Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307B10f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.        110   1e-24
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro...   110   1e-24
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,...   110   1e-24
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,...   110   1e-24
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P...    29   3.8  
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P...    29   3.8  
AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P...    29   3.8  

>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
          Length = 1893

 Score =  110 bits (265), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
 Frame = +3

Query: 198  TPGVIGAQEVYRDPRARRLAEQQARSTAQ----PIPEQLSFKEKMKMFALEAGDASTPKD 365
            TPGVIGAQEVYRDPR RRLAE+Q +   Q     +PE+LSFKEKMKMFALE+G+  TPKD
Sbjct: 1819 TPGVIGAQEVYRDPRTRRLAEKQQQQQQQRAGDAVPEKLSFKEKMKMFALESGEDKTPKD 1878

Query: 366  KVKISRAQRDIDAV 407
            K+KISRAQRDIDAV
Sbjct: 1879 KLKISRAQRDIDAV 1892


>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p protein.
          Length = 2051

 Score =  110 bits (265), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
 Frame = +3

Query: 198  TPGVIGAQEVYRDPRARRLAEQQARSTAQ----PIPEQLSFKEKMKMFALEAGDASTPKD 365
            TPGVIGAQEVYRDPR RRLAE+Q +   Q     +PE+LSFKEKMKMFALE+G+  TPKD
Sbjct: 1977 TPGVIGAQEVYRDPRTRRLAEKQQQQQQQRAGDAVPEKLSFKEKMKMFALESGEDKTPKD 2036

Query: 366  KVKISRAQRDIDAV 407
            K+KISRAQRDIDAV
Sbjct: 2037 KLKISRAQRDIDAV 2050


>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
            isoform A protein.
          Length = 2051

 Score =  110 bits (265), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
 Frame = +3

Query: 198  TPGVIGAQEVYRDPRARRLAEQQARSTAQ----PIPEQLSFKEKMKMFALEAGDASTPKD 365
            TPGVIGAQEVYRDPR RRLAE+Q +   Q     +PE+LSFKEKMKMFALE+G+  TPKD
Sbjct: 1977 TPGVIGAQEVYRDPRTRRLAEKQQQQQQQRAGDAVPEKLSFKEKMKMFALESGEDKTPKD 2036

Query: 366  KVKISRAQRDIDAV 407
            K+KISRAQRDIDAV
Sbjct: 2037 KLKISRAQRDIDAV 2050


>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
            isoform B protein.
          Length = 1882

 Score =  110 bits (265), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
 Frame = +3

Query: 198  TPGVIGAQEVYRDPRARRLAEQQARSTAQ----PIPEQLSFKEKMKMFALEAGDASTPKD 365
            TPGVIGAQEVYRDPR RRLAE+Q +   Q     +PE+LSFKEKMKMFALE+G+  TPKD
Sbjct: 1808 TPGVIGAQEVYRDPRTRRLAEKQQQQQQQRAGDAVPEKLSFKEKMKMFALESGEDKTPKD 1867

Query: 366  KVKISRAQRDIDAV 407
            K+KISRAQRDIDAV
Sbjct: 1868 KLKISRAQRDIDAV 1881


>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
           isoform A protein.
          Length = 4345

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +3

Query: 240 RARRLAEQQARSTAQPIPEQLSFKEKMKMFALEAGDASTPKDKVKISR 383
           R +R A++QAR++ + + E   F+E ++    +  D ST + K +I R
Sbjct: 789 RLKRKAQEQARASEEEVDEDYDFEESLEGNKRQKRDVSTTR-KQEIDR 835


>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
           isoform B protein.
          Length = 4374

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +3

Query: 240 RARRLAEQQARSTAQPIPEQLSFKEKMKMFALEAGDASTPKDKVKISR 383
           R +R A++QAR++ + + E   F+E ++    +  D ST + K +I R
Sbjct: 818 RLKRKAQEQARASEEEVDEDYDFEESLEGNKRQKRDVSTTR-KQEIDR 864


>AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA
           protein.
          Length = 5303

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 252 LAEQQARSTAQ--PIPEQLSFKEKMKMFALEAGDASTPKDKVKISRAQRDIDAV 407
           L E  AR T +  P P ++  +EK    A E     TPK K K + ++R ++ V
Sbjct: 329 LIEYLARKTGRICPKPNEIESREKALKKAEEEEQLLTPKKKAKTTGSKRKLEEV 382


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,676,274
Number of Sequences: 53049
Number of extensions: 218506
Number of successful extensions: 666
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)