Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307C03f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family... 33 0.088
At1g69600.1 68414.m08005 zinc finger homeobox family protein / Z... 31 0.36
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 29 1.9
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 29 2.5
At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3) ident... 29 2.5
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 29 2.5
At1g73270.1 68414.m08479 serine carboxypeptidase S10 family prot... 29 2.5
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 3.3
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 28 3.3
At5g48360.1 68418.m05975 formin homology 2 domain-containing pro... 28 4.4
At4g30820.2 68417.m04368 cyclin-dependent kinase-activating kina... 28 4.4
At4g30820.1 68417.m04367 cyclin-dependent kinase-activating kina... 28 4.4
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 28 4.4
At3g36659.1 68416.m00783 invertase/pectin methylesterase inhibit... 28 4.4
At3g21215.1 68416.m02681 RNA-binding protein, putative contains ... 28 4.4
At2g09865.1 68415.m01022 hypothetical protein 28 4.4
At5g38680.1 68418.m04677 kelch repeat-containing F-box family pr... 27 5.8
At3g48400.1 68416.m05283 DC1 domain-containing protein similar t... 27 5.8
At3g22270.1 68416.m02815 expressed protein 27 5.8
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 27 7.7
At5g59270.1 68418.m07427 lectin protein kinase family protein co... 27 7.7
At4g03120.1 68417.m00425 proline-rich family protein similar to ... 27 7.7
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 27 7.7
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 27 7.7
At3g18810.1 68416.m02389 protein kinase family protein contains ... 27 7.7
At3g09770.2 68416.m01158 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial... 27 7.7
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 27 7.7
>At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family
protein
Length = 523
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +1
Query: 46 PQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPI 180
PQQ+P E GS F LQE + D+ P P + P Q PP I
Sbjct: 160 PQQQPNDESQGSPVFVKLQEMQ-DATSSPPPPESKPGQADPPDNI 203
>At1g69600.1 68414.m08005 zinc finger homeobox family protein /
ZF-HD homeobox family protein
Length = 242
Score = 31.5 bits (68), Expect = 0.36
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +1
Query: 79 SQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQL 219
S+N FL I SP GT PP+ VS P P T H+V L
Sbjct: 84 SENLNFLTAPPISSPSGTESPPS--RHVSSPVPCSYYTSAPPHHVIL 128
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 40 QYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTN 201
QYPQQ P + + + +E P PP P PPG P+Q + N
Sbjct: 336 QYPQQPP--PQLQHPSGYNPEEPPYPQQSYPPNPPRQPPSHPPPGSAPSQQYYN 387
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +2
Query: 311 HPCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQCNPLS 445
HP P P T T + PPI R S PP H S + NP S
Sbjct: 21 HP-PSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPSS 64
>At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 514
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +2
Query: 311 HPCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQCNPLS 445
HP P P T T + PPI R S PP H S + NP S
Sbjct: 21 HP-PSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPSS 64
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +2
Query: 311 HPCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQCNPLS 445
HP P P T T + PPI R S PP H S + NP S
Sbjct: 21 HP-PSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPSS 64
>At1g73270.1 68414.m08479 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P07519) [Hordeum vulgare], glucose acyltransferase
GB:AAD01263 [Solanum berthaultii]; contains Pfam
profile: PF00450 Serine carboxypeptidase;
Length = 441
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = +2
Query: 329 PYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQC-------NPLSSRLWYTSLLRPFCK 487
PY ++ +Y R+ + H+ PY T+C N +S+L+ + +L P C+
Sbjct: 232 PYAHGMALISDELYESLKRICKGEYEHVDPYNTECLKLLEEFNECTSKLYRSHILYPLCE 291
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 109 EIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGG 228
E +PV P PP P+ SP P P N + GG
Sbjct: 96 EGSTPVTPPAPPQTPSNQSPERPTPPSPGANDDRNRTNGG 135
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 133 PQPPAIPNQVSPPGPIPTQT 192
P PP P+ SPP P PT T
Sbjct: 45 PSPPPPPSNPSPPPPSPTTT 64
>At5g48360.1 68418.m05975 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 782
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 79 SQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIP 183
S+ + ES + P+ PP P + SPP P P
Sbjct: 30 SRRLLYDYESPLPLPLSPISPPFFPLESSPPSPPP 64
>At4g30820.2 68417.m04368 cyclin-dependent kinase-activating kinase
assembly factor-related / CDK-activating kinase assembly
factor-related contains similarity to CDK-activating
kinase assembly factor MAT1 (RING finger protein MAT1)
(Menage a trois) (CDK7/cyclin H assembly factor)
(Swiss-Prot:P51950) [Marthasterias glacialis]
Length = 178
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 357 ARQSTAPAAACHARRPSTSARTSHN 431
A + TA AAC A+ P T A TS N
Sbjct: 83 AEELTAALAACKAKPPQTDADTSSN 107
>At4g30820.1 68417.m04367 cyclin-dependent kinase-activating kinase
assembly factor-related / CDK-activating kinase assembly
factor-related contains similarity to CDK-activating
kinase assembly factor MAT1 (RING finger protein MAT1)
(Menage a trois) (CDK7/cyclin H assembly factor)
(Swiss-Prot:P51950) [Marthasterias glacialis]
Length = 178
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 357 ARQSTAPAAACHARRPSTSARTSHN 431
A + TA AAC A+ P T A TS N
Sbjct: 83 AEELTAALAACKAKPPQTDADTSSN 107
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 312 TRAHAARTYAPARSSARQSTAPAA--ACHARRPSTSARTSHNATRSRRDS 455
T H R+ PA + + P A ACH RRP A T+ + + R S
Sbjct: 18 TAGHHRRSPPPATTGHHHRSPPPAITACHHRRPPLPATTAGHHRQLRPPS 67
>At3g36659.1 68416.m00783 invertase/pectin methylesterase inhibitor
family protein similar to extensin-like protein [Zea
mays] GI:5917666
Length = 264
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 103 ESEIDSPVGTPQP-PAIPNQVSPPGPIPTQTFTN 201
ES DSP TP P P + ++ P P + +T+
Sbjct: 26 ESRSDSPFSTPAPAPEVMKPIASPANSPAEIYTD 59
>At3g21215.1 68416.m02681 RNA-binding protein, putative contains RNA
recognition motif, Pfam:PF00076; contains AT-AC splice
sites at intron 8
Length = 339
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P G P PPA + +PP P P
Sbjct: 15 PAGAPPPPAAVSSAAPPHPPP 35
>At2g09865.1 68415.m01022 hypothetical protein
Length = 339
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 103 ESEIDSPVGTPQPP----AIPNQVSPPGPIPTQTFTNQHYV 213
E E PVG P+ A+P ++ P PIP + + Q Y+
Sbjct: 259 EDEFIDPVGGPRVGSSSLALPYELPSPTPIPIEPYVFQQYI 299
>At5g38680.1 68418.m04677 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 357
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 359 PPIYRPRCRLSRTPP-LHLSPYITQCNPLSSRLWYTSLLRP 478
P +Y+ R L+RT L++ Y+ NP S W+T L+P
Sbjct: 53 PELYKERSLLNRTEGCLYVCLYL---NPFESPSWFTLCLKP 90
>At3g48400.1 68416.m05283 DC1 domain-containing protein similar to
UV-B light insensitive ULI3 [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 619
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 3 PNSARGTCLLCTTVSSTKTHHRS 71
P+SA+ TCLLC VS +H S
Sbjct: 192 PDSAQKTCLLCDDVSDHLIYHCS 214
>At3g22270.1 68416.m02815 expressed protein
Length = 782
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 13 HEEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDS--PVGTPQPPAIPNQVSPPGPIP 183
H + Y YPQQ+P + S+ L ES S P G P A P + +P
Sbjct: 150 HSKPLYRTSSYPQQQPQLQHYNSEP-IILPESNFTSFPPPGNRSPQASPGNLHRAPSLP 207
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 97 LQESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 189
++ S + SP P PP I ++ P P P Q
Sbjct: 339 VEPSRVQSPSPPPPPPVIQPELPQPQPPPPQ 369
>At5g59270.1 68418.m07427 lectin protein kinase family protein
contains Pfam domains PF00139: Legume lectins beta
domain and PF00069: Protein kinase domain
Length = 668
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 61 ITEVIGSQNFF-FLQESEIDSPVGTPQPPAIPNQVSPPGPIP 183
I+E+ F L S+I P P PP+ P PP P P
Sbjct: 241 ISEIFNGTMFVESLDLSKILDPPNRPPPPSSPPPPPPPPPTP 282
>At4g03120.1 68417.m00425 proline-rich family protein similar to U1
small nuclear ribonucleoprotein C; contains proline rich
extensin domains, INTERPRO:IPR002965
Length = 207
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPG-PIP 183
P G PP +P ++PPG P+P
Sbjct: 106 PQGYMPPPGVPQMMAPPGAPLP 127
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIPT 186
PV T P+ P VSPP P PT
Sbjct: 168 PVPTDPMPSPPPPVSPPPPTPT 189
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 121 PVGTPQPPAIPNQVSPPGPIP 183
P TP PP P + PP P P
Sbjct: 65 PPQTPPPPPPPQSLPPPSPSP 85
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 115 DSPVGTPQPPAIPNQVSPPGP 177
DS G+PQPP+ +Q SPP P
Sbjct: 48 DSSNGSPQPPSSDSQ-SPPSP 67
>At3g09770.2 68416.m01158 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 341
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 133 PQPPAIPNQVSPPGPIPTQTFTN 201
P PP P+ PP P+PT+ N
Sbjct: 24 PPPPPPPSSSLPPPPLPTEIQAN 46
>At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 388
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 133 PQPPAIPNQVSPPGPIPTQTFTN 201
P PP P+ PP P+PT+ N
Sbjct: 24 PPPPPPPSSSLPPPPLPTEIQAN 46
>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
putative very strong similarity to SP|P23413 ATP
synthase alpha chain, mitochondrial (EC 3.6.3.14)
{Brassica campestris}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF00306: ATP synthase ab C terminal, PF02874:
ATP synthase alpha/beta family beta-barrel domain
Length = 777
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 109 EIDSPVGTPQPPAIPNQVSPPGPI 180
++ PV P P P+ VSPP PI
Sbjct: 153 QLTHPVPFPAEPGSPDPVSPPPPI 176
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +1
Query: 10 RHEEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIP 183
R A A Q P R T G+ Q +SP PP P SPP P P
Sbjct: 116 RRTTTAAVAGQPPHHRRTTAAAGTTTIAG-QPPPPESPPPESLPPPSPESPSPPSPEP 172
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,783,330
Number of Sequences: 28952
Number of extensions: 192343
Number of successful extensions: 1127
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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