Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C08f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 87 8e-18
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 76 2e-14
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 66 1e-11
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 58 6e-09
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 56 2e-08
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 56 2e-08
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 51 7e-07
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 39 0.002
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 38 0.005
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 37 0.009
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 36 0.027
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 35 0.047
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 34 0.062
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18) 30 1.3
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 29 3.1
SB_19343| Best HMM Match : tRNA-synt_1e (HMM E-Value=0) 29 3.1
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 28 4.1
SB_9616| Best HMM Match : PTS_IIB_fruc (HMM E-Value=2.3) 28 4.1
SB_59414| Best HMM Match : Complex1_LYR (HMM E-Value=7.7) 28 5.4
SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_43796| Best HMM Match : SH2 (HMM E-Value=6.4) 27 7.1
SB_24728| Best HMM Match : Oxidored_q4 (HMM E-Value=8.5) 27 7.1
SB_3750| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_34490| Best HMM Match : CUB (HMM E-Value=1.3e-07) 27 9.4
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 87.0 bits (206), Expect = 8e-18
Identities = 46/109 (42%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Frame = +2
Query: 224 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 403
PD S N W+ AI G GT + GG +K M F DYP SPP +F ++HPN+Y SG
Sbjct: 1149 PDES-NTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGD 1207
Query: 404 VCLSLLDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPA 517
VC+S+L D W P ++ ILL + LLNEPN PA
Sbjct: 1208 VCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPA 1256
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
+L WE + G GT +E G +K M+F +YP PP F ++HPNV+ +G VC+S+
Sbjct: 361 DLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCISI 420
Query: 419 LDE-----------EKDWRPAITIKQILLGIQDLLNEPNVKDPA 517
L E ++ WRP T++ I+L + +L EPN + PA
Sbjct: 421 LHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESPA 464
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 269 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWR 442
G +GTP+ G++KL + + YP PPK +F P++HPN+ SG +CL L + W+
Sbjct: 4 GAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWK 63
Query: 443 PAITIKQILLGIQDLLNEPNVKDP 514
PA+ I +L I L+ EPN DP
Sbjct: 64 PALNISSVLSTILILMAEPNPDDP 87
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/92 (29%), Positives = 53/92 (57%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N++ W+ I + P+ G +++ + F +YP PPK F+ ++HPN+ G VCL +
Sbjct: 22 NILYWQGLIVPEM-PPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPI 80
Query: 419 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
+ E +W+PA +Q++ + L+++P + P
Sbjct: 81 ISPE-NWKPATKTEQVIQALLALVHDPEPEHP 111
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 335 PSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWRPAITIKQILLGIQDLLNEPNVK 508
P PPK +F P++HPN+ SG +CL L + W+PA+ I +L I L+ EPN
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPD 99
Query: 509 DP 514
DP
Sbjct: 100 DP 101
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/97 (37%), Positives = 48/97 (49%)
Frame = +2
Query: 224 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 403
P G +L W I G G+ +EGG++ L + F DYP PPK G
Sbjct: 119 PKGD-DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK---------------GM 162
Query: 404 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
VCL +L + W PA+TI ++LL I LL + N DP
Sbjct: 163 VCLDILKDS--WSPALTISKVLLSICSLLTDCNPADP 197
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 55.6 bits (128), Expect = 2e-08
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 415
N+ +E I G + GG +K + +DYP++PP + ++HPN+ G+VCLS
Sbjct: 35 NMEEFELQITPTDGA-YRGGQFKFS-VKTEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLS 92
Query: 416 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
LLD DW + ++ ++ G+ L PN++DP
Sbjct: 93 LLD---DWNESNDLEDLVQGLLFLFYNPNLEDP 122
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 50.8 bits (116), Expect = 7e-07
Identities = 28/92 (30%), Positives = 48/92 (52%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ +E I G + GG +K + DYP+ P + ++HPN+ VC+SL
Sbjct: 35 NMEEFELQITPTDGA-YRGGQFKFS-VRTTDYPNVAPSINCKTKIYHPNMDGYDGVCMSL 92
Query: 419 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
LD DW+ + ++ ++ G+ L PN++DP
Sbjct: 93 LD---DWQASNDLEDLVQGLLFLFYNPNLEDP 121
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +2
Query: 359 FEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 502
F +FHPNV +G +C++ L +KDW+P + IKQ+LL ++ LL PN
Sbjct: 147 FLTKIFHPNVAKNGEICVNTL--KKDWKPDLGIKQVLLTVKCLLIVPN 192
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 47.2 bits (107), Expect = 8e-06
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +2
Query: 263 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLDE 427
I G TP+EGG + + DYP PP+ K F+PN+Y +G VCLS++ +
Sbjct: 17 ITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSIIGD 76
Query: 428 --EKDWRPAITIKQILLGIQDLLNEPNVKDP 514
EK + ++ + LN N++DP
Sbjct: 77 VMEKSFPEFYDYYISVITEKSYLNGQNMQDP 107
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +2
Query: 143 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 322
A RL E K R + A+P+++ NL W + G T + GG Y R+I
Sbjct: 11 AVKRLMREAKELRNATEL-YHAQPLED-----NLFEWHFTVRGPPDTEFAGGRYHGRIIL 64
Query: 323 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL-LDEEKDWRPAITIKQILLGI 478
+YP PP P + +CLS+ + W+P+ +I+ +L+ I
Sbjct: 65 PPEYPMKPPSIMLLTP--NGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAI 115
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 263 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL---FHPNVYPSGTVCLS 415
I G GTP++ GL+ ++ +YP +PP + +PN+Y G VC++
Sbjct: 640 IEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 224 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 352
P G +L W I G G+ +EGG++ L + F DYP PPK
Sbjct: 159 PKGD-DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK 200
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 224 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 352
P G L W I G G+ +EGG++ L + F DYP PPK
Sbjct: 46 PKGD-KLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPK 87
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 35.5 bits (78), Expect = 0.027
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 263 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 352
I G TP+EGG Y L ++ + YP +PPK
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 35.1 bits (77), Expect = 0.035
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -1
Query: 248 SLNSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFSTKITRFMSRAS 93
+L + L S S++N+ D P L++ LN HL ++ ++T+FM + +
Sbjct: 2865 ALTGSSRLRSPSGSKRNKEDSPNVPLTLSDLNNHLNTINLQVEVTKFMHKCA 2916
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 34.7 bits (76), Expect = 0.047
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 437 WRPAITIKQILLGIQDLLNEPNVKDP 514
W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDP 28
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPP 349
NL W + G T + GG Y R+I +YP PP
Sbjct: 2 NLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPP 38
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 269 GKKGTPWEGGLYKLRMIFKDDYPSSPP 349
G GTP+EGG++K+R+ + YP P
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSP 82
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 308 LRMIFKDDYPSSPPKCKFEPPLFHPN-VYPSGTVCLSLLDEEKDWRPAITIKQILL 472
L + F +++P +PP + P V G +C+ LL K W A T++ ++L
Sbjct: 793 LNITFPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELL-TPKGWSSAYTVEAVVL 847
>SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18)
Length = 484
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 347 PKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 490
P C P +PNV + TVC+ L E DW ++ + L I +L
Sbjct: 165 PNCTMCPIKQYPNV--NRTVCIDLPLENLDWTSLVSASMLALAITAML 210
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 273 KRGLHGKVGCI-NYV*SSKMIIHQVLQNA 356
K+ LHGKVGCI + + S+ ++IH + A
Sbjct: 350 KQNLHGKVGCILSIIGSTVLVIHAPQEEA 378
>SB_19343| Best HMM Match : tRNA-synt_1e (HMM E-Value=0)
Length = 583
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 431 KDWRPAITIKQILLGIQDLLNEPNVKDP 514
K + ITIK L ++D+L +P VK P
Sbjct: 377 KSLKNFITIKDFFLAVKDILRKPEVKAP 404
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 329 DYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAI 451
D + P C F +F +P V LS+ D+E+ WR ++
Sbjct: 60 DATTDAPACFFYKEIFR--AFPYAKVILSVRDDEESWRRSL 98
>SB_9616| Best HMM Match : PTS_IIB_fruc (HMM E-Value=2.3)
Length = 462
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3
Query: 501 LGSLRRS*IPNKICFIVIAGRQSFSSSSSDKHTVPDG 391
LGSL + +P++I + AGR++F +S+ K VP G
Sbjct: 69 LGSLAKGLVPSEIRDLANAGRETFEAST--KGLVPSG 103
>SB_59414| Best HMM Match : Complex1_LYR (HMM E-Value=7.7)
Length = 350
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 329 DYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 442
D + P C F +F +P V LS+ D+E+ WR
Sbjct: 60 DATTDLPACIFYKEIF--KAFPDAKVILSVRDDEESWR 95
>SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -3
Query: 354 HFGGLDG*SSLKIIRSLYSPPSHGVPFLPGIA-HSQVIKFNE--PSGFFIGLATKPKGWS 184
H + G +L + +L P+H G+ H + FN P F G+ +
Sbjct: 506 HVKIMSGPKALPAVYTLARTPTHSRIIARGVMNHIETDLFNGLIPQCFVFGMLYQDTS-- 563
Query: 183 LRQAFRSSAKRALAIPDIFYKNNS 112
Q +RS+ K++ I ++YKN +
Sbjct: 564 --QLYRSTPKKSYLIKSLYYKNKA 585
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 281 TPWEGGLYKLRMIFKDDYPSSPPKCKF 361
T +E +Y L+++ +YP PP KF
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKF 27
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 281 TPWEGGLYKLRMIFKDDYPSSPPKCKF 361
T +E +Y L+++ +YP PP KF
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKF 27
>SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 158 AEERKAWRKDHP-FGFVARPMKNPDGSLNLMTWECAIPG---KKGTPWEGGLYKLRMIFK 325
+E+++ R+D P FGF P KNP ++ A+P + TP + Y+ +
Sbjct: 164 SEKKRRKRRDGPLFGFRTPPKKNPGYCPMYSLFKAALPAGCTGESTPSQQAPYQSTPSQR 223
Query: 326 DDYPSSP 346
Y S+P
Sbjct: 224 APYQSTP 230
>SB_43796| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 352
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 185 PYAKLSVLQLNVHLLSLTFSTKITRFMSRASIKDYS*CWAID 60
P LSV L +HLL++ + R SR+ ++ Y C +D
Sbjct: 10 PPTMLSVGSLVIHLLTVLMGYQSERHQSRSGLQRYRDCKKLD 51
>SB_24728| Best HMM Match : Oxidored_q4 (HMM E-Value=8.5)
Length = 121
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 394 WIHIGVEQWWFKFAFWRT 341
W H WWFKF F RT
Sbjct: 64 WSHKWGRGWWFKFLFIRT 81
>SB_3750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGG 298
+ + + A+E + W + +G+ + + SL + E +P K W+GG
Sbjct: 37 VVTHKSAKESRRWLSEPSYGYWPQQLNFAGISLERLCIEFGLPRKPDFRWKGG 89
>SB_34490| Best HMM Match : CUB (HMM E-Value=1.3e-07)
Length = 242
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 377 HPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVK 508
+PN YP+ C + + + ITI L + D L+ NVK
Sbjct: 159 YPNSYPNNMDCRWTIIVQAGFIVRITIAVFELAVNDFLHTSNVK 202
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,431,248
Number of Sequences: 59808
Number of extensions: 365954
Number of successful extensions: 931
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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