Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C08f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 207 4e-54
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 106 1e-23
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 106 1e-23
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 106 1e-23
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 104 4e-23
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 99 2e-21
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 98 3e-21
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 98 3e-21
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 97 5e-21
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 97 5e-21
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 97 5e-21
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 97 5e-21
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 97 8e-21
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 96 1e-20
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 95 3e-20
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 94 6e-20
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 93 1e-19
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 93 1e-19
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 92 2e-19
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 92 2e-19
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 89 2e-18
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 86 1e-17
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 82 2e-16
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 82 2e-16
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 82 2e-16
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 81 6e-16
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 79 1e-15
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 78 3e-15
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 77 5e-15
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 77 5e-15
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 75 2e-14
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 71 4e-13
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 71 5e-13
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 71 5e-13
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 71 6e-13
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 69 1e-12
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 69 3e-12
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 67 6e-12
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 67 8e-12
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 67 8e-12
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 57 8e-09
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 56 1e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 56 1e-08
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 56 1e-08
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 54 6e-08
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 53 1e-07
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 53 1e-07
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 52 2e-07
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 50 1e-06
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 48 5e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 48 5e-06
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 47 9e-06
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 43 1e-04
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 42 2e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 38 0.003
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 38 0.004
At3g59700.1 68416.m06661 lectin protein kinase, putative similar... 30 0.82
At3g59740.1 68416.m06665 receptor lectin kinase 3 (lecRK3) ident... 29 1.4
At1g33060.2 68414.m04076 no apical meristem (NAM) family protein... 29 1.4
At1g33060.1 68414.m04075 no apical meristem (NAM) family protein... 29 1.4
At3g05230.1 68416.m00571 signal peptidase subunit family protein... 28 3.3
At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ b... 28 4.4
At4g33140.1 68417.m04721 expressed protein 27 7.7
At2g33100.1 68415.m04058 cellulose synthase family protein simil... 27 7.7
At2g20250.1 68415.m02366 hypothetical protein 27 7.7
At1g31250.1 68414.m03825 proline-rich family protein contains pr... 27 7.7
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 207 bits (505), Expect = 4e-54
Identities = 89/129 (68%), Positives = 102/129 (79%)
Frame = +2
Query: 134 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLR 313
SGIA RLAEERK+WRK+HP GFVA+P DG++NLM W C IPGK GT WEGG + L
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLT 62
Query: 314 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLN 493
M F +DYPS PPKCKF FHPNVYPSGTVCLS+L+E+ WRPAIT+KQIL+GIQDLL+
Sbjct: 63 MHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLD 122
Query: 494 EPNVKDPAQ 520
PN DPAQ
Sbjct: 123 TPNPADPAQ 131
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 106 bits (254), Expect = 1e-23
Identities = 51/129 (39%), Positives = 69/129 (53%)
Frame = +2
Query: 131 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 310
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 311 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 490
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 491 NEPNVKDPA 517
+PN PA
Sbjct: 114 CDPNPNSPA 122
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 106 bits (254), Expect = 1e-23
Identities = 51/129 (39%), Positives = 69/129 (53%)
Frame = +2
Query: 131 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 310
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 311 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 490
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 491 NEPNVKDPA 517
+PN PA
Sbjct: 114 CDPNPNSPA 122
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 106 bits (254), Expect = 1e-23
Identities = 51/129 (39%), Positives = 69/129 (53%)
Frame = +2
Query: 131 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 310
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 311 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 490
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 491 NEPNVKDPA 517
+PN PA
Sbjct: 114 CDPNPNSPA 122
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 104 bits (249), Expect = 4e-23
Identities = 50/129 (38%), Positives = 70/129 (54%)
Frame = +2
Query: 131 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 310
M+ A RL + K +KD P G P N N+M W I G + TPW+GG +KL
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDN-----NIMHWNALIFGPEDTPWDGGTFKL 55
Query: 311 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 490
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + +L IQ LL
Sbjct: 56 TLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAVLTSIQSLL 113
Query: 491 NEPNVKDPA 517
+PN PA
Sbjct: 114 CDPNPDSPA 122
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 98.7 bits (235), Expect = 2e-21
Identities = 48/125 (38%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F +FHPNV +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 98.3 bits (234), Expect = 3e-21
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 85
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 86 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 143
Query: 500 NVKDP 514
N DP
Sbjct: 144 NPDDP 148
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 98.3 bits (234), Expect = 3e-21
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 97.5 bits (232), Expect = 5e-21
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 97.5 bits (232), Expect = 5e-21
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 97.5 bits (232), Expect = 5e-21
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 97.5 bits (232), Expect = 5e-21
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 96.7 bits (230), Expect = 8e-21
Identities = 46/125 (36%), Positives = 73/125 (58%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAE-----DMFHWQATIMGPPESPYAGGVFLVSIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F+ ++HPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 95.9 bits (228), Expect = 1e-20
Identities = 39/94 (41%), Positives = 61/94 (64%)
Frame = +2
Query: 233 SLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 412
S N+ W I G GTP+EGG++ L + F DYP PPK F+ P++HPN+ G++C+
Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICM 92
Query: 413 SLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
++L ++ W PA+ ++++LL I LL +PN DP
Sbjct: 93 NILKDK--WTPALMVEKVLLSILLLLEKPNPDDP 124
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 95.1 bits (226), Expect = 3e-20
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRM 316
+AS R+ +E K +KD P + A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTI 55
Query: 317 IFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 496
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +
Sbjct: 56 HFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTD 113
Query: 497 PNVKDP 514
PN DP
Sbjct: 114 PNPDDP 119
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 93.9 bits (223), Expect = 6e-20
Identities = 45/125 (36%), Positives = 71/125 (56%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+A+ R+ +E K ++D P A P G ++ W+ I G +P+ GG++ + +
Sbjct: 1 MATRRILKELKELQRDPPVSCSA----GPTGE-DMFHWQATIMGPNESPYSGGVFLVNIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F +FHPN+ +G +CL +L ++ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/125 (34%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E + ++D P A P + ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/125 (34%), Positives = 72/125 (57%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E + ++D P A P + ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 500 NVKDP 514
N DP
Sbjct: 114 NPDDP 118
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 92.3 bits (219), Expect = 2e-19
Identities = 43/125 (34%), Positives = 69/125 (55%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R++ E + ++ P A P+ D + W+ I G +P+ GG++ + +
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEED----IFHWQATIMGPHDSPYSGGVFTVSID 56
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 499
F DYP PPK F+ ++HPN+ G++CL +L E+ W PA T ++LL I LL +P
Sbjct: 57 FSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ--WSPAPTTSKVLLSICSLLTDP 114
Query: 500 NVKDP 514
N DP
Sbjct: 115 NPNDP 119
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 92.3 bits (219), Expect = 2e-19
Identities = 42/92 (45%), Positives = 55/92 (59%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ W+ I G K T +EG Y+L + F +DYP PPK KFE FHPNV G +CL +
Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDI 122
Query: 419 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
L ++ W A ++ ILL IQ LL EPN+ P
Sbjct: 123 LQDK--WSSAYDVRTILLSIQSLLGEPNISSP 152
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 89.0 bits (211), Expect = 2e-18
Identities = 41/92 (44%), Positives = 54/92 (58%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ W+ I G K T +EG Y+L + F +DYP PK KFE FHPNV G +CL +
Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDI 123
Query: 419 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
L ++ W A ++ ILL IQ LL EPN+ P
Sbjct: 124 LQDK--WSSAYDVRTILLSIQSLLGEPNISSP 153
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 86.2 bits (204), Expect = 1e-17
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 415
NL IPG GTP+EGG +++ + D YP PPK +F ++HPN+ SG +CL
Sbjct: 31 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 90
Query: 416 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
+L ++ W PA+T+K L+ IQ LL+ P KDP
Sbjct: 91 ILKDQ--WSPALTLKTALVSIQALLSAPEPKDP 121
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/114 (35%), Positives = 64/114 (56%)
Frame = +2
Query: 140 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 319
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 320 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 481
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++ L Q
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVTLIFQ 107
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 419 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 419 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 80.6 bits (190), Expect = 6e-16
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +2
Query: 263 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 442
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 65
Query: 443 PAITIKQILLGIQDLLNEPNVKDP 514
PA+ I+ +LL IQ LL+ PN DP
Sbjct: 66 PALQIRTVLLSIQALLSAPNPDDP 89
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 79.4 bits (187), Expect = 1e-15
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVYP G VC+S+
Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISI 92
Query: 419 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPA 517
L D W P T++ I+L I +L+ PN + PA
Sbjct: 93 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPA 136
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 78.2 bits (184), Expect = 3e-15
Identities = 38/98 (38%), Positives = 57/98 (58%)
Frame = +2
Query: 224 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 403
P G NL W I G GTP+EGG++ L +IF DYP PPK F+ ++H NV +G
Sbjct: 60 PKGD-NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGD 118
Query: 404 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPA 517
+ +++L + W PA+TI ++L I+ + +P PA
Sbjct: 119 LSVNILRD--SWSPALTITKVLQAIRSIFLKPEPYSPA 154
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 77.4 bits (182), Expect = 5e-15
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVY G VC+S+
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 419 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPA 517
L D W P T++ I+L I +L+ PN + PA
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPA 168
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 77.4 bits (182), Expect = 5e-15
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 CA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 433
CA I G GTP+E GL+++++ D+P SPPK F +FHPNV +G +C++ L +K
Sbjct: 43 CADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL--KK 100
Query: 434 DWRPAITIKQILLGIQDLLNEP 499
DW P++ ++ +L ++ LL EP
Sbjct: 101 DWNPSLGLRHVLSVVRCLLIEP 122
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 75.4 bits (177), Expect = 2e-14
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ W +I G T +EGG + M F ++YP SPP F ++HPNVY G VC+S+
Sbjct: 34 NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93
Query: 419 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPA 517
L D W P T++ I+L I +L+ PN + PA
Sbjct: 94 LHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPA 137
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 71.3 bits (167), Expect = 4e-13
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +2
Query: 131 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 310
+S IA RL +E W+ + P GF R N L W + G GT + Y L
Sbjct: 12 LSKIACNRLQKELSEWQVNPPTGFKHRVTDN------LQKWVIEVTGAPGTLYANETYNL 65
Query: 311 RMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 487
++ F YP P+ F PP HP++Y +G +CL +L + W PA+T+ + + I +
Sbjct: 66 QVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSM 123
Query: 488 LN 493
L+
Sbjct: 124 LS 125
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 70.9 bits (166), Expect = 5e-13
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Frame = +2
Query: 131 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 310
++ IA+ RL +E W+ + P GF R S NL W + G GT + Y+L
Sbjct: 12 LTKIATNRLQKEFMEWQTNPPSGFKHRV------SDNLQRWIIEVHGVPGTLYANETYQL 65
Query: 311 RMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 487
++ F + YP P+ F+ P HP++Y +G +CL +L + W PA+ + I L I +
Sbjct: 66 QVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYD--SWSPAMRLSSICLSILSM 123
Query: 488 LNEPNVK 508
L+ +VK
Sbjct: 124 LSSSSVK 130
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 70.9 bits (166), Expect = 5e-13
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Frame = +2
Query: 146 SARLAEERKAWRKDHPFGFVARPMKNP-DGSLNLMTW---ECAIPGKKGTPWEGGLYKLR 313
S R+ +E K D P G + + +GS + T+ + I G + T + G++ L+
Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLK 67
Query: 314 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD--EEKDWRPAITIKQILLGIQDL 487
+ + YP PP F P++HPN+ SG +CL +L+ + W+P++ I +L ++ L
Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLL 127
Query: 488 LNEPNVKD 511
L+EPN D
Sbjct: 128 LSEPNPDD 135
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 70.5 bits (165), Expect = 6e-13
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 415
N+ W I G TP+EGG+++L + YP PP+ +F +FHPNV + +G +CL
Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLD 92
Query: 416 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
+L + W PA T++ + I L+ P P
Sbjct: 93 IL--KNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 69.3 bits (162), Expect = 1e-12
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +2
Query: 131 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 310
+S IA+ RL +E W+ + P GF K D NL W + G GT + Y+L
Sbjct: 12 LSKIATNRLQKELVEWQMNPPTGF---KHKVTD---NLQRWIIEVIGAPGTLYANDTYQL 65
Query: 311 RMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 487
++ F + YP P+ F P HP++Y +G +CL +L + W PA+T+ I + I +
Sbjct: 66 QVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSICISILSM 123
Query: 488 LNEPNVK 508
L+ K
Sbjct: 124 LSSSTEK 130
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +2
Query: 131 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 310
+S IA RL +E W+ + P GF K D NL W + G GT + Y+L
Sbjct: 12 LSKIACNRLQKELSEWQLNPPTGF---RHKVTD---NLQKWTIDVTGAPGTLYANETYQL 65
Query: 311 RMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 487
++ F + YP P+ F P HP++Y +G +CL +L + W PA+T+ + + I +
Sbjct: 66 QVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYD--SWSPAMTVNSVCISILSM 123
Query: 488 LNEPNVK 508
L+ K
Sbjct: 124 LSSSPAK 130
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 67.3 bits (157), Expect = 6e-12
Identities = 33/97 (34%), Positives = 52/97 (53%)
Frame = +2
Query: 224 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 403
P+G +LM +E I +G + G + + YP PK K + ++HPN+ G
Sbjct: 54 PNGKNDLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGN 112
Query: 404 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 514
VCL++L E DW+P + I ++ G+ L EPN +DP
Sbjct: 113 VCLNILRE--DWKPVLNINTVIYGLFHLFTEPNYEDP 147
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 66.9 bits (156), Expect = 8e-12
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ WE + G G P+E G++ + + YP PPK F+ +FHPN+ G + + +
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 419 LDEEKDWRPAITIKQILLGIQDLLNEP 499
L W A+TI +LL I +L+ P
Sbjct: 118 LGSR--WSSALTINLVLLSICSILSNP 142
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 66.9 bits (156), Expect = 8e-12
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +2
Query: 239 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 418
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 419 LDEEKDWRPAITIKQILL 472
L ++ W PA+ I+ +LL
Sbjct: 93 LKDK--WSPALQIRTVLL 108
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 56.8 bits (131), Expect = 8e-09
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 331
R+ +E + KD P R ++ ++L+ I G +GTP+ GL+ + F D
Sbjct: 336 RIQDEWRILEKDLPEMIFVRAYES---RMDLL--RAVIIGAQGTPYHDGLFFFDIFFPDT 390
Query: 332 YPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL-----DEEKDWRP-AITIKQILLGIQDL 487
YPS+PP + +PN+Y G VCLSLL ++ + W P T+ Q+L+ IQ L
Sbjct: 391 YPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGL 450
Query: 488 L--NEPNVKDP 514
+ +P +P
Sbjct: 451 ILNQKPYFNEP 461
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 331
RL +E +A K+ VARP N +++ W + G +GTP+ GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 332 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 478
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 56.0 bits (129), Expect = 1e-08
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +2
Query: 263 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLD---- 424
I G +GTP+ GL+ + F D YPS PPK + +PN+Y G VCLSL+
Sbjct: 641 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTG 700
Query: 425 -EEKDWRP-AITIKQILLGIQDL-LNE-PNVKDP 514
+ + W P T+ Q+L+ IQ L LNE P +P
Sbjct: 701 KKREKWLPKESTMLQLLVSIQALILNEKPYYNEP 734
Score = 53.6 bits (123), Expect = 8e-08
Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Frame = +2
Query: 263 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL----- 421
I G +GTP+ GL+ + F D YPS PP + +PN+Y G VCLSLL
Sbjct: 307 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAG 366
Query: 422 DEEKDWRP-AITIKQILLGIQDL-LNE-PNVKDP 514
+ W P T+ Q+L+ IQ L LNE P +P
Sbjct: 367 SAREKWLPNESTMLQLLVSIQALILNEKPYFNEP 400
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 263 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSL 418
I G +GTP+ GL+ + F D YPS PP + +PN+Y G V +S+
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 331
RL +E +A K+ VARP N +++ W + G +GTP+ GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 332 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 478
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +2
Query: 269 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 445
G K + +EGG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ--TWSP 95
Query: 446 AITIKQIL-LGIQDLLNEPNVKDP 514
+ + + LL PN DP
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDP 119
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +2
Query: 269 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 445
G K + ++GG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ--TWSP 95
Query: 446 AITIKQIL-LGIQDLLNEPNVKDP 514
+ + + LL PN DP
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDP 119
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 52.8 bits (121), Expect = 1e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 331
RL EE + K G V+ M + D L + +W I G T +EG +++L++ D
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDADDIL-MQSWTGTILGPHNTAYEGKIFQLKLFCGKD 73
Query: 332 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 505
YP SPP +F+ + V P +G V S +WR T++ +L+ + +++++ N
Sbjct: 74 YPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNR 133
Query: 506 K 508
K
Sbjct: 134 K 134
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 331
RL EE + K G V+ M + D + + +W I G T +EG +++L++ +
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDAD-DIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKE 73
Query: 332 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 505
YP SPP +F+ + V P +G V SL +WR T++ IL+ + ++++ N
Sbjct: 74 YPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNR 133
Query: 506 K 508
K
Sbjct: 134 K 134
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 263 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLDE--- 427
I G GTP++ GL+ DYPS PP + +PN+Y G VCLSLL+
Sbjct: 886 IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTG 945
Query: 428 --EKDWRP-AITIKQILLGIQDLL 490
+ W P + +I Q+L+ +Q L+
Sbjct: 946 RGNEVWDPKSSSILQVLVSLQGLV 969
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 269 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 445
G + ++GG++K+++ + YP P F ++HPNV SG VCL ++++ W P
Sbjct: 38 GPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ--TWSP 95
Query: 446 AITIKQILLG-IQDLLNEPNVKDP 514
+ + + LL PN DP
Sbjct: 96 MFDLINVFESFLPQLLLYPNPSDP 119
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.6 bits (108), Expect = 5e-06
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = +2
Query: 260 AIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP--PLFHPNVYPSGTVCLSLLDE-- 427
A+ G GTP+ GL+ ++ YP PP + +PN+Y SG VCLSLL+
Sbjct: 697 ALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWS 756
Query: 428 ---EKDWRP-AITIKQILLGIQDL-LNE 496
+ W + +I Q+LL Q L LNE
Sbjct: 757 GSGTEVWNAGSSSILQLLLSFQALVLNE 784
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +2
Query: 143 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 322
A R+ +E K + + F++ P++ N+ W+ AI G T +EGG+Y R+
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEE-----NIFEWQFAIRGPGDTEFEGGIYHGRIQL 66
Query: 323 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 478
DYP PP P + + +CLS+ + + W+P+ +++ L+ +
Sbjct: 67 PADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVAL 117
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 42.7 bits (96), Expect = 1e-04
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 331
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 74
Query: 332 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 469
YP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 YPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 121
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 331
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 75
Query: 332 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 481
YP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 YPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 38.3 bits (85), Expect = 0.003
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TPWEGGLYKLRMIFKD 328
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 74
Query: 329 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 469
DYP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 DYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 122
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 37.9 bits (84), Expect = 0.004
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TPWEGGLYKLRMIFKD 328
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 75
Query: 329 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 481
DYP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 DYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 127
>At3g59700.1 68416.m06661 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 661
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 263 SHIPKSLNSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFS 126
+H+ ++N + + S+ A + +DG + KLS++ V LS+ +S
Sbjct: 146 NHVGININGLRSVASASAGYYDDKDGSFKKLSLISREVMRLSIVYS 191
>At3g59740.1 68416.m06665 receptor lectin kinase 3 (lecRK3)
identical to receptor lectin kinase 3 [Arabidopsis
thaliana] gi|4100060|gb|AAD00733
Length = 659
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -1
Query: 263 SHIPKSLNSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFS 126
+H+ ++N + + S+ A + DG + KLS++ V LS+ +S
Sbjct: 140 NHVGININGLTSVASASAGYYDDEDGNFKKLSLISTKVMRLSIVYS 185
>At1g33060.2 68414.m04076 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 652
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 305 YTAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRD 189
Y + P +S F Q SH+ ++++ N + SR+NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At1g33060.1 68414.m04075 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 648
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 305 YTAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRD 189
Y + P +S F Q SH+ ++++ N + SR+NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At3g05230.1 68416.m00571 signal peptidase subunit family protein
contains Pfam profile: PF04573 signal peptidase subunit
Length = 167
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 176 WRKDHPFGFVARPMKNPDGSLNLMT-WECAIPGKK 277
W F FVA + P SLN ++ W+ IP K+
Sbjct: 75 WNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKE 109
>At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ
boundaries domain protein 15 (LBD15) identical to
SP|Q8L5T5 LOB domain protein 15 {Arabidopsis thaliana};
similar to ASYMMETRIC LEAVES2 [Arabidopsis thaliana]
GI:19918971
Length = 224
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 152 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECA 262
++ E AW H + RPM P G+LN +T CA
Sbjct: 14 KIKREADAW--PHQMAGIRRPMSGPPGTLNTIT-PCA 47
>At4g33140.1 68417.m04721 expressed protein
Length = 353
Score = 27.1 bits (57), Expect = 7.7
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 12/66 (18%)
Frame = -3
Query: 315 IRSLYSPPSHGVPFLPGIAHS-----QVI-KFNEPSGFFIGL------ATKPKGWSLRQA 172
+RSLYSP S + F AH Q+ N SG GL KPKG++LR
Sbjct: 32 LRSLYSPRSIAIRFHGDFAHRLYNPIQIYNNNNNNSGSCNGLFKVKGGGGKPKGFTLRSC 91
Query: 171 FRSSAK 154
F S K
Sbjct: 92 FDSHKK 97
>At2g33100.1 68415.m04058 cellulose synthase family protein similar
to gi:2827143 from Arabidopsis thaliana (Ath-B)
Length = 1036
Score = 27.1 bits (57), Expect = 7.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 394 WIHIGVEQWWFKFAFW 347
W IG+E+WW FW
Sbjct: 871 WSGIGLEEWWRNEQFW 886
>At2g20250.1 68415.m02366 hypothetical protein
Length = 559
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -3
Query: 444 GRQSFSSSSSDKHTVPDGYTLGWNSGG 364
GR S SS S D++TVP G L SGG
Sbjct: 141 GRSS-SSFSRDRYTVPSGDNLRSESGG 166
>At1g31250.1 68414.m03825 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
similar to prolin rich protein GB:S44189 GI:433706 from
[Zea mays]
Length = 165
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 335 PSSPPKCKFEPPLFHPNVYPSGT 403
P++ P K PP P+V P+GT
Sbjct: 113 PNASPSVKLTPPYASPSVRPTGT 135
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,765,474
Number of Sequences: 28952
Number of extensions: 270432
Number of successful extensions: 819
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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