Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C03f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 27 0.50
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 25 1.2
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 1.2
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 1.5
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 24 2.7
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 24 3.6
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 23 8.2
AY062208-1|AAL58569.1| 503|Anopheles gambiae cytochrome P450 CY... 23 8.2
AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450 pr... 23 8.2
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 8.2
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 8.2
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 26.6 bits (56), Expect = 0.50
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Frame = +1
Query: 106 SEIDSPVGTPQPPAIPNQVSPP-------GPIPTQTFTNQHYVQ 216
S + SP G+ +P+Q PP GPIP+Q QH Q
Sbjct: 216 STLSSPSGSRMEYLLPHQQHPPGAGVQGAGPIPSQQKHQQHQQQ 259
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 25.4 bits (53), Expect = 1.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 404 LHLSPYITQCNPLSSRLWYT 463
+ L Y C PLSSR W T
Sbjct: 202 ISLERYFAICRPLSSRRWQT 221
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.4 bits (53), Expect = 1.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 124 VGTPQPPAIPNQVSPPG 174
+GTP PP P V P G
Sbjct: 145 LGTPGPPGYPGDVGPKG 161
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 25.0 bits (52), Expect = 1.5
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = +1
Query: 88 FFFLQESEIDSPVGTP-----QPPAIPNQVSPPGPIPT 186
FF L +++ P G P QPP P P GP P+
Sbjct: 559 FFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPS 596
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 24.2 bits (50), Expect = 2.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 425 TQCNPLSSRLWYTSL 469
TQCNPLS+ L+ T L
Sbjct: 28 TQCNPLSTYLYRTIL 42
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 23.8 bits (49), Expect = 3.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 318 AHAARTYAPARSSARQS-TAPAAACHARRPSTSARTSHNATRS 443
A AA A ++A + TAPAA + + +A T+H AT S
Sbjct: 198 AFAATNAASVATAAPAAITAPAANAASTAAAPAAATAHAATAS 240
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 22.6 bits (46), Expect = 8.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2
Query: 83 KTFSFYKSLKLT----VR*AHHNRPRFLIKYRHLDLSQLRLLPINIMYNYP 223
+T S Y +L +T V H R R L Y L + +L +I+YN P
Sbjct: 174 QTASAYLTLTVTLERYVAVCHPLRARALCTYGRARLYVVGILVFSILYNLP 224
>AY062208-1|AAL58569.1| 503|Anopheles gambiae cytochrome P450
CYP6M1 protein.
Length = 503
Score = 22.6 bits (46), Expect = 8.2
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = +3
Query: 441 SRRDSGTRLCYARSAKRYFAGFR 509
S +D+GT++ + +RY+A ++
Sbjct: 46 SFKDAGTKIHFTEEVERYYAIYK 68
>AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 22.6 bits (46), Expect = 8.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 521 YRSRAKXGEVSFCRTGVTETCTRVA 447
YRS A+ + C +TET RVA
Sbjct: 224 YRSVARKLRLKVCSRELTETVERVA 248
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P P P + PPGP
Sbjct: 628 GEPGPKGEPGLLGPPGP 644
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 22.6 bits (46), Expect = 8.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 312 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
+R+ +A + S +S + A+ R S S S + +RSR SG+R
Sbjct: 1134 SRSQSAGSRKSGSRSRSRSGSQASRGSRRSRSRSRSRSGSRSRSRSGSGSR 1184
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,945
Number of Sequences: 2352
Number of extensions: 10582
Number of successful extensions: 41
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -