Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307C02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   6.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.6  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 255 LRAPPEELSPPRALPAPVPQSRASVF*G 172
           ++A PE++S  R  P P        F G
Sbjct: 513 IKADPEKISAIRNFPVPQKTKHVRAFLG 540


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 13  AEVTKDCMDPEDDDGMIPY 69
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 13  AEVTKDCMDPEDDDGMIPY 69
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 323 YTNNIISTVLYNFLPLTVHTKV 388
           + N  + T  YNF   T+H+K+
Sbjct: 414 FFNIFLITPFYNFNENTIHSKL 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,745
Number of Sequences: 336
Number of extensions: 1941
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)