Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C03f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0446 - 3371829-3372132,3374691-3375673 31 0.42
03_01_0455 + 3487354-3488090,3489172-3489255,3489942-3490554,349... 31 0.42
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 31 0.56
07_03_1003 + 23239829-23240121,23240257-23240349,23240785-232409... 31 0.74
03_06_0680 - 35497868-35497884,35498058-35501961 31 0.74
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 0.98
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 30 0.98
04_03_0991 - 21500143-21500799,21500834-21501172 30 0.98
12_02_1009 + 25268666-25269295 30 1.3
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 30 1.3
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 30 1.3
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 30 1.3
05_02_0006 - 5541290-5541961 29 1.7
03_03_0217 + 15500943-15502196 29 1.7
09_02_0543 + 10427321-10428315,10428440-10429154 29 2.3
08_02_1351 + 26318023-26318665,26319386-26319543,26320843-263209... 29 2.3
06_03_0969 - 26413534-26413594,26415020-26415318 29 2.3
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365... 29 2.3
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 29 2.3
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 29 2.3
11_08_0008 + 27591454-27592154,27595078-27595253,27595774-275959... 29 3.0
03_05_0267 - 22538631-22539452 29 3.0
11_01_0098 - 724413-724449,725200-725690 28 4.0
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 28 4.0
07_03_1330 + 25848372-25849157 28 4.0
11_01_0066 - 536281-537196,537397-537452 28 5.2
06_03_1280 - 28930959-28931540 28 5.2
04_03_1022 - 21778315-21779007 28 5.2
03_02_0463 - 8673313-8673639,8674040-8674126,8674710-8674790,867... 28 5.2
12_01_0182 + 1345209-1347065 27 6.9
10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869 27 6.9
10_02_0099 - 5295513-5296400 27 6.9
07_03_1160 - 24430240-24431268 27 6.9
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 27 6.9
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 27 6.9
04_01_0406 - 5345149-5345935,5346302-5346339 27 6.9
01_06_0044 - 25922298-25923434 27 6.9
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 27 9.1
09_04_0249 + 16070331-16070828 27 9.1
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 27 9.1
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 27 9.1
02_05_0686 - 30900748-30902167,30903442-30904742 27 9.1
02_02_0343 + 9163976-9165220 27 9.1
01_02_0036 + 10468636-10468938,10469014-10469109,10469247-104694... 27 9.1
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3
Query: 306 TGTRAHAARTYAPARSSARQSTAPAAACHARRPSTSA 416
TGT+ A T A RSSA Q + A C RRP++SA
Sbjct: 391 TGTQRSRAAT-AAVRSSAIQRSKATAVCTRRRPTSSA 426
>03_01_0455 +
3487354-3488090,3489172-3489255,3489942-3490554,
3491356-3491583,3492270-3492437,3492828-3494587,
3494667-3494670
Length = 1197
Score = 31.5 bits (68), Expect = 0.42
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 327 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATR----SRRDSGT 461
ART P S A ST PAAA +RP A + R +RD GT
Sbjct: 38 ARTMPPPSSQAATSTPPAAATPLQRPPAQATAQPSTQRYYVGVQRDKGT 86
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 359 PPIYRPRCRLSRTPPLHLSPYITQCNPLSSRLWYTSLLRPFCKKILRRXSPVT 517
PP P + PP H NPLSS+LW +S L P + L + P T
Sbjct: 40 PPPPSPVPSPAPPPPPHRPSPSPPPNPLSSKLWLSSKLSPPPPETLEQPEPST 92
>07_03_1003 +
23239829-23240121,23240257-23240349,23240785-23240993,
23241585-23241729,23241809-23241881,23242165-23242311,
23242411-23242536,23242653-23242712
Length = 381
Score = 30.7 bits (66), Expect = 0.74
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 312 TRAHAARTYAPARSSARQSTAPAA-ACHARRPSTSARTSHNATRSRRDSG 458
T AAR SAR+ TAP+A A A P++SAR + R+R SG
Sbjct: 3 TSGAAARPPVATTLSARRGTAPSATAAAASCPASSARRTTWRPRARLSSG 52
>03_06_0680 - 35497868-35497884,35498058-35501961
Length = 1306
Score = 30.7 bits (66), Expect = 0.74
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +2
Query: 80 LKTFSFYKSLK-LTVR*AHHNRPRFLIKYRHLDLSQ--LRLLPINIMYNYPGVESRNLAA 250
L+ S Y+S++ L + +P++L R+LDLS+ ++ LP +I Y +++ NL
Sbjct: 579 LQNLSKYRSVRALKIWGRSFLKPKYLHHLRYLDLSESKIKALPEDISILY-HLQTLNLCR 637
Query: 251 CPCRLSLI--FHRIQSMQGLHRHPC 319
C C L + +++ L+ H C
Sbjct: 638 CYCLRGLPKGMRYLTTLRHLYLHGC 662
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 0.98
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 106 SEIDSPVGTPQPPAIPNQVSPPGPIP 183
S + P P PP++PN++ PP P P
Sbjct: 631 SVLPPPPPPPPPPSLPNRLVPPPPAP 656
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLP 222
P P PP +PN+ PP P P N + P
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPP 636
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQL 219
P P PP P +PPGP PT+ H +L
Sbjct: 146 PKAAPPPPPPPPPHAPPGPPPTKGVATPHAKKL 178
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 40 QYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPI 180
+Y + +T V F LQ +ID TP PP P V PP +
Sbjct: 116 EYLRDDCLTIVCDLTVFMELQTEDIDVDTATPPPPPPPTVVVPPSDL 162
>12_02_1009 + 25268666-25269295
Length = 209
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 294 CRVCTGT---RAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
CR +G A AAR A ++AR S A+ + PS+S+ + A + R G R
Sbjct: 71 CRAASGAGKVAALAARLAAANATAARASVEAASRALEQNPSSSSNGTAAAAAAARRQGMR 130
Query: 465 LC 470
C
Sbjct: 131 SC 132
>09_02_0121 +
4502628-4502696,4503727-4503829,4504205-4504328,
4505963-4506306,4506383-4506487,4507907-4508288,
4509173-4509437,4509936-4510094,4511150-4511201,
4511266-4511462,4512865-4513350,4513797-4514093
Length = 860
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 94 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLP 222
F+ S +P+ TP P A+PN V P P Q F QH LP
Sbjct: 608 FVLPSVGSTPLATPTPGAVPNSVGIPQQ-PLQLF-RQHLGVLP 648
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 16 EEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 189
EE + P + P ++ S++FF LQE+ + VG+ + P Q P P Q
Sbjct: 408 EEDSDMESDEPAKTPQKKIYVSKSFFILQETAVS--VGSNKSATKPGQEEPKTPASNQ 463
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 118 SPVGTPQPPAI-PNQVSPPGPIPTQTFTNQHYVQLPGG 228
+P G P P+I P + P G +P Q T Q+ + LP G
Sbjct: 1413 APAGVPYFPSIAPTLLGPAGALPAQ-HTRQYAINLPEG 1449
>05_02_0006 - 5541290-5541961
Length = 223
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 339 APARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYARSAKR 491
+P S++R S PAA+ RP++SA H+ R+R D GT L R ++
Sbjct: 138 SPGSSASRSS--PAAS--QGRPTSSAVPPHSLARARVDKGTDLEEGRKGEK 184
>03_03_0217 + 15500943-15502196
Length = 417
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = +3
Query: 348 RSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYARSAKRY 494
R S TAPAAA R S ++RT A SRR S L A S RY
Sbjct: 277 RRSVSAVTAPAAASSGRWASAASRTMSAARPSRRWSA--LLRALSGPRY 323
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 118 SPVGTPQPPAIPNQVSPPGPIP 183
+P +P PP P+ PPGP P
Sbjct: 51 APQSSPAPPPAPDMTPPPGPGP 72
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 118 SPVGTPQPPAIPNQVSPPGPIP 183
+P TP PPAIP PP P P
Sbjct: 21 APQATP-PPAIPESGPPPPPAP 41
>08_02_1351 +
26318023-26318665,26319386-26319543,26320843-26320930,
26321953-26322185
Length = 373
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 IGSQNFFFL--QESEIDSPVGTPQPPAIPNQVSPPGPIPT 186
IG + F+FL S S PP IP Q+ PP + T
Sbjct: 107 IGDKKFYFLLPTRSIFASAAAARHPPIIPQQMPPPSYVRT 146
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 315 RAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATR 440
R+ AAR A RS A +PAAA R T AR A R
Sbjct: 37 RSRAARATARWRSRAAAQGSPAAAARRRSRGTQARRPPAAAR 78
>05_01_0462 -
3658153-3658290,3658394-3658540,3658622-3658720,
3658802-3659253,3659597-3660280,3662072-3662180
Length = 542
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +3
Query: 324 AARTYAPARSSARQSTAP---AAACHARRPSTSARTSHNATRSRR 449
AA +Y PA S+A S P AA H R P + + RSRR
Sbjct: 347 AAPSYPPATSAASSSVQPFHAEAAAHLRHPRHVSVGGSGSARSRR 391
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 345 ARSSARQSTAPAAACHARRPSTSARTSHNATRSRRD 452
A SA QST +A+ RR STS H ++ SR +
Sbjct: 2049 ASGSAAQSTKQSASGQKRRSSTSEAEQHGSSTSRHN 2084
>01_07_0084 + 40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 306 TGTRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
TG A R APAR++ + AP+ + H P+ +A ++H+ + +S
Sbjct: 1002 TGRNATPDRWAAPARTTNSFNAAPSNSNHVTYPNQNAYSNHSTQATTYNS 1051
>11_08_0008 +
27591454-27592154,27595078-27595253,27595774-27595968,
27598124-27599184
Length = 710
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 301 TLHALDAVENEAE--AAWACCQVPGLYPRVIVHNVDW 197
T +LD ++ + CCQVP + P + V N+ W
Sbjct: 173 TCASLDKAAHDGDPCTGLGCCQVPSIPPNLSVLNISW 209
>03_05_0267 - 22538631-22539452
Length = 273
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 303 CTGTRAHAARTYAPARSSARQSTAPAAACHARRPSTS 413
C+ + A+ + +PAR+S S++P+ C ARRP+ S
Sbjct: 183 CSPSSPPASPSPSPARTSP-PSSSPSRGCSARRPTPS 218
>11_01_0098 - 724413-724449,725200-725690
Length = 175
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 312 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCY 473
T++ AAR S A + P A C STSA S + SRR +G R+ +
Sbjct: 115 TQSSAARMTTMLASKAPELPLPPACCMEAGVSTSAGAS-TTSPSRRMAGCRMIF 167
>07_03_1512 +
27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 158 KYRHLDLSQLRLLPINIMYNYPGVESRNLAACPCRLSLIFHRIQSMQGLHRHPCPCRPY 334
KY + L+Q+ L I I+ +YP V +L P + + F RI + G +P RPY
Sbjct: 791 KYHGVFLNQVALQEIPIVQDYPDVFPEDLLGMPPKRDIEF-RIDLVPG--TNPIHKRPY 846
>07_03_1330 + 25848372-25849157
Length = 261
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 342 PARSSARQSTAPAAACHARRPSTSARTSHNATRSRR 449
PA +SA ST+ + + PSTS SH+ATR R
Sbjct: 222 PANTSATASTSRPSTSTSS-PSTSTSASHSATRRGR 256
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 112 IDSPVGTPQPPAIPNQVSPPGPIPTQTFT 198
I +P +P P P+ +PP P PT T T
Sbjct: 220 IATPPPSPASPPPPSTATPPPPSPTPTTT 248
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 130 TPQPPAIPNQ-VSPPGPIPTQTFT 198
+P PP IP V PP P+P T T
Sbjct: 251 SPTPPPIPTATVRPPPPLPRATVT 274
>06_03_1280 - 28930959-28931540
Length = 193
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 327 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYARSAKR 491
AR A A SS ++ A H +PS+S +S A + CY +A R
Sbjct: 109 ARKGAAAASSPVEALFTAGIHHPPQPSSSCSSSKPAAAAASSGSPERCYLAAAAR 163
>04_03_1022 - 21778315-21779007
Length = 230
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTF 195
P P PP +P + PP P P Q +
Sbjct: 39 PPPPPPPPYVPPHLLPPSPAPQQWY 63
>03_02_0463 -
8673313-8673639,8674040-8674126,8674710-8674790,
8674896-8675048,8675129-8675185,8675293-8675569,
8675634-8675749,8676372-8676523,8676627-8676816,
8676935-8677345
Length = 616
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 324 AARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
AA T+ P+R +AR +T AAA R + +A + R+ R G R
Sbjct: 5 AAATFTPSRLAARPATPAAAAAPVR--ARAAVAAGGRRRTSRRGGVR 49
>12_01_0182 + 1345209-1347065
Length = 618
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +2
Query: 221 PGVESRNLAACPCRLSLIFHRIQSMQGLHRHPCPCRPYLRTRTVLCPPIYRPRCRLSRTP 400
P + R+ P RL H + GL RH LR + L P +R R LS
Sbjct: 34 PALRRRDALPLPARLFAQLHALVLTAGLARHSPNFSLLLRLASPLLPVSHRLRLLLSSPL 93
Query: 401 P 403
P
Sbjct: 94 P 94
>10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869
Length = 526
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 133 PQPPAIPNQVSPPGPIPT 186
P PP P +SPP P+PT
Sbjct: 15 PPPPQEPAPLSPPPPLPT 32
>10_02_0099 - 5295513-5296400
Length = 295
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 321 HAARTYAPARSSARQSTAPAAACHARRPSTSA 416
H +R+ + + + ++APAAA HA++ +T+A
Sbjct: 165 HLSRSSSKPPTPTKTASAPAAADHAKKANTAA 196
>07_03_1160 - 24430240-24431268
Length = 342
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 46 PQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIP 183
P P+ + GS N + + S P P+IPNQ PP PIP
Sbjct: 192 PDMLPMPKPDGSPNSYAPSVPD-QSTQPNPNGPSIPNQ--PPQPIP 234
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFT 198
P P PP P+ S P P PT T T
Sbjct: 119 PAAAP-PPTAPSPYSAPSPTPTPTHT 143
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 118 SPVGTPQPPAIPNQVSPPGPIPTQT 192
SP P PP P Q +PP P P ++
Sbjct: 48 SPPRPPPPPPPPTQPAPPPPPPARS 72
>04_01_0406 - 5345149-5345935,5346302-5346339
Length = 274
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3
Query: 309 GTRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRR 449
GT+ HAAR APAR + STA ++ S S SH T S+R
Sbjct: 131 GTK-HAARVMAPARRGSIISTASLSS------SVSGTASHAYTTSKR 170
>01_06_0044 - 25922298-25923434
Length = 378
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +2
Query: 230 ESRNLAACPCRLSLIFHRIQSMQGLHRHPCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLH 409
++ A+ L+L+ G + C PYL + + R RCR+ +
Sbjct: 90 DTAGAASIATSLALVPPATPINHGANHSACIFGPYLPLSSRRSLIVLRRRCRVIGHQD-Y 148
Query: 410 LSPYITQCNPLSSRLW 457
L +T CNP+S W
Sbjct: 149 LHSGLTVCNPVSGERW 164
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 49 QQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGG 228
+ R + E +G Q+ FFL + S +P P + P + P P + QLP G
Sbjct: 217 RMRHMFESLGYQSGFFLSQLFSSSRGTSPSPSSFPLKQQQPPPPQLFNWPGHAPPQLPPG 276
>09_04_0249 + 16070331-16070828
Length = 165
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 351 SSARQSTAPAAACHARRPSTSARTSHNATR 440
SS+R S P+ C A STSAR+SH R
Sbjct: 18 SSSRISRTPSG-CSASAGSTSARSSHGGGR 46
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVS---PP--GPIPTQTFTNQHYVQLPG 225
P+G P PP P QV PP G +P + +Q PG
Sbjct: 80 PLGAPPPPPPPQQVQVQVPPQYGGVPNPGYPMAQQMQPPG 119
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +1
Query: 139 PPAIPNQVSPPG----PIPTQTFTNQHYVQLPGG 228
PP +P+Q PP P+P + N H V PGG
Sbjct: 176 PPPLPSQRPPPSRSPPPLPPE---NDHKVDTPGG 206
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 336 YAPARSSARQSTAPAAACHARRPSTSARTS 425
YAP+ S + AA +AR PST A T+
Sbjct: 233 YAPSAGSTSSFSVAAAEAYARPPSTPAITA 262
>02_02_0343 + 9163976-9165220
Length = 414
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 245 AACPCRLSLI--FHRIQSMQGLHRHPCP 322
A CP LSL H I S+Q LH + CP
Sbjct: 341 ADCPSLLSLPDGLHHISSLQKLHIYNCP 368
>01_02_0036 +
10468636-10468938,10469014-10469109,10469247-10469453,
10470762-10471097,10471469-10471582,10471634-10471639
Length = 353
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 339 APARSSARQSTAPAAACHARRPSTSARTSHNA 434
APAR + Q A AA R+P S R A
Sbjct: 281 APARENGEQQAAAAAELPCRKPRVSVRARSEA 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,802,545
Number of Sequences: 37544
Number of extensions: 265901
Number of successful extensions: 1736
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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