Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307C01f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   3.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 186 YFIYQKLVKY--QSDLSSINCFPV 251
           Y +  K +KY   +DLSS NC P+
Sbjct: 676 YKLDLKNMKYTRSADLSSYNCVPI 699


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 304 KNINLDVCKNVFFAATSMTGKQFIELRSL 218
           +++++DVC N  + +  M  K  IE   L
Sbjct: 570 QSMDIDVCDNQTYTSLQMAMKNPIEFTDL 598


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 9   VCVPMCRDLCPA 44
           V VP C D CP+
Sbjct: 348 VIVPFCPDCCPS 359


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 9   VCVPMCRDLCPA 44
           V VP C D CP+
Sbjct: 348 VIVPFCPDCCPS 359


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 44  CWTKISTHRYTHA 6
           CW K  THR T A
Sbjct: 874 CWQKERTHRPTFA 886


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 9   VCVPMCRDLCPA 44
           V VP C D CP+
Sbjct: 348 VIVPFCPDCCPS 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,794
Number of Sequences: 438
Number of extensions: 2506
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)