Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307C02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    54   4e-09
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   8.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.2  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 53.6 bits (123), Expect = 4e-09
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = +1

Query: 1   DSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 93
           D E+  V KDCMDPEDDDG IPYA FLKK+M
Sbjct: 120 DVELDNVMKDCMDPEDDDGNIPYAPFLKKMM 150


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 255 LRAPPEELSPPRALPAPVPQ 196
           LRAPP     P+  P+  PQ
Sbjct: 277 LRAPPSSQQQPQQQPSQQPQ 296


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 267 SAGWLRAPPEELSPPRALPAP 205
           + G L+ PP   S P + P+P
Sbjct: 862 TGGMLKMPPSSNSSPSSYPSP 882


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,079
Number of Sequences: 2352
Number of extensions: 8320
Number of successful extensions: 64
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)