Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307C01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6CBA4 Cluster: Similar to sp|P09230 Yarrowia lipolytic...    34   1.7  
UniRef50_Q7TPK2 Cluster: Ac2-120; n=1; Rattus norvegicus|Rep: Ac...    33   5.2  
UniRef50_A4IVU2 Cluster: Intracellular growth locus iglC; n=15; ...    32   9.2  

>UniRef50_Q6CBA4 Cluster: Similar to sp|P09230 Yarrowia lipolytica
           Alkaline extracellular protease; n=1; Yarrowia
           lipolytica|Rep: Similar to sp|P09230 Yarrowia lipolytica
           Alkaline extracellular protease - Yarrowia lipolytica
           (Candida lipolytica)
          Length = 512

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 16/51 (31%), Positives = 33/51 (64%)
 Frame = +1

Query: 82  SLYSHSVSQSALQSNKSKYSPAAADDKGLSSTSLNISFTRNW*NTRVT*VQ 234
           S   H++S+ A++ +K++   AAA + G ++ +LN  FT+NW   R++ ++
Sbjct: 159 SFNGHTLSKEAVEEDKTQADKAAALN-GFATVTLNKQFTKNWGLDRISHIE 208


>UniRef50_Q7TPK2 Cluster: Ac2-120; n=1; Rattus norvegicus|Rep: Ac2-120
            - Rattus norvegicus (Rat)
          Length = 2102

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +1

Query: 67   YDMIYSLYSHSVSQSALQSNKSKYSPAAADD-KGLSSTSLNI 189
            YD+ +  YS  +SQ++   ++S+ SP  +DD + + S+ LN+
Sbjct: 1122 YDLSHEFYSDDISQTSFFPDQSQKSPLTSDDGQAIPSSDLNL 1163


>UniRef50_A4IVU2 Cluster: Intracellular growth locus iglC; n=15;
           Proteobacteria|Rep: Intracellular growth locus iglC -
           Francisella tularensis subsp. tularensis (strain
           WY96-3418)
          Length = 211

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -2

Query: 130 FYLTVKPTD*LNDCKDCISYHIISL*LCTAGQRSLHI 20
           F ++++PT+ +   KD +SYHIIS+   T  Q SL +
Sbjct: 156 FSISIEPTELMGVSKDGMSYHIISIDGLTTSQGSLPV 192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,025,146
Number of Sequences: 1657284
Number of extensions: 8270239
Number of successful extensions: 16636
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16634
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)