Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 32 0.29
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 31 0.66
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 30 1.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 2.0
U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical pr... 29 2.7
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 2.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 2.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 2.7
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 28 3.5
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 28 4.7
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z68336-6|CAE17801.1| 204|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 4.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 4.7
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 4.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 4.7
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 28 4.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 27 6.2
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 27 8.1
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 27 8.1
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 27 8.1
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 27 8.1
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 27 8.1
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41994-3|AAO91712.1| 251|Caenorhabditis elegans Rnase h protein... 27 8.1
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 27 8.1
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 27 8.1
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 27 8.1
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 27 8.1
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 27 8.1
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 27 8.1
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 31.9 bits (69), Expect = 0.29
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 97 LQESEIDSPVGTPQPPAIPNQVSP--PGPIPTQTFTNQHYVQLPGGRV 234
L+ +++ +G P P +P ++P GP T+ H LPGG++
Sbjct: 43 LKTAQLHKKLGKPVPEDVPTIIAPGADGPTETKAKPKWHQQALPGGKI 90
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 30.7 bits (66), Expect = 0.66
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 10 RHEEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSP-PGPIPT 186
+ ++H +AQ QQ+ + + + + Q+ + P QP ++P Q P P
Sbjct: 492 QQQQHPMYAQYQQQQQQHAQHQQNMSGYPQQQQQPQHPHQHQQPASVPMQHHPQQHPSQH 551
Query: 187 QTFTNQHYVQLPGG 228
QT NQ Q P G
Sbjct: 552 QTQPNQQQQQHPSG 565
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 46 PQQRPITEV-IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPT 186
P+ P+ + +G+ NF L + I S + P P P VS P P+ T
Sbjct: 526 PKPAPVQPISLGNINFVALAQQLIASGIKLPLPIVTPPVVSTPAPVIT 573
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 46 PQQRPITEV-IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPT 186
P+ P+ + +G+ NF L + I S + P P P VS P P+ T
Sbjct: 526 PKPAPVQPISLGNINFVALAQQLIASGIKLPLPIVTPPVVSTPAPVIT 573
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 100 QESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 189
+ES D P GT P P Q PP P P Q
Sbjct: 211 EESLDDKPSGTKMPAQPPPQQHPPPPQPQQ 240
>U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical
protein F31E8.1 protein.
Length = 249
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 91 FFLQESEIDSPVGTPQPPAIP-NQVSPPGPIPTQTFTNQHYVQLPGGRV 234
FFL+ D + P P + + SPP P P T + LP G++
Sbjct: 72 FFLRHGVTDGELLPPAPNLVTLRKESPPAPSPPSRVTPIRHSPLPAGKL 120
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGP 177
P G P PP P PPGP
Sbjct: 230 PAGPPGPPGAPGNDGPPGP 248
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 112 IDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQ 204
+ +PV P P IP V PP P T T + Q
Sbjct: 1113 VAAPVPVPTPFTIPPPVPPPPPTATSTQSQQ 1143
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGP 177
P G P PP P PPGP
Sbjct: 230 PAGPPGPPGAPGNDGPPGP 248
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 91 FFLQESEIDSPVGTPQPPAIPNQVSPPGPIP 183
FFLQ + P+ T PP PN PP P P
Sbjct: 811 FFLQYASNSQPLSTLPPPPPPN--PPPAPQP 839
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Frame = +1
Query: 19 EHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIP--NQVSPPGPIPTQT 192
EH Y PQQ+ ++ Q+ Q I P P +IP S GP Q
Sbjct: 163 EHQYPMHLQPQQQTLSRPGSQQSQHIQQPGSIQRPGSVLAPGSIPPGGPASQTGPQSIQV 222
Query: 193 FTNQHYVQLPG 225
F VQ PG
Sbjct: 223 F-GPGSVQPPG 232
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGP 177
P G P PP P PPGP
Sbjct: 228 PPGPPGPPGAPGNDGPPGP 246
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Frame = +1
Query: 43 YPQQRPITEVIGS--QNFFFLQE---SEIDSPVGTPQPPAIPNQVSPPGP 177
YP+ P + +I Q+F L E E P+ P PP P Q GP
Sbjct: 70 YPRDHPFSSIIRQKRQSFASLPEWCQCEPTKPICPPGPPGQPGQQGQKGP 119
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 73 IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTN 201
I QN LQ + SP P P V PP P P T N
Sbjct: 493 IEQQNQLMLQHHQFSSPPAAPPPSQQQQVVQPPIP-PAPTTAN 534
>Z68336-6|CAE17801.1| 204|Caenorhabditis elegans Hypothetical
protein F22B3.9 protein.
Length = 204
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 100 QESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGGR 231
Q S+I + P PP + SP G HY+Q+PGG+
Sbjct: 25 QLSQIRISLDPPSPPFL--SPSPLGDYRVNDEPRMHYLQVPGGQ 66
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 103 ESEIDSPVGTPQPPAIPNQVSPPGPIPT 186
ES I S + TP P P S P P+P+
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVPS 1256
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 103 ESEIDSPVGTPQPPAIPNQVSPPGPIPT 186
ES I S + TP P P S P P+P+
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVPS 1256
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGP 177
P G P PP P PPGP
Sbjct: 223 PPGPPGPPGAPGNDGPPGP 241
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 323 CRPYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQCNPLSSRLWYTSLLRPFC 484
C P + LCP RP C + L +S ++QC P +S ++ C
Sbjct: 270 CSPSCVQQYSLCPQQCRPMCTNACVTNLQVSRPVSQCLPACMPSCTSSCVQSMC 323
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGP 177
P G P PP P PPGP
Sbjct: 223 PPGPPGPPGAPGNDGPPGP 241
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 100 QESEIDSPVGTPQP-PAIPNQVSPPGPIP 183
++ + +P G P P PA+P + SP P+P
Sbjct: 140 KKDDFFAPPGAPDPVPAVPVEPSPAPPVP 168
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 118 SPVGTPQPPAIPNQVSPPGP 177
+P G P PP P PPGP
Sbjct: 222 APPGPPGPPGPPGPQGPPGP 241
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 100 QESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 189
Q+SE S TP+PP +SPP P++
Sbjct: 1146 QQSESGSKPSTPRPPRFRISMSPPRKPPSE 1175
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 76 GSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGP 177
G +NF+ S P G P PP P + P GP
Sbjct: 226 GPKNFYIT--SGPPGPPGPPGPPGNPGGIGPRGP 257
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 749 GLPGPPGMPGLAGPPGP 765
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 352 GLPGPPGMPGLAGPPGP 368
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 712 GLPGPPGMPGLAGPPGP 728
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 224 GLPGPPGMPGLAGPPGP 240
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 749 GLPGPPGMPGLAGPPGP 765
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 352 GLPGPPGMPGLAGPPGP 368
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 712 GLPGPPGMPGLAGPPGP 728
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +1
Query: 82 QNFFFLQESEIDSPVGTPQPPAI---PNQVSPPGPIPTQTFTNQH 207
Q+ + + I PVG P PP P + PPGP F H
Sbjct: 118 QSLIYQRPPCIRCPVGEPGPPGPDGEPGEQGPPGPPGVDNFEVGH 162
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 100 QESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYV----QLPGG 228
Q S+ P P A PN + P P PT T T+Q V Q+P G
Sbjct: 30 QFSQFSQPSAAPLNNAPPNYAANPFPFPTAT-TSQEPVKPVSQIPNG 75
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 327 ARTYAPARSSARQSTAPAAACHARRPSTSART-SHNATRSRRDSGT 461
+++ +PA+S+ + S +PA A + T +R+ S +ATR R S T
Sbjct: 29 SKSPSPAKSARKASKSPARARTSNVKKTPSRSASKSATRGRTASKT 74
>U41994-3|AAO91712.1| 251|Caenorhabditis elegans Rnase h protein
1.0, isoform c protein.
Length = 251
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 351 SSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYARSAK 488
+ AR+ A + +P T A ++ +ATR R GT+ A+ K
Sbjct: 44 AEARKFVADNMSVPGSKPVTPAVSTSSATRKRTHEGTKFTEAKKMK 89
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 224 GLPGPPGMPGLAGPPGP 240
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 352 GLPGPPGMPGLAGPPGP 368
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 127 GTPQPPAIPNQVSPPGP 177
G P PP +P PPGP
Sbjct: 691 GLPGPPGMPGLAGPPGP 707
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 294 CRVCTGTRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 458
CR GT + + S+ S+APA+ C R + TS +++ S SG
Sbjct: 305 CRKHFGTAKYFLIHHYYYHSTDLTSSAPASTCSTRWSPMTVSTSESSSTSESSSG 359
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 327 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRS 443
A T A A S A S A + ARRP+T+ R + A S
Sbjct: 161 AETAASASSEASTSNGVATSSSARRPATAKRDTLAAPTS 199
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 327 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRS 443
A T A A S A S A + ARRP+T+ R + A S
Sbjct: 161 AETAASASSEASTSNGVATSSSARRPATAKRDTLAAPTS 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,549,597
Number of Sequences: 27780
Number of extensions: 216435
Number of successful extensions: 1549
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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