Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa s... 36 0.086
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 36 0.086
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 36 0.086
BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix... 36 0.086
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 36 0.086
BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix... 36 0.086
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 36 0.086
BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix... 36 0.086
BC009067-1|AAH09067.1| 465|Homo sapiens SMARCC2 protein protein. 36 0.086
BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein. 36 0.086
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 36 0.086
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 36 0.086
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 36 0.086
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 36 0.086
AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related matrix-... 36 0.086
AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related matrix-... 36 0.086
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 33 0.61
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 33 0.61
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 33 0.61
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 33 0.61
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 33 0.61
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 33 0.61
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 33 0.61
BC051877-1|AAH51877.1| 557|Homo sapiens ariadne homolog, ubiqui... 33 0.80
AJ243190-1|CAB45870.1| 557|Homo sapiens UbcH 7-binding protein ... 33 0.80
AJ130976-1|CAA10274.1| 463|Homo sapiens Ariadne protein (ARI) p... 33 0.80
AF072832-1|AAD28088.1| 557|Homo sapiens UbcH 7-binding protein ... 33 0.80
AB209432-1|BAD92669.1| 526|Homo sapiens Ariadne-1 protein homol... 33 0.80
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 32 1.4
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 32 1.4
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 32 1.4
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 1.9
BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein. 31 2.4
BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein. 31 2.4
BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog (Drosop... 31 2.4
BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein. 31 2.4
AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein. 31 2.4
AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog (Drosop... 31 2.4
AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog (Drosop... 31 2.4
AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog (Drosop... 31 2.4
AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog (Drosop... 31 2.4
AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens ... 31 2.4
AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein. 31 2.4
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 31 3.2
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 31 3.2
AC107069-1|AAX93111.1| 538|Homo sapiens unknown protein. 31 3.2
Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein. 30 4.3
AJ315949-1|CAC51389.1| 231|Homo sapiens hypothetical protein pr... 30 4.3
Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate 5-... 30 5.7
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein. 30 5.7
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 30 5.7
AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation ... 30 5.7
AK024718-1|BAB14973.1| 196|Homo sapiens protein ( Homo sapiens ... 29 7.5
AJ310567-1|CAC83946.1| 1544|Homo sapiens phosphoinositide-bindin... 29 7.5
AF086645-1|AAF15947.1| 755|Homo sapiens metastasis suppressor p... 29 7.5
U91329-1|AAC52117.1| 1103|Homo sapiens kinesin-like motor protei... 29 9.9
U89336-8|AAB47496.1| 200|Homo sapiens NG5 protein. 29 9.9
BX284686-2|CAM26210.1| 306|Homo sapiens proline-rich transmembr... 29 9.9
BC071649-1|AAH71649.1| 251|Homo sapiens TAF9B RNA polymerase II... 29 9.9
BC063046-1|AAH63046.1| 306|Homo sapiens proline-rich transmembr... 29 9.9
BC034993-1|AAH34993.1| 1103|Homo sapiens kinesin family member 1... 29 9.9
BC033039-1|AAH33039.1| 927|Homo sapiens LGR4 protein protein. 29 9.9
BC010350-1|AAH10350.1| 251|Homo sapiens TAF9B RNA polymerase II... 29 9.9
BC009566-1|AAH09566.1| 251|Homo sapiens TAF9B RNA polymerase II... 29 9.9
AL845464-1|CAI41794.2| 306|Homo sapiens proline-rich transmembr... 29 9.9
AL662884-7|CAI18339.2| 306|Homo sapiens proline-rich transmembr... 29 9.9
AL662828-7|CAI17422.2| 306|Homo sapiens proline-rich transmembr... 29 9.9
AL049589-2|CAI42952.1| 251|Homo sapiens TAF9B RNA polymerase II... 29 9.9
AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF220509-1|AAG09711.1| 251|Homo sapiens transcription associate... 29 9.9
AB209743-1|BAD92980.1| 1032|Homo sapiens Leucine-rich repeat-con... 29 9.9
AB014606-1|BAA31681.2| 1123|Homo sapiens KIAA0706 protein protein. 29 9.9
>U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa
subunit protein.
Length = 1213
Score = 35.9 bits (79), Expect = 0.086
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
P G PQP A+P V PPGP F NQ
Sbjct: 1027 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1054
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 94 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 135
>BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 35.9 bits (79), Expect = 0.086
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
P G PQP A+P V PPGP F NQ
Sbjct: 1058 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1085
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1214
Score = 35.9 bits (79), Expect = 0.086
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
P G PQP A+P V PPGP F NQ
Sbjct: 1027 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1054
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 35.9 bits (79), Expect = 0.086
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
P G PQP A+P V PPGP F NQ
Sbjct: 1058 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1085
>BC009067-1|AAH09067.1| 465|Homo sapiens SMARCC2 protein protein.
Length = 465
Score = 35.9 bits (79), Expect = 0.086
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
P G PQP A+P V PPGP F NQ
Sbjct: 278 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 305
>BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 186 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 227
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 455
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.086
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
P G PQP A+P V PPGP F NQ
Sbjct: 1062 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1089
>AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1164
Score = 35.9 bits (79), Expect = 0.086
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
P G PQP A+P V PPGP F NQ
Sbjct: 1070 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1097
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 330 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 464
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 108 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 152
>BC051877-1|AAH51877.1| 557|Homo sapiens ariadne homolog,
ubiquitin-conjugating enzyme E2 binding protein, 1
(Drosophila protein.
Length = 557
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 381 AACHARRPSTSARTSHNATR-SRRDSGTRLCYARSAKRYFAG 503
A CH PS +RT TR S +D ++CY YF G
Sbjct: 159 AECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTG 200
>AJ243190-1|CAB45870.1| 557|Homo sapiens UbcH 7-binding protein
protein.
Length = 557
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 381 AACHARRPSTSARTSHNATR-SRRDSGTRLCYARSAKRYFAG 503
A CH PS +RT TR S +D ++CY YF G
Sbjct: 159 AECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTG 200
>AJ130976-1|CAA10274.1| 463|Homo sapiens Ariadne protein (ARI)
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 381 AACHARRPSTSARTSHNATR-SRRDSGTRLCYARSAKRYFAG 503
A CH PS +RT TR S +D ++CY YF G
Sbjct: 65 AECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTG 106
>AF072832-1|AAD28088.1| 557|Homo sapiens UbcH 7-binding protein
protein.
Length = 557
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 381 AACHARRPSTSARTSHNATR-SRRDSGTRLCYARSAKRYFAG 503
A CH PS +RT TR S +D ++CY YF G
Sbjct: 159 AECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTG 200
>AB209432-1|BAD92669.1| 526|Homo sapiens Ariadne-1 protein homolog
variant protein.
Length = 526
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 381 AACHARRPSTSARTSHNATR-SRRDSGTRLCYARSAKRYFAG 503
A CH PS +RT TR S +D ++CY YF G
Sbjct: 128 AECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTG 169
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Frame = +1
Query: 130 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 204
TP+PP PNQ PPGP +PT N+
Sbjct: 647 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 676
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Frame = +1
Query: 130 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 204
TP+PP PNQ PPGP +PT N+
Sbjct: 724 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 753
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Frame = +1
Query: 130 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 204
TP+PP PNQ PPGP +PT N+
Sbjct: 724 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 753
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 46 PQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPP 171
P++ P++ S F L+ES + P +P PA+ +SPP
Sbjct: 498 PEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPP 539
>BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 34 AQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 189
AQQ +P T+ +G+ Q+ + SP P P P Q PG IP Q
Sbjct: 382 AQQPGPAKPPTQQVGTPKPL-AQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 432
>BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 34 AQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 189
AQQ +P T+ +G+ Q+ + SP P P P Q PG IP Q
Sbjct: 382 AQQPGPAKPPTQQVGTPKPL-AQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 432
>BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 591
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein.
Length = 527
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 304 PPPPPPPPPLPNQVPPPPPPP 324
>AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein.
Length = 570
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 594 PPPPPPPPPLPNQVPPPPPPP 614
>AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 594 PPPPPPPPPLPNQVPPPPPPP 614
>AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ38927 fis, clone NT2NE2012505, highly similar to
Gallus gallus mRNA for avena. ).
Length = 467
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 244 PPPPPPPPPLPNQVPPPPPPP 264
>AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein.
Length = 591
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3
chain protein.
Length = 1670
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGP 177
P G P PP P V PPGP
Sbjct: 181 PQGLPGPPGFPGPVGPPGP 199
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGP 177
P G P PP P V PPGP
Sbjct: 181 PQGLPGPPGFPGPVGPPGP 199
>AC107069-1|AAX93111.1| 538|Homo sapiens unknown protein.
Length = 538
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGP 177
P G P PP P V PPGP
Sbjct: 133 PQGLPGPPGFPGPVGPPGP 151
>Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein.
Length = 759
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 34 AQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
AQQ +P T+ +G+ Q+ + SP P P P Q PP P T
Sbjct: 366 AQQPGPAKPPTQQVGTPKPL-AQQPGLQSPAKAPGPTKTPAQTKPPSQQPGST 417
>AJ315949-1|CAC51389.1| 231|Homo sapiens hypothetical protein
protein.
Length = 231
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 314 PCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHL--SPYITQCNPLSSR 451
P P L T L PP RP LS PPL L SP ++ C+P SR
Sbjct: 120 PAAPPPALPGPTPLPPPSPRPSPPLSPRPPLLLGCSPTLSLCSPPYSR 167
>Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate
5-phosphatase protein.
Length = 1258
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGPIPTQTFTNQ 204
G P P A P PPGP P TF +
Sbjct: 1087 GPPPPKAHPRPPLPPGPSPASTFLGE 1112
>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
Length = 1149
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGPIPTQTFTNQ 204
G P P A P PPGP P TF +
Sbjct: 1023 GPPPPKAHPRPPLPPGPSPASTFLGE 1048
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +3
Query: 312 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRR-----DSGTRLCYA 476
TRA +ARTYAPA S+ R + A R ++ +R + +RR SGTR+ A
Sbjct: 621 TRA-SARTYAPACSARRGAPARRRGARVRNATSRSRWWTSLREARRWWCAAPSGTRMTTA 679
Query: 477 RSA 485
+A
Sbjct: 680 PTA 682
>AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 3 variant protein.
Length = 1780
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 55 RPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQH 207
+ ITE I S I P TP PP +P+QV P+ T + H
Sbjct: 348 KDITEEIMSGGGSRNPTPPIGRPTSTPTPPQLPSQVPEHSPVVYGTVESAH 398
>AK024718-1|BAB14973.1| 196|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21065 fis, clone CAS01339. ).
Length = 196
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 46 PQQRPITE--VIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
PQ R E ++ + L++ E + +G+P P+ P SP G +PTQT
Sbjct: 127 PQARGSLEEQLLQELSSLILRKGETTAGLGSPSQPSSPQSPSPTG-LPTQT 176
>AJ310567-1|CAC83946.1| 1544|Homo sapiens phosphoinositide-binding
proteins protein.
Length = 1544
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 46 PQQRPITE--VIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
PQ R E ++ + L++ E + +G+P P+ P SP G +PTQT
Sbjct: 1475 PQARGSLEEQLLQELSSLILRKGETTAGLGSPSQPSSPQSPSPTG-LPTQT 1524
>AF086645-1|AAF15947.1| 755|Homo sapiens metastasis suppressor
protein protein.
Length = 755
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 22 HAYFAQQYPQQRPIT-EVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVS 165
+ Y + QQ P+ + S + F+ + S +P PP PNQ+S
Sbjct: 299 YRYRSSNLAQQAPVRLSSVSSHDSGFISQDAFQSKSPSPMPPEAPNQLS 347
>U91329-1|AAC52117.1| 1103|Homo sapiens kinesin-like motor protein
KIF1C protein.
Length = 1103
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +3
Query: 339 APARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYARSAKRYFAGFRP 512
AP + P A ARRP S R SH+ R+ D G R A SA+ F+P
Sbjct: 999 APTPLQPPEEVTPHPATPARRPP-SPRRSHHPRRNSLDGGGRSRGAGSAQPEPQHFQP 1055
>U89336-8|AAB47496.1| 200|Homo sapiens NG5 protein.
Length = 200
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 94 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
+LQE+ + P+ P PP P +PP P P QT
Sbjct: 6 YLQETRFEGPL--PPPP--PAAAAPPPPAPAQT 34
>BX284686-2|CAM26210.1| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 94 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
+LQE+ + P+ P PP P +PP P P QT
Sbjct: 112 YLQETRFEGPL--PPPP--PAAAAPPPPAPAQT 140
>BC071649-1|AAH71649.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 124 VGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
+ TPQ ++PN+V+ P + +Q FT Q
Sbjct: 160 IATPQTVSVPNKVATPMSVTSQRFTVQ 186
>BC063046-1|AAH63046.1| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 94 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
+LQE+ + P+ P PP P +PP P P QT
Sbjct: 112 YLQETRFEGPL--PPPP--PAAAAPPPPAPAQT 140
>BC034993-1|AAH34993.1| 1103|Homo sapiens kinesin family member 1C
protein.
Length = 1103
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +3
Query: 339 APARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYARSAKRYFAGFRP 512
AP + P A ARRP S R SH+ R+ D G R A SA+ F+P
Sbjct: 999 APTPLQPPEEVTPHPATPARRPP-SPRRSHHPRRNSLDGGGRSRGAGSAQPEPQHFQP 1055
>BC033039-1|AAH33039.1| 927|Homo sapiens LGR4 protein protein.
Length = 927
Score = 29.1 bits (62), Expect = 9.9
Identities = 26/87 (29%), Positives = 39/87 (44%)
Frame = +2
Query: 20 NMPTLHNSILNKDPSQKL*ALKTFSFYKSLKLTVR*AHHNRPRFLIKYRHLDLSQLRLLP 199
N+PTL L + K+ ++ F+F L V H+N+ R L ++ L L L
Sbjct: 151 NLPTLQALTLALN---KISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLD 207
Query: 200 INIMYNYPGVESRNLAACPCRLSLIFH 280
+N YN G + + A P L FH
Sbjct: 208 LN--YNNLGEFPQAIKALPSLKELGFH 232
>BC010350-1|AAH10350.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 124 VGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
+ TPQ ++PN+V+ P + +Q FT Q
Sbjct: 160 IATPQTVSVPNKVATPMSVTSQRFTVQ 186
>BC009566-1|AAH09566.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 124 VGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
+ TPQ ++PN+V+ P + +Q FT Q
Sbjct: 160 IATPQTVSVPNKVATPMSVTSQRFTVQ 186
>AL845464-1|CAI41794.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 94 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
+LQE+ + P+ P PP P +PP P P QT
Sbjct: 112 YLQETRFEGPL--PPPP--PAAAAPPPPAPAQT 140
>AL662884-7|CAI18339.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 94 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
+LQE+ + P+ P PP P +PP P P QT
Sbjct: 112 YLQETRFEGPL--PPPP--PAAAAPPPPAPAQT 140
>AL662828-7|CAI17422.2| 306|Homo sapiens proline-rich transmembrane
protein 1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 94 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
+LQE+ + P+ P PP P +PP P P QT
Sbjct: 112 YLQETRFEGPL--PPPP--PAAAAPPPPAPAQT 140
>AL049589-2|CAI42952.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding proteinctase M2 polypeptide (RRM2)
protein.
Length = 251
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 124 VGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
+ TPQ ++PN+V+ P + +Q FT Q
Sbjct: 160 IATPQTVSVPNKVATPMSVTSQRFTVQ 186
>AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ30323 fis, clone BRACE2007109, highly similar to
Extensin-like protein NG5. ).
Length = 306
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 94 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 192
+LQE+ + P+ P PP P +PP P P QT
Sbjct: 112 YLQETRFEGPL--PPPP--PAAAAPPPPAPAQT 140
>AF220509-1|AAG09711.1| 251|Homo sapiens transcription associated
factor TAFII31L protein.
Length = 251
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 124 VGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
+ TPQ ++PN+V+ P + +Q FT Q
Sbjct: 160 IATPQTVSVPNKVATPMSVTSQRFTVQ 186
>AB209743-1|BAD92980.1| 1032|Homo sapiens Leucine-rich
repeat-containing G protein-coupled receptor 4 precursor
variant protein.
Length = 1032
Score = 29.1 bits (62), Expect = 9.9
Identities = 26/87 (29%), Positives = 39/87 (44%)
Frame = +2
Query: 20 NMPTLHNSILNKDPSQKL*ALKTFSFYKSLKLTVR*AHHNRPRFLIKYRHLDLSQLRLLP 199
N+PTL L + K+ ++ F+F L V H+N+ R L ++ L L L
Sbjct: 256 NLPTLQALTLALN---KISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLD 312
Query: 200 INIMYNYPGVESRNLAACPCRLSLIFH 280
+N YN G + + A P L FH
Sbjct: 313 LN--YNNLGEFPQAIKALPSLKELGFH 337
>AB014606-1|BAA31681.2| 1123|Homo sapiens KIAA0706 protein protein.
Length = 1123
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +3
Query: 339 APARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYARSAKRYFAGFRP 512
AP + P A ARRP S R SH+ R+ D G R A SA+ F+P
Sbjct: 1019 APTPLQPPEEVTPHPATPARRPP-SPRRSHHPRRNSLDGGGRSRGAGSAQPEPQHFQP 1075
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,234,528
Number of Sequences: 237096
Number of extensions: 1520538
Number of successful extensions: 11071
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 7205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10880
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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