 604 LSLSPNMDVLATAHSDQNG 622
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 94 GGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 249
GG + L+TG DHT K+W + C++T+ V+++ P + G
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITG 247
Score = 30.7 bits (66), Expect = 0.62
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 130 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEI----SPTSMVAAAGFQHIRLYDLSSANPDP 297
D TIK+W S T+ VN ++ ++ + +++D + +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-- 221
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
V T + + NVS V F + TG ED T RIW
Sbjct: 222 VQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 94 GGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 249
GG + L+TG DHT K+W + C++T+ V+++ P + G
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITG 247
Score = 30.7 bits (66), Expect = 0.62
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 130 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEI----SPTSMVAAAGFQHIRLYDLSSANPDP 297
D TIK+W S T+ VN ++ ++ + +++D + +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-- 221
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
V T + + NVS V F + TG ED T RIW
Sbjct: 222 VQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 94 GGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 249
GG + L+TG DHT K+W + C++T+ V+++ P + G
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITG 247
Score = 30.7 bits (66), Expect = 0.62
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 130 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEI----SPTSMVAAAGFQHIRLYDLSSANPDP 297
D TIK+W S T+ VN ++ ++ + +++D + +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-- 221
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
V T + + NVS V F + TG ED T RIW
Sbjct: 222 VQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 34.7 bits (76), Expect = 0.038
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVN--SLEISPTSMVAAAGFQHIR--LYDLS 279
+VT G D +KLW G +RT + + N L + + G ++ R +YD
Sbjct: 127 VVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRR 186
Query: 280 SANPDPVTTFEDISKNV-SRVGFQKNGTWMYTGGEDCT 390
P V FE + N S F + W +G + CT
Sbjct: 187 WGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCT 224
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 268 YDLSSANPDPVTTFEDISKNVSRVGFQKNG---TWMYTGGEDCTARIWDPRAAP 420
YDL P E + V V + ++G T +G +D T ++WDPR P
Sbjct: 3 YDLEKRTP-VFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPP 55
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.5 bits (63), Expect(2) = 0.060
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 343 FQKNGTWMYTGGEDCTARIWD 405
FQ+ G ++ +GG D T +IWD
Sbjct: 285 FQEKGRFLISGGNDKTVKIWD 305
Score = 23.4 bits (48), Expect(2) = 0.060
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQH-PDSQVNSLEISPTSMVAAAGFQHIRLYD----- 273
++TGG D + LW G + + D+ NS + + V + + + D
Sbjct: 164 VITGGLDSKLVLWDFSKGRSQKIIDFGSDTNNNSGQCLNPAFVHSIAIPEMDMVDKLDKI 223
Query: 274 LSSANPDPVTTFEDISKNVSRVGFQKNGT 360
+ A D + +I +SR G G+
Sbjct: 224 CAVARGDGIVNLINIESELSRKGTSSKGS 252
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 33.9 bits (74), Expect = 0.067
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 103 QVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 249
Q+ L + +D T+KLW A G L + V SL SP A+G
Sbjct: 511 QLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASG 559
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Frame = +1
Query: 130 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS----------MVAAAGFQH-IRLYDL 276
D T K+W + ++ ++ ++ SPT +A+A F ++L+D
Sbjct: 469 DSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDA 528
Query: 277 SSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
+ +F + V + F NG ++ +G D + IW
Sbjct: 529 ELGK--MLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIW 568
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.9 bits (74), Expect = 0.067
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Frame = +1
Query: 112 LVTGGY--DHTIKLWQAHSGVCLRTMQHPDSQVNSL--EISPTSMVAAAGFQHIRLYDLS 279
L TGG D IK W H+G CL +++ SQV SL S ++++ GF L+
Sbjct: 283 LATGGGVGDGKIKFWNTHTGACLNSVE-TGSQVCSLLWSKSERELLSSHGFTQ---NQLT 338
Query: 280 SANPDPVTTFEDISKNVSRVGF---QKNGTWMYTGGEDCTARIWDPRAAPRTRCQK 438
+ +++ + SRV F +G + + D T R+W+ P +K
Sbjct: 339 LWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 124 GYDHT-IKLWQAHSGVCLRTMQHP-DSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDP 297
G D++ ++LW S +RT++ +S+V SL + ++ G + +
Sbjct: 152 GLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWN-NHILTTGGMDGKIVNNDVRIRSSI 210
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRA 414
V T+ ++ V + + ++G + +GG D IWD R+
Sbjct: 211 VETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRS 249
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 33.9 bits (74), Expect = 0.067
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSA 285
+V+ +D T+K+W + ++ +N++ +SP + A+G + I L+DL A
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL--A 223
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+ + E + + F N W+ E+ + RIWD
Sbjct: 224 EGKKLYSLE-AGSIIHSLCFSPNRYWLCAATEN-SIRIWD 261
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 33.9 bits (74), Expect = 0.067
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQ---AHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSS 282
+ +GG + +W A S V + DS N TS+ +I + S
Sbjct: 142 VASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPS 201
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRT 426
P T + ++V + GT + +GG + R+WDPR ++
Sbjct: 202 HGYTP-TIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKS 248
Score = 29.1 bits (62), Expect = 1.9
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +1
Query: 115 VTGGYDHTIKLWQAHSGVCLRTMQ-HPDSQVNSLEISPT-SMVAAAG-FQHIRLYDLSSA 285
++G D I+LW CL T H DS V +L +P+ S V + G Q + L DL++
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDS-VWALACNPSFSHVYSGGRDQCLYLTDLATR 329
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRA-APRTRCQK 438
+ T E + ++ Q N W+ T D + W +P+T Q+
Sbjct: 330 ESVLLCTKE---HPIQQLALQDNSIWVAT--TDSSVERWPAEVQSPKTVFQR 376
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSG-VCLRTMQHPDS-QVNSLEISPTSMVAAAGFQHIRLYDLSSA 285
LV+GG + +++W +G ++ H D+ +V L+ + ++ + IRL+DL
Sbjct: 228 LVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQ 287
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGED 384
+ T+ + +V + + + +Y+GG D
Sbjct: 288 R--CLHTYAVHTDSVWALACNPSFSHVYSGGRD 318
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 33.9 bits (74), Expect = 0.067
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQ---AHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSS 282
+ +GG + +W A S V + DS N TS+ +I + S
Sbjct: 142 VASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPS 201
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRT 426
P T + ++V + GT + +GG + R+WDPR ++
Sbjct: 202 HGYTP-TIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKS 248
Score = 29.1 bits (62), Expect = 1.9
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +1
Query: 115 VTGGYDHTIKLWQAHSGVCLRTMQ-HPDSQVNSLEISPT-SMVAAAG-FQHIRLYDLSSA 285
++G D I+LW CL T H DS V +L +P+ S V + G Q + L DL++
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDS-VWALACNPSFSHVYSGGRDQCLYLTDLATR 329
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRA-APRTRCQK 438
+ T E + ++ Q N W+ T D + W +P+T Q+
Sbjct: 330 ESVLLCTKE---HPIQQLALQDNSIWVAT--TDSSVERWPAEVQSPKTVFQR 376
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSG-VCLRTMQHPDS-QVNSLEISPTSMVAAAGFQHIRLYDLSSA 285
LV+GG + +++W +G ++ H D+ +V L+ + ++ + IRL+DL
Sbjct: 228 LVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQ 287
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGED 384
+ T+ + +V + + + +Y+GG D
Sbjct: 288 R--CLHTYAVHTDSVWALACNPSFSHVYSGGRD 318
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 33.5 bits (73), Expect = 0.088
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +1
Query: 112 LVTGGY--DHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS--PTSMVAAAGFQHIRLYDLS 279
L TGG D IK W H+G CL +++ SQV SL S ++++ GF +L
Sbjct: 314 LATGGGVGDGKIKFWNTHTGACLNSVE-TGSQVCSLLWSQRERELLSSHGFTQNQLTLWK 372
Query: 280 SANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQK 438
+ + + V + NG + + D R+W+ P +K
Sbjct: 373 YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTTKK 425
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 33.5 bits (73), Expect = 0.088
Identities = 21/100 (21%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS---MVAAAGFQHIRLYDLSS 282
L++ D T++LW + CL+ H D V ++ +P ++ + IR++++S+
Sbjct: 533 LLSSSMDKTVRLWDIETQSCLKLFAHND-YVTCVQFNPLDEDYFISGSLDAKIRIWNISN 591
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
V + D+ + V+ V + +G + G + R++
Sbjct: 592 RQ---VVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLY 628
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 33.5 bits (73), Expect = 0.088
Identities = 25/125 (20%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQ 255
D+ + L + +G +D T+K+W+ CL +++ D +N L + +A+
Sbjct: 175 DSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGRVYSASADG 234
Query: 256 HIRLY--------DLSSANPDPV----TTFEDISK-NVSRVGFQKNGTWMYTGGEDCTAR 396
++++ + +S++ + T E ++ +V+ V +G W+Y GG D
Sbjct: 235 KVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVI 294
Query: 397 IWDPR 411
W+ +
Sbjct: 295 GWEKK 299
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 33.5 bits (73), Expect = 0.088
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 12/110 (10%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQH--PDSQV-----NSLEISPTS-MVAAAGFQHIR- 264
L+TG D T KLW SG L T + P V + L + T V + H++
Sbjct: 94 LITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHVKR 153
Query: 265 -LYDLSSANPDPVTTFE--DISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
D D V + D K ++R + + +GGED RIWD
Sbjct: 154 IAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWD 203
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH 258
+V+GG D I++W A +G + ++ D +V E + TS+ AA H
Sbjct: 190 IVSGGEDAAIRIWDAETG---KLLKQSDEEVGHKE-AITSLCKAADDSH 234
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 33.5 bits (73), Expect = 0.088
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 172 LRTMQHPDSQVNSLEISPT---SMVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVG 342
+R+ Q +V S++ +PT S + ++ ++L+ + P V TF++ + V +
Sbjct: 99 IRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMD--RPASVRTFKEHAYCVYQAV 156
Query: 343 FQ-KNGTWMYTGGEDCTARIWDPR 411
+ K+G + DCT RIWD R
Sbjct: 157 WNPKHGDVFASASGDCTLRIWDVR 180
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 109 ALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS---MVAAAGFQHIRLYDLS 279
+ +T +D T+KLW +RT + V +P +A+G +R++D+
Sbjct: 121 SFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVR 180
Query: 280 SANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRA 414
+ D + +S + + + T D T ++WD R+
Sbjct: 181 EPGSTMIIPAHDF-EILSCDWNKYDDCILATSSVDKTVKVWDVRS 224
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.1 bits (72), Expect = 0.12
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Frame = +1
Query: 112 LVTGGY--DHTIKLWQAHSGVCLRTMQHPDSQVNSL--EISPTSMVAAAGFQHIRLYDLS 279
L TGG D I W H+G CL +++ SQV SL S +++A GF L+
Sbjct: 300 LATGGGVGDGKINFWNTHTGACLNSVE-TGSQVCSLLWSKSERELLSAHGFTQ---NQLT 355
Query: 280 SANPDPVTTFEDISKNVSRVGF---QKNGTWMYTGGEDCTARIWDPRAAPRTRCQK 438
+ +++ + SRV F +G + + D T R+W+ P +K
Sbjct: 356 LWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 70 AGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
+G+ T G Q+ L +G D TIK+W ++ C+ T++ V SL
Sbjct: 258 SGEVTCFAVGGQM-LYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL 304
Score = 27.1 bits (57), Expect(2) = 0.17
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 199 QVNSLEISPTSMVAAAGFQHIRLYDLSS-ANPDPVTTFEDISKNVSRVG-FQKNGTWMYT 372
QVN++ I+ + A I ++ ++ + DP + + V F G +Y+
Sbjct: 214 QVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYS 273
Query: 373 GGEDCTARIWD 405
G D T ++WD
Sbjct: 274 GSVDKTIKMWD 284
Score = 24.2 bits (50), Expect(2) = 0.17
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +1
Query: 130 DHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
D T+++W +SG C+ ++ + D++ SL
Sbjct: 152 DGTLRVWDCNSGQCVHSI-NLDAEAGSL 178
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 32.7 bits (71), Expect = 0.15
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSA 285
LV+GG D +KLW SG L ++ + V S++ + ++ A+ Q I+LYD+ +
Sbjct: 283 LVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTM 342
Query: 286 NPDPVTTFEDISKNVSRVGFQK-NGTWMYTGGEDCTARIW 402
+ +F +K+V+ + + + + +G D + W
Sbjct: 343 K--ELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Frame = +1
Query: 202 VNSLEISPTSMVAAAGF--QHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTG 375
V S++ PT + +G Q ++L+D S + + V V + +NG W+ T
Sbjct: 271 VKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRE--LCSLHGHKNIVLSVKWNQNGNWLLTA 328
Query: 376 GEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMVGDQS 516
+D +++D R Q V ++ HP + V S
Sbjct: 329 SKDQIIKLYDIRT--MKELQSFRGHTKDVTSLAWHPCHEEYFVSGSS 373
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
D + S Q+ ++T G D TIK+W A +GV T + ++ V S+
Sbjct: 467 DISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
D + S Q+ ++T G D TIK+W A +GV T + ++ V S+
Sbjct: 467 DISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 32.3 bits (70), Expect = 0.20
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Frame = +1
Query: 94 GGSQVALVTGGYDHTIKLWQAHSGVCLRTMQ-HPDS-----QVNSLEISPTSMVAAAGFQ 255
G S ++TG YD ++W + +G C ++ H + VNS + ++ A+ +
Sbjct: 118 GSSPRFILTGCYDGLGRVWSS-AGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDR 176
Query: 256 HIRLYDLSSANPDPVTTFEDISK-------NVSRVGFQKNGTWMYTGGEDCTARIWD 405
+RL+ A TT K +V V QK+G + + DCT +W+
Sbjct: 177 TLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 202 VNSLEISPTSMVAAAGFQH-IRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGG 378
V+S+ ++ ++ + H +R +D+ + D + F + N VG + + + GG
Sbjct: 275 VSSVVWPEHDVIYSSSWDHSVRRWDVETGK-DSLNLFCGKALNTVDVGGESSAL-IAAGG 332
Query: 379 EDCTARIWDPR 411
D R+WDPR
Sbjct: 333 SDPILRVWDPR 343
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 32.3 bits (70), Expect = 0.20
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Frame = +1
Query: 94 GGSQVALVTGGYDHTIKLWQAHSGVCLRTMQ-HPDS-----QVNSLEISPTSMVAAAGFQ 255
G S ++TG YD ++W + +G C ++ H + VNS + ++ A+ +
Sbjct: 118 GSSPRFILTGCYDGLGRVWSS-AGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDR 176
Query: 256 HIRLYDLSSANPDPVTTFEDISK-------NVSRVGFQKNGTWMYTGGEDCTARIWD 405
+RL+ A TT K +V V QK+G + + DCT +W+
Sbjct: 177 TLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 202 VNSLEISPTSMVAAAGFQH-IRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGG 378
V+S+ ++ ++ + H +R +D+ + D + F + N VG + + + GG
Sbjct: 275 VSSVVWPEHDVIYSSSWDHSVRRWDVETGK-DSLNLFCGKALNTVDVGGESSAL-IAAGG 332
Query: 379 EDCTARIWDPR 411
D R+WDPR
Sbjct: 333 SDPILRVWDPR 343
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 32.3 bits (70), Expect = 0.20
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 5/136 (3%)
Frame = +1
Query: 13 NVLLRNKYANCLNNKFHKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHP 192
N RN+ + L F + + +L + L +G +D T K+W+ C+ ++
Sbjct: 195 NFTRRNRSSAALG--FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH 252
Query: 193 DSQVNSLEISPTSMVAAAGFQH-IRLYDLSSANPDPVTTF-EDISKN---VSRVGFQKNG 357
+ VN++ +V ++++ D F E + K V+ + ++
Sbjct: 253 EDAVNAVVSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSA 312
Query: 358 TWMYTGGEDCTARIWD 405
T +Y G D T W+
Sbjct: 313 TLVYCGSSDGTVNFWE 328
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
L +G +D T+K+W+ CL ++Q D +N++
Sbjct: 264 LYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTV 297
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.3 bits (70), Expect = 0.20
Identities = 25/107 (23%), Positives = 44/107 (41%)
Frame = +1
Query: 142 KLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDIS 321
K W GV ++ D + ++ + V Q +LSS D + D S
Sbjct: 164 KSWLKKLGVLTHVLESMDCESVRTQLHQVARVQTHKKQ---FKELSSMCIDQEFSAHDGS 220
Query: 322 KNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPV 462
+ + F +G ++ + GEDC R+W RT ++ +V + V
Sbjct: 221 --ILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGV 265
Score = 30.7 bits (66), Expect = 0.62
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS---MVAAAGFQHIRLYDLSS 282
L++ D T++LW+ CLRT H ++ V + +P ++ + +R++D++
Sbjct: 336 LLSSSVDETVRLWRVGCDECLRTFTH-NNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 283 ANPDPVTTFEDI 318
T DI
Sbjct: 395 CRVVDYTDIRDI 406
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.3 bits (70), Expect = 0.20
Identities = 25/107 (23%), Positives = 44/107 (41%)
Frame = +1
Query: 142 KLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDIS 321
K W GV ++ D + ++ + V Q +LSS D + D S
Sbjct: 164 KSWLKKLGVLTHVLESMDCESVRTQLHQVARVQTHKKQ---FKELSSMCIDQEFSAHDGS 220
Query: 322 KNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPV 462
+ + F +G ++ + GEDC R+W RT ++ +V + V
Sbjct: 221 --ILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGV 265
Score = 30.7 bits (66), Expect = 0.62
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS---MVAAAGFQHIRLYDLSS 282
L++ D T++LW+ CLRT H ++ V + +P ++ + +R++D++
Sbjct: 336 LLSSSVDETVRLWRVGCDECLRTFTH-NNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 283 ANPDPVTTFEDI 318
T DI
Sbjct: 395 CRVVDYTDIRDI 406
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 289 PDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
PDPV +V V F + + ++TG D RIWD
Sbjct: 7 PDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
D S Q+ +VT G D TIK+W A +G L T + ++ V S+
Sbjct: 469 DLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
D S Q+ +VT G D TIK+W A +G L T + ++ V S+
Sbjct: 469 DLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS---MVAAAGFQHIRLYDLSS 282
L++ D T++LW + CL+ H D V ++ SP ++ + IR++ +
Sbjct: 520 LLSSSMDKTVRLWDIETKTCLKLFAHND-YVTCIQFSPVDENYFLSGSLDAKIRIWSIQD 578
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+ V + D+ + V+ + +G G R +D
Sbjct: 579 RH---VVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYD 616
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHS-GVCLRTMQHPDSQVNSLEISP--TSMVAAAGFQH-IRLYDLS 279
L T +D TIK+W A G LRT+ + V S++ P T ++ + + IR +D++
Sbjct: 565 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 624
Query: 280 SA 285
++
Sbjct: 625 AS 626
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYD 273
LV + +KLW SG C+ + + ++ +S+ P+ ++ G+Q I L++
Sbjct: 689 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN 744
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHS-GVCLRTMQHPDSQVNSLEISP--TSMVAAAGFQH-IRLYDLS 279
L T +D TIK+W A G LRT+ + V S++ P T ++ + + IR +D++
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Query: 280 SA 285
++
Sbjct: 627 AS 628
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYD 273
LV + +KLW SG C+ + + ++ +S+ P+ ++ G+Q I L++
Sbjct: 691 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN 746
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHS-GVCLRTMQHPDSQVNSLEISP--TSMVAAAGFQH-IRLYDLS 279
L T +D TIK+W A G LRT+ + V S++ P T ++ + + IR +D++
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Query: 280 SA 285
++
Sbjct: 627 AS 628
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYD 273
LV + +KLW SG C+ + + ++ +S+ P+ ++ G+Q I L++
Sbjct: 691 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN 746
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHS-GVCLRTMQHPDSQVNSLEISP--TSMVAAAGFQH-IRLYDLS 279
L T +D TIK+W A G LRT+ + V S++ P T ++ + + IR +D++
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Query: 280 SA 285
++
Sbjct: 627 AS 628
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYD 273
LV + +KLW SG C+ + + ++ +S+ P+ ++ G+Q I L++
Sbjct: 691 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN 746
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHS-GVCLRTMQHPDSQVNSLEISP--TSMVAAAGFQH-IRLYDLS 279
L T +D TIK+W A G LRT+ + V S++ P T ++ + + IR +D++
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Query: 280 SA 285
++
Sbjct: 627 AS 628
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYD 273
LV + +KLW SG C+ + + ++ +S+ P+ ++ G+Q I L++
Sbjct: 691 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWN 746
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 31.9 bits (69), Expect = 0.27
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +1
Query: 103 QVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDL 276
Q +V+ +D T+K+W + T+ V+++ +SP + A+G + + L+DL
Sbjct: 164 QPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Query: 277 SSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
A + + E + + + F N W+ E +IWD
Sbjct: 224 --AEGKKLYSLE-ANSVIHALCFSPNRYWLCAATEH-GIKIWD 262
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 31.9 bits (69), Expect = 0.27
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRT 180
+ +G DH ++LW A +G C+RT
Sbjct: 161 VASGSLDHEVRLWNAKTGECIRT 183
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 31.9 bits (69), Expect = 0.27
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRT 180
+ +G DH ++LW A +G C+RT
Sbjct: 161 VASGSLDHEVRLWNAKTGECIRT 183
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 31.5 bits (68), Expect = 0.36
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
L +G +D T+K+W+ CL +++ D VN++
Sbjct: 260 LYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV 293
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +1
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVML 477
+ TF D ++ ++ + F T + + +D + +D R K+FQ V ++
Sbjct: 77 IRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISF 136
Query: 478 HPDQSQIMVG 507
HP ++ G
Sbjct: 137 HPSGEFLLAG 146
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +1
Query: 124 GYDHTIK-LWQAHSGVCLRTMQHPDSQV----NSLEISPTSMV--AAAGFQHIRLYDLSS 282
G DH I L+ ++ C PDS V N + S T + A+ IRL+D S
Sbjct: 146 GTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVS 205
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
A V+ F K+ ++ + G+D T ++W+
Sbjct: 206 AKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWE 246
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +1
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVML 477
+ TF D ++ ++ + F T + + +D + +D R K+FQ V ++
Sbjct: 169 IRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISF 228
Query: 478 HPDQSQIMVG 507
HP ++ G
Sbjct: 229 HPSGEFLLAG 238
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +1
Query: 124 GYDHTIK-LWQAHSGVCLRTMQHPDSQV----NSLEISPTSMV--AAAGFQHIRLYDLSS 282
G DH I L+ ++ C PDS V N + S T + A+ IRL+D S
Sbjct: 238 GTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVS 297
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
A V+ F K+ ++ + G+D T ++W+
Sbjct: 298 AKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWE 338
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 VGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQV-QAPVNAVMLHPDQSQIM 501
V F +G ++ T DCTA IW + + + Q PV+ V PD ++++
Sbjct: 230 VQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLL 285
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS---MVAAAGFQHIRLYDLSS 282
L++ D T++LW S CL+ H D V ++ +P ++ + +R++ +
Sbjct: 527 LLSSSMDKTVRLWNLSSQTCLKVFSHSD-YVTCIQFNPVDDRYFISGSLDAKVRVWSI-- 583
Query: 283 ANPD-PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 402
PD V + D+ + V+ + +G + G + R++
Sbjct: 584 --PDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMY 622
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 30.7 bits (66), Expect = 0.62
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISP 225
L++ D T++LW S CL+ H D V ++ +P
Sbjct: 482 LLSSSMDKTVRLWDLSSKTCLKVFSHSD-YVTCIQFNP 518
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 70 AGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
+G+ T + G +V L +G D TIK+W ++ C T++ V SL
Sbjct: 312 SGEVTCFVVGGEV-LYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL 358
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 30.7 bits (66), Expect = 0.62
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 19 LLRNKYANCLNNKFHKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRT 180
L+ + A L F A T +L LVTG D T+ LW+ H RT
Sbjct: 2652 LVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRT 2705
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 328 VSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHP 483
V+ + +G W+ +G D + R+W+ RC K++Q + V +P
Sbjct: 426 VTSISTDSSGEWIASGSTDGSVRMWEVETG---RCLKVWQFDEAIMCVAWNP 474
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 79 TTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDS 198
T+ S S + +G D ++++W+ +G CL+ Q ++
Sbjct: 427 TSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEA 466
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
D S Q+ + T G D TIK+W A +GV T + ++ V S+
Sbjct: 467 DIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 76 DTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
D S Q+ + T G D TIK+W A +GV T + ++ V S+
Sbjct: 467 DIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 307 FEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
++ K V V + NGT + +G D TARIW+
Sbjct: 16 YQGHKKKVHSVAWNSNGTKLASGSVDQTARIWN 48
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 249
+ T D +++LW A SG C + ++ +N + P A G
Sbjct: 82 VATASGDKSVRLWDARSGKCTQQVELSGENIN-ITYKPDGTHVAVG 126
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 30.3 bits (65), Expect = 0.82
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
+ +G D +K+W +G C TM+H + +V+++
Sbjct: 230 VASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAV 263
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +1
Query: 112 LVTGGYDHTIKLW--QAHSG---VCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDL 276
++TG +D T+K W + SG + T P+ +V S+ + +V A +H+ +YDL
Sbjct: 113 VITGSWDKTVKCWDPRGASGPERTQVGTYLQPE-RVYSMSLVGHRLVVATAGRHVNIYDL 171
Query: 277 SSANPDPVTTFEDISKNVSRVGFQKNGT 360
+ + + V NGT
Sbjct: 172 RNMSQPEQRRESSLKYQTRCVRCYPNGT 199
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANP 291
L TG +D T+K W + T Q PD + +L + MV +++ +++L
Sbjct: 129 LATGSWDKTLKYWDTRQQNPVHTQQLPD-KCYTLSVKHPLMVVGTADRNLIVFNLQ---- 183
Query: 292 DPVTTFEDI 318
+P T F+ I
Sbjct: 184 NPQTEFKRI 192
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = +1
Query: 190 PDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANPDPVTTFE-DISKN--VSRVGFQKN 354
P ++SL SP + +VA + +R +++S + + + IS + V ++ +
Sbjct: 24 PADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDD 83
Query: 355 GTWMYTGGEDCTARIW 402
GT +++GG D A++W
Sbjct: 84 GTTVFSGGCDKQAKMW 99
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 30.3 bits (65), Expect = 0.82
Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Frame = +1
Query: 64 KMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPD----SQVNSLEISPTS 231
K D S GS+ +T GYD IK W +G + T ++N +
Sbjct: 327 KAVRDICFSNDGSK--FLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNI 384
Query: 232 MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
++A + I +D+++ + ++ V+ + F N T +D + R+W+
Sbjct: 385 LLAGMSDKKIVQWDINTG--EVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 VTTFEDISKNVSRVGF-QKNGTWMYTGGEDCTARIWD 405
V T+ +K VS + F K G + + G DC +IWD
Sbjct: 275 VHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWD 311
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 49 NNKFHKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHS 162
N+K H M +S ++ TG YD T+++W S
Sbjct: 205 NSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWDTRS 242
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 220 SPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNG-TWMYTGGEDCTAR 396
S TS+V + + +N + V ++ + F N +YTG +DC
Sbjct: 130 SSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKFS 189
Query: 397 IWDPRAAPRTRCQKIFQ 447
WD R +P ++FQ
Sbjct: 190 CWDIRDSPAD--NRVFQ 204
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 364 MYTGGEDCTARIWDPRAAPRTRCQKIFQVQAPVNAVMLHPDQSQIMV 504
++TG D T R+WD R+ R + + V + HP S +++
Sbjct: 226 IFTGSYDETLRVWDTRSVSRPLNETSVSLGGGVWRIKHHPSLSGVVL 272
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQ----AHSGV----CLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRL 267
LVT D+T+KLW H G+ C T ++ N + +S + A G + +
Sbjct: 896 LVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGSETNEV 955
Query: 268 YDLSSANPDPVTTFE 312
Y + P P+T+++
Sbjct: 956 YAYHRSLPMPITSYK 970
Score = 27.5 bits (58), Expect = 5.8
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS---PTSMVAAAGFQHIRLYDLSS 282
L + YD +KLW +G + + + S++ S PT + + + ++L++++
Sbjct: 769 LASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINE 828
Query: 283 ANPDPVTTFEDISKNVSRVGFQKNGTWMYT-GGEDCTARIWDPR 411
N + T +I+ NV V F + + G D +D R
Sbjct: 829 RN--CLGTIRNIA-NVCCVQFSPQSSHLLAFGSSDFRTYCYDLR 869
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 61 HKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT-SMV 237
H G T+ +L L +G DH +KL++ SG + + L + + S++
Sbjct: 60 HHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLL 119
Query: 238 AAAG 249
AAAG
Sbjct: 120 AAAG 123
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSA 285
+ TGG D LW+ +G + V+ L S + A+G ++++D SS
Sbjct: 86 VATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSG 145
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
V + + V + G + G EDC+ +W+
Sbjct: 146 TLKCV--LDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWN 183
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 73 GDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS 222
G T+ + G+ L TG + T+ +W + G C+ T V ++ +S
Sbjct: 330 GVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVS 379
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/126 (17%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Frame = +1
Query: 61 HKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHP-DSQVNSLEISPTSMV 237
H + + +L L + +D T+K+W+ CL + + D +N++ +S +
Sbjct: 163 HHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDI 222
Query: 238 -AAAGFQHIRLY--DLSSANPDP------VTTFEDISKNVSRVGFQ-KNGTWMYTGGEDC 387
+ Q I+++ +++ N V + + ++ + NG+ +++GG D
Sbjct: 223 YTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDG 282
Query: 388 TARIWD 405
+ +W+
Sbjct: 283 SILVWE 288
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 343 FQKNGTWMYTGGEDCTARIWD 405
FQ+ G ++ +GG D T +IWD
Sbjct: 259 FQEKGRFLISGGNDKTVKIWD 279
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 29.5 bits (63), Expect = 1.4
Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 2/131 (1%)
Frame = +1
Query: 73 GDTTASLGGSQVALVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF 252
G S + +GG D + HSG +R + V+SL +SP +
Sbjct: 118 GVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILVTAS 177
Query: 253 QHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTG--GEDCTARIWDPRAAPRT 426
++ ++ S + F V V F ++G ++ + GE A +W A +
Sbjct: 178 TQLKTFNCSDLK--KIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIA-VWKTDGAKKQ 234
Query: 427 RCQKIFQVQAP 459
+ ++ P
Sbjct: 235 SASCVLALEHP 245
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANP 291
+ +GG +K+W +C++ ++ S + + + A+ L + A+
Sbjct: 108 ICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASG 167
Query: 292 DPVTTFEDISKNVSR-VGFQKNGT-WMYTGGEDCTARIWDPRA-APRTRCQKIFQVQAPV 462
T +D + V R + + ++ + T G+D T +WD +P+ K Q AP
Sbjct: 168 ARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLK--QHSAPT 225
Query: 463 NAVMLHPDQSQIM 501
V P +I+
Sbjct: 226 AGVCFSPSNEKII 238
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 319 SKNVSRVGFQKNGTWMYTGGEDCTARIWDPRAAPRTRCQKI 441
+K + +G ++ TGG DC +WD R + K+
Sbjct: 206 NKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKL 246
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT-SMVAAAGFQ-HIRLYDLS 279
LV+G +++ W + G L+ + VN+L SP+ + V +AG + LY LS
Sbjct: 262 LVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLS 319
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYD 273
L TG D+ +K+W SG C T + V +L S+++A+ +R +D
Sbjct: 364 LATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYD 273
L TG D+ +K+W SG C T + V +L S+++A+ +R +D
Sbjct: 404 LATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +1
Query: 202 VNSLEISPTS-MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGG 378
VN +SP +VA G L + ++N + T + + NG TG
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLL-VDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGN 338
Query: 379 EDCTARIWDPR 411
+D T RIWD R
Sbjct: 339 QDKTCRIWDTR 349
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +1
Query: 202 VNSLEISPTS-MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGG 378
VN +SP +VA G L + ++N + T + + NG TG
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLL-VDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGN 332
Query: 379 EDCTARIWDPR 411
+D T RIWD R
Sbjct: 333 QDKTCRIWDTR 343
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
L + +D TIK+W+ CL ++ D +NS+
Sbjct: 250 LYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV 283
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 298 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 405
+T + K VS + +YTG +D T R+WD
Sbjct: 144 LTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWD 179
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
L +G D TIK+W + C++T+ S V SL
Sbjct: 287 LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSL 320
>At4g32940.1 68417.m04687 vacuolar processing enzyme gamma /
gamma-VPE nearly identical to SP|Q39119 Vacuolar
processing enzyme, gamma-isozyme precursor (EC 3.4.22.-)
(Gamma-VPE) {Arabidopsis thaliana}
Length = 494
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 46 LNNKFHKMAGDTTASLGGSQVALVTGGYDHTIKLWQAHSG 165
++N F + GD TA GGS + +G DH + H G
Sbjct: 140 VDNLFAVILGDKTAVKGGSGKVVDSGPNDHIFIFYSDHGG 179
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 28.7 bits (61), Expect = 2.5
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Frame = +1
Query: 115 VTGGYDHTIKLWQAHS-GVCLR---TMQ-HPDSQ---VNSLEISPTS--MVAAAGF-QHI 261
+ GY+ +I+++ H G R T+Q + + Q +++L SPT+ M+A + Q
Sbjct: 178 IFAGYNSSIRVFDLHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTT 237
Query: 262 RLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGG-EDCTARIWDPR 411
+Y N + + V+ V F K+G ++YTGG +D WD R
Sbjct: 238 GIY--REDNMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIR 286
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
L + D +K+W +G C TM+H +V ++
Sbjct: 281 LASASADKKVKVWDVATGTCKITMEHHTKEVQAV 314
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
L + D +K+W +G C TM+H +V ++
Sbjct: 249 LASASADKKVKVWDVATGTCKITMEHHTKEVQAV 282
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 28.3 bits (60), Expect = 3.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 343 FQKNGTWMYTGGEDCTARIWD 405
F +G ++ + GEDC R+W+
Sbjct: 265 FSHDGKYLASAGEDCVVRVWN 285
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Frame = +1
Query: 91 LGGSQVAL--VTGGYDHTIK-----LWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 249
L G+Q L TGG +K ++QA G+CL T +PD+ +N + +
Sbjct: 419 LSGNQAGLQFYTGGMLKDVKGKNGAVYQAFGGLCLETQSYPDA-LNHPKFPSQIVEPGKK 477
Query: 250 FQHIRLYDLS 279
++H L+ S
Sbjct: 478 YKHTMLFKFS 487
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 259 IRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD-PR 411
IRL+D+SS V F V + +G + + G DCT R+W+ PR
Sbjct: 81 IRLWDISSRRT--VCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPR 130
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNS-LEISPTSMVAAA-GFQHIRLYDLSSA 285
L+ +D ++L+ S + + ++ E TS + + GF IR YDL++
Sbjct: 28 LLVASWDSYLRLYDVESSSLSLELNSQAALLDCCFENESTSFTSGSDGF--IRRYDLNAG 85
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 411
D + +DIS ++ V + G + TG ++ + WD R
Sbjct: 86 TVDTIGRHDDISTSI--VYSYEKGEVISTGFDE-KIKFWDTR 124
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNS-LEISPTSMVAAA-GFQHIRLYDLSSA 285
L+ +D ++L+ S + + ++ E TS + + GF IR YDL++
Sbjct: 28 LLVASWDSYLRLYDVESSSLSLELNSQAALLDCCFENESTSFTSGSDGF--IRRYDLNAG 85
Query: 286 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 411
D + +DIS ++ V + G + TG ++ + WD R
Sbjct: 86 TVDTIGRHDDISTSI--VYSYEKGEVISTGFDE-KIKFWDTR 124
>At1g29980.2 68414.m03666 expressed protein contains Pfam profile
PF04862: Protein of unknown function, DUF642
Length = 371
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 442 ISFDTLYVVQPWDPISW 392
+ TLY VQ WDP +W
Sbjct: 118 VDLQTLYSVQGWDPYAW 134
>At1g29980.1 68414.m03667 expressed protein contains Pfam profile
PF04862: Protein of unknown function, DUF642
Length = 407
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 442 ISFDTLYVVQPWDPISW 392
+ TLY VQ WDP +W
Sbjct: 154 VDLQTLYSVQGWDPYAW 170
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 213
L +G D++IK+W + C++T+ S V SL
Sbjct: 280 LYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSL 313
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 163 GVCLRTMQHPDSQVNSLEISPTS---MVAAAGF-QHIRLYDLSSANPDPVTTFEDISKNV 330
G+ LR ++ + SL ++ +S +A G +H+ ++D+ + + V F V
Sbjct: 210 GMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTR--EHVQAFPGHRNTV 267
Query: 331 SRVGFQKNGTWMYTGGEDCTARIWD 405
S + F+ + +Y+G D T ++W+
Sbjct: 268 SCLCFRYGTSELYSGSFDRTVKVWN 292
>At3g17940.1 68416.m02284 aldose 1-epimerase family protein similar
to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149]
from [Acinetobacter calcoaceticus]; contains Pfam
profile PF01263 Aldose 1-epimerase
Length = 341
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 157 HSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSS 282
H+GVCL T P++ +N + A + H L++ S+
Sbjct: 301 HAGVCLETQGFPNA-INQSNFPSVVVKAGEKYNHTMLFEFSA 341
>At2g39680.1 68415.m04868 expressed protein
Length = 84
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 519 ATLVSNHYLGLIRMKHYCIHRSLNLEYL 436
+T V+ + G IR+KH CI +LEYL
Sbjct: 37 STRVTTFFTG-IRLKHICISHFYHLEYL 63
>At2g08986.1 68415.m01009 hypothetical protein
Length = 1218
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 281 VPIQTRSQLLRTSPKTYLELGFRKMALGCTQEVRTAQP 394
V ++ S L T PKT+++LG+ AL ++V +P
Sbjct: 586 VGVRIVSLLEDTKPKTHMDLGYTMKALRSKKKVEDTKP 623
>At1g09000.1 68414.m01004 NPK1-related protein kinase, putative
(ANP1) similar to protein kinase [Nicotiana tabacum]
gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
protein kinase 1S GI:2342422
Length = 666
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -3
Query: 402 PYPGCAV--LTSCVHPSAIFLKPN 337
P+PG +TSC+ S IF+KP+
Sbjct: 28 PFPGVLADKITSCIRKSKIFIKPS 51
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +1
Query: 253 QHIRLYDLSSANPD----PVTTFEDISKNVSRVGFQ-KNGTWMYTGGEDCTARIWDPR 411
Q I L+D+S+ D P+ +E + V + KN + G+DC IWD R
Sbjct: 192 QRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLR 249
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAA 246
L +G D+T+ +W +G+C ++ S V + P A+
Sbjct: 133 LASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIAS 177
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH 258
+V+GG D I++W A +G + ++ D +V + TS+ AA H
Sbjct: 163 IVSGGEDKVIRIWDAETG---KLLKQSDEEVGHKK-DITSLCKAADDSH 207
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH 258
+V+GG D I++W A +G + ++ D +V + TS+ AA H
Sbjct: 163 IVSGGEDKVIRIWDAETG---KLLKQSDEEVGHKK-DITSLCKAADDSH 207
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH 258
+V+GG D I++W A +G + ++ D +V + TS+ AA H
Sbjct: 163 IVSGGEDKVIRIWDAETG---KLLKQSDEEVGHKK-DITSLCKAADDSH 207
>At2g34510.1 68415.m04239 expressed protein contains Pfam profile
PF04862: Protein of unknown function, DUF642
Length = 401
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 442 ISFDTLYVVQPWDPISW 392
I T+Y VQ WDP +W
Sbjct: 150 IDLQTVYSVQGWDPYAW 166
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 LVTGGYDHTIKLWQAHSGVCLRTMQ--HPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSA 285
+ + D TI++W+ GVC+R + P + ++ + A + + +++ S+
Sbjct: 231 IASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTVFNFSTG 290
Query: 286 NPDPVTTFED 315
FED
Sbjct: 291 RIIKKLLFED 300
>At1g68510.1 68414.m07826 LOB domain protein 42 / lateral organ
boundaries domain protein 42 (LBD42) identical to LOB
DOMAIN 42 [Arabidopsis thaliana] GI:17227174; supported
by full-length cDNA gi:17227173.
Length = 233
Score = 27.1 bits (57), Expect = 7.7
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +1
Query: 145 LWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHI----RLYDLSSANPDPVTTFE 312
+W + C + D+ +N L I+ T + +A+ I R YD+ DP TT
Sbjct: 88 MWSGNWAQCQAAV---DAVLNGLPITHTPLPSASASHQIIPPHRTYDIRHVAKDP-TTGG 143
Query: 313 DISKNV-SRVGFQKNGT 360
D S+N+ +RV K+ T
Sbjct: 144 DSSENLATRVNANKSKT 160
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,090,546
Number of Sequences: 28952
Number of extensions: 294581
Number of successful extensions: 1284
Number of sequences better than 10.0: 149
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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