Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C04f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 4e-12
SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_28264| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_58415| Best HMM Match : PADR1 (HMM E-Value=3.9) 49 3e-06
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_51940| Best HMM Match : Glyco_transf_22 (HMM E-Value=1.8) 31 0.58
SB_31152| Best HMM Match : DUF112 (HMM E-Value=4.3) 31 0.58
SB_12539| Best HMM Match : VWA (HMM E-Value=0.00021) 30 1.0
SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35) 30 1.0
SB_24348| Best HMM Match : TPR_2 (HMM E-Value=2.1e-17) 29 1.8
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 29 1.8
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 29 2.3
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 29 2.3
SB_59558| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_49294| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 29 3.1
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 28 4.1
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 28 5.4
SB_27203| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 5.4
SB_7244| Best HMM Match : YL1 (HMM E-Value=0.57) 28 5.4
SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1) 27 7.1
SB_57035| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_31978| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 9.4
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 27 9.4
SB_49756| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 72.1 bits (169), Expect = 3e-13
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 RGPNKVPIYSMXXXXXXXXXXXXXGDINKLAPIVTMPFLITYASIDYSYFALAQTFDLQH 433
RG NK P + G++N LAPIVTMPFL+TYASIDY+YF LA ++DL+
Sbjct: 410 RGANKEPYVASIFVAVIAMLFILIGNLNALAPIVTMPFLVTYASIDYAYFKLAMSYDLKQ 469
Query: 434 KREMRFQG-QSQRDTQ 478
K+++ G + QRD++
Sbjct: 470 KQKLLDAGCRQQRDSE 485
>SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/93 (32%), Positives = 51/93 (54%)
Frame = +2
Query: 125 LLLAGLYVSSMSSCLGAMYGTPRVLQSIANEKVIPGLDILGHGRGPNKVPIYSMXXXXXX 304
++ AG++ S++SS + ++ G P+ Q++ +K+ P +D G G GP P
Sbjct: 336 IVTAGIFASTLSSAIASIVGAPKTFQAVCKDKLFPKIDYFGVGYGPGNEPKRGYVLAFLI 395
Query: 305 XXXXXXXGDINKLAPIVTMPFLITYASIDYSYF 403
GD+N +API++ FLI YA I+Y+ F
Sbjct: 396 ACAFTAIGDLNAIAPIISNFFLIVYALINYATF 428
>SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 60.9 bits (141), Expect = 6e-10
Identities = 26/94 (27%), Positives = 51/94 (54%)
Frame = +2
Query: 125 LLLAGLYVSSMSSCLGAMYGTPRVLQSIANEKVIPGLDILGHGRGPNKVPIYSMXXXXXX 304
L+ G++ +++SS L ++ G P+ Q++ + + P + G G GP + P
Sbjct: 10 LVTCGIFAATLSSALASLVGAPKTFQALCKDNIFPYIGYFGIGVGPGEEPRRGYILTFII 69
Query: 305 XXXXXXXGDINKLAPIVTMPFLITYASIDYSYFA 406
G++N +AP+++ FL++YA I+Y+ FA
Sbjct: 70 AVGFVAVGNLNVIAPVISNFFLMSYALINYAVFA 103
>SB_28264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/39 (56%), Positives = 35/39 (89%)
Frame = +2
Query: 329 DINKLAPIVTMPFLITYASIDYSYFALAQTFDLQHKREM 445
++N LAPIVTMPFL+TYA+I+Y+YF LA +++L+ K+++
Sbjct: 22 NLNALAPIVTMPFLVTYAAIEYTYFKLAMSYNLKQKQKL 60
>SB_58415| Best HMM Match : PADR1 (HMM E-Value=3.9)
Length = 127
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +2
Query: 254 RGPNKVPIYSMXXXXXXXXXXXXXGDINKLAPIVTMPFLITYASIDYSYFALAQTFDLQH 433
RG K P + G++N LAP MPFL+TYA+I+Y+YF LA +++L+
Sbjct: 53 RGAKKRPYVASIFVAVISMLFILIGNLNALAP---MPFLVTYAAIEYAYFNLALSYNLEQ 109
Query: 434 KREM 445
K+++
Sbjct: 110 KQKL 113
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 277 IFDGRSCHRDG--HIHYNRRHKQARTHRHYAIPHH 375
+++G+SC DG H H+ + H Q + H H+ HH
Sbjct: 224 VYNGKSC-GDGKQHHHHKQHHHQQQRHHHHEQHHH 257
>SB_51940| Best HMM Match : Glyco_transf_22 (HMM E-Value=1.8)
Length = 414
Score = 31.1 bits (67), Expect = 0.58
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 8 ITTGTFLYLMFIITLAATVTREALLKNFSITADISAVIVLL--LAGLYVSSMS--SCLGA 175
IT G+ +YL+ + L +T + L N +T D +VLL L GLY + ++ SCL
Sbjct: 146 ITCGSRMYLVLVTVLPVLLTVLSGLYNTRVTCDSRMYLVLLTVLLGLYNTGVTCDSCLYN 205
Query: 176 MYGTPRVLQSIANEKVIPGL 235
T + V+PGL
Sbjct: 206 ARVTCDSRMYLVLLTVLPGL 225
>SB_31152| Best HMM Match : DUF112 (HMM E-Value=4.3)
Length = 400
Score = 31.1 bits (67), Expect = 0.58
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 8 ITTGTFLYLMFIITLAATVTREALLKNFSITADISAVIVLL--LAGLYVSSMS--SCLGA 175
IT G+ +YL+ + L +T + L N +T D +VLL L GLY + ++ SCL
Sbjct: 267 ITCGSRMYLVLVTVLPVLLTVLSGLYNTRVTCDSRMYLVLLTVLLGLYNTGVTCDSCLYN 326
Query: 176 MYGTPRVLQSIANEKVIPGL 235
T + V+PGL
Sbjct: 327 ARVTCDSRMYLVLLTVLPGL 346
>SB_12539| Best HMM Match : VWA (HMM E-Value=0.00021)
Length = 450
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = -3
Query: 261 GPLPCPSISKPGITFSLAMLCNTLG-VPYMAPKHELIELTYNPANSNTITADMSAVIEKF 85
G LP S +K +TF + G V ++ P ++ Y P N+ITA + V +
Sbjct: 114 GNLPAESTAKVELTFVCELTVEKEGSVCFLLPT--VLNPRYTPQGGNSITASLPRVDSAY 171
Query: 84 FSKASLVTVAASVIMNMR--YKKVPVVIAA 1
L+ +AS I + + K+ VVI++
Sbjct: 172 EFDFELLVQSASEIQEITSPHSKLNVVISS 201
>SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35)
Length = 1003
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 216 SLAMLCNTLGVPYMAPKHELIELTYNPANSNTITADMSAVIEKFFSKASLV 64
++ C+ L VP +AP + + TYNP +T + I F + L+
Sbjct: 73 AIQRFCSELQVPQVAPLTDGLSFTYNPCEQQLLTRMSTGYIPLFKAIVDLI 123
>SB_24348| Best HMM Match : TPR_2 (HMM E-Value=2.1e-17)
Length = 463
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 403 KVRIIDTSVCDEEWHSDDGCELVYVADY 320
KV IID S+ E WH+ L+++ D+
Sbjct: 420 KVIIIDDSIDHEVWHNGTSFRLIFIVDF 447
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 298 HRDGHIHYNRRHKQARTHRHYAIPHH 375
H H H+++RH+ HRH HH
Sbjct: 318 HHHHHHHHHQRHRHRHRHRHRHHHHH 343
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 298 HRDGHIHYNRRHKQARTHRHYAIPHH 375
H H H RH+ HRH+ HH
Sbjct: 320 HHHHHHHQRHRHRHRHRHRHHHHHHH 345
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 292 SCHRDGHIHYNRRHKQARTHRHYAIPHH 375
S HR HIH H+ R HRH HH
Sbjct: 87 STHR--HIHRQHHHQHYRHHRHQHYRHH 112
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 29.1 bits (62), Expect = 2.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 310 HIHYNRRHKQARTHRHYAIPHH 375
H+H++R H + + H+ PHH
Sbjct: 572 HLHHHRHHHRHHHYHHHHYPHH 593
>SB_59558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/88 (19%), Positives = 41/88 (46%)
Frame = +2
Query: 125 LLLAGLYVSSMSSCLGAMYGTPRVLQSIANEKVIPGLDILGHGRGPNKVPIYSMXXXXXX 304
L+ AG +S +GA++ PR+L ++A++ +I L ++PI++
Sbjct: 311 LIAAGALCGLTASLIGALFPLPRLLYAMASDGLI--FTFLARIHPRTEIPIFATVIAGVL 368
Query: 305 XXXXXXXGDINKLAPIVTMPFLITYASI 388
++ +L ++++ L+ Y +
Sbjct: 369 AAVLALLFELQELVEMMSIGTLLAYTIV 396
>SB_49294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 403 KVRIIDTSVCDEEWHSDDG 347
K +ID+S CD WH DG
Sbjct: 50 KCGVIDSSTCDSSWHYFDG 68
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Frame = -3
Query: 330 SPIIMNVTVTMATTTIEYIGTLF-------GPLPCPSISKPGITFSLAML-CNTL---GV 184
+P++M T + + TI ++ T PLP P+I T L M+ +TL +
Sbjct: 26 TPLLMVTTSPLTSPTIPFLATTTPLLMVTTSPLPSPTIPFLATTTPLLMVTTSTLPPPTI 85
Query: 183 PYMAPKHELIELTYNPANSNTI 118
P++A L+ +T +P S TI
Sbjct: 86 PFLATTTPLLMVTTSPLPSPTI 107
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -3
Query: 309 TVTMATTTIEYIGTLFGPLPCPSISKPGITFSLAMLCNT----LGVPYMAPKHELIELTY 142
T+ TT + PLP P+I T SL M+ + +P++A L+ +T
Sbjct: 194 TIPFLATTTPLLMVTTSPLPPPTIPFLATTTSLLMVTTSPLPPPTIPFLATTAPLLMVTT 253
Query: 141 NPANSNTI 118
+P + TI
Sbjct: 254 SPLPTPTI 261
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 277 IFDGRSCHRDGHIHYNRRHKQARTHRHYAIPHHIR*YRLFLL 402
IF+ HR H HY+ + +Q + H H+ H+ YR FL+
Sbjct: 1028 IFNHYHHHRRRHHHYHHQ-QQHQFHHHHHHTHYNYHYRHFLI 1068
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 310 HIHYNRRHKQARTHRHYAIPHH 375
H H++RR ++ R H HY +H
Sbjct: 628 HHHHHRRRRRRRRHHHYHYYYH 649
>SB_27203| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 527
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 361 HSDDGCELVYVADYNECDRHDGNYD-HRIYRYFVRTSPMSKYI 236
+SDDG + N + +GNYD + + R + +P ++Y+
Sbjct: 394 YSDDGANWTNYRENNTTRKFNGNYDRNSVVRQVLYQAPAARYV 436
>SB_7244| Best HMM Match : YL1 (HMM E-Value=0.57)
Length = 412
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -3
Query: 285 IEYIGTLFGPLPCPSISKPGITFSLAMLCNTLGVPYMAPKHELIELTYNPANSNTITADM 106
+E G L P+ C S G+TFS ++ + + P +E T NP S + ++
Sbjct: 229 VEGAGELISPIKCDSKGHRGVTFSRSLDPVPMENDHRVPVYE--SDTQNPMQSTPLVSEA 286
Query: 105 SA 100
A
Sbjct: 287 PA 288
>SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1)
Length = 175
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1
Query: 310 HIHYNRRHKQARTHRHYAIPHHIR*YR 390
H HYN H H H ++I YR
Sbjct: 99 HYHYNHHHHHFHLHHHLHYQNYIHPYR 125
>SB_57035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 403 KVRIIDTSVCDEEWHSDDGCELVYVADYNECDRHDGNYD 287
KV ++++ DEE +DD E + YNE D YD
Sbjct: 28 KVVVVESDTSDEENSADDE-EEESMESYNELDEPQATYD 65
>SB_31978| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 287
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 358 SDDGCELVYVADYNECDRHDGNYD-HRIYRYFVRTSPMSKYI 236
SDDG + N + +GNYD + + R + +P ++Y+
Sbjct: 221 SDDGANWTSYRENNTTRKFNGNYDRNSVVRQVLYQAPAARYV 262
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 298 HRDGHIHYNRRHKQARTHRHYAIPHH 375
H H H++ H Q H H+ HH
Sbjct: 210 HHQHHQHHHHHHHQHNHHHHHHNHHH 235
>SB_49756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 27.1 bits (57), Expect = 9.4
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Frame = -3
Query: 390 SILAYVMRNGIVTMGAS-LFMSPIIMNVTVTMA-------TTTIEYIGTLFGPLPCPSIS 235
S L Y RN I T A + + +M + MA T +EY+ T FG P +
Sbjct: 13 SCLIYEARNNIDTQKADEIQLKADLMKINPNMALAQILSPTDVLEYVDTKFGRSPKGPYA 72
Query: 234 KPGITF---SLAMLCNTLGVPYMA 172
+TF + ++ C+ VP +A
Sbjct: 73 SYQLTFTESNFSVFCDNDSVPRIA 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,527,212
Number of Sequences: 59808
Number of extensions: 342494
Number of successful extensions: 1092
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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